| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150395304
Identifier: 150395304
GI number: 150395304
Start: 84285
End: 84995
Strand: Direct
Name: 150395304
Synonym: Smed_0076
Alternate gene names: NA
Gene position: 84285-84995 (Clockwise)
Preceding gene: 150395302
Following gene: 150395310
Centisome position: 2.23
GC content: 66.81
Gene sequence:
>711_bases ATGACGACGCAGAAGCCCGAAAGCGGGGATTCCCGCCGCGACGAGGTGATCGCGGGGGAGTACGTGCTCGGCGTCCTGTC GGCCGAGGATCGCCGCAAGGCCGAAGCGCGCATGGCAACGGACCGCAATTTCGCGGCCATGGTCGCTCGATGGCAAAACA ATCTTGCTGCCTTCGGCGACCCCTATGAAACGGTCGCGCCACGGCGCCGATACGGTGGCTCAGTCGGGCGCGGAGCCTTC GAAGAACGCCGAGGGGCGCACGACCAACGCGGTGTCTGGGGCTCGCTTGCTCTCTGGCGCAGCCTCGCCCTCGCATCGCT TTCGGCAATCGTCGTAATGGCCGGCGCGATGGCCGGACTTTTCAGCAGCCGCCCAGGCGGCACTCCGCTTGTGGCAAACC TCGAATCGTCTGGCGGCCCGGTCAACCTGGTCCTGCACTTCGAACCGGATACGGGACGCCTGTGGCTGTCGCCGACCGCC GCGGTAAGAGACAGATCGCTCGAACTCTGGCTGACCAAGGGCGACGATGCACCCGTCTCGCTCGGCGTGCTGCTGCCCCC GAGTGAAGGCGCAACCGTGCTCGAGCCGCGATTGCGTGGCCGAATAGCCCCGGGGTCCAGGCTTTTCGTAAGCGTCGAAC CACGGGGAGGATCGCCGAAAGGCGCGCCTACCGGAGCGGTCATCGCGCAAGGCATGGCGCGCGTCTTCTGA
Upstream 100 bases:
>100_bases TGCGGAACGAGATGATTGCGTTTCCGTTAATTGCGATGCGGATGCGTTGACGCGCGCTGCGGTTCCAGGACCATCGTGAT CTGAGAGAGTGCAGGGATCC
Downstream 100 bases:
>100_bases GCCGAGATCACGGTGCGTTGGAGCAGCGGGGATGCGATTGGAACCGCACGCGATTGTCATCCCGCTCCAGGGCTGCCCCT TGCCGCGCCGCGCAGCCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MTTQKPESGDSRRDEVIAGEYVLGVLSAEDRRKAEARMATDRNFAAMVARWQNNLAAFGDPYETVAPRRRYGGSVGRGAF EERRGAHDQRGVWGSLALWRSLALASLSAIVVMAGAMAGLFSSRPGGTPLVANLESSGGPVNLVLHFEPDTGRLWLSPTA AVRDRSLELWLTKGDDAPVSLGVLLPPSEGATVLEPRLRGRIAPGSRLFVSVEPRGGSPKGAPTGAVIAQGMARVF
Sequences:
>Translated_236_residues MTTQKPESGDSRRDEVIAGEYVLGVLSAEDRRKAEARMATDRNFAAMVARWQNNLAAFGDPYETVAPRRRYGGSVGRGAF EERRGAHDQRGVWGSLALWRSLALASLSAIVVMAGAMAGLFSSRPGGTPLVANLESSGGPVNLVLHFEPDTGRLWLSPTA AVRDRSLELWLTKGDDAPVSLGVLLPPSEGATVLEPRLRGRIAPGSRLFVSVEPRGGSPKGAPTGAVIAQGMARVF >Mature_235_residues TTQKPESGDSRRDEVIAGEYVLGVLSAEDRRKAEARMATDRNFAAMVARWQNNLAAFGDPYETVAPRRRYGGSVGRGAFE ERRGAHDQRGVWGSLALWRSLALASLSAIVVMAGAMAGLFSSRPGGTPLVANLESSGGPVNLVLHFEPDTGRLWLSPTAA VRDRSLELWLTKGDDAPVSLGVLLPPSEGATVLEPRLRGRIAPGSRLFVSVEPRGGSPKGAPTGAVIAQGMARVF
Specific function: Unknown
COG id: COG5343
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25090; Mature: 24959
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQKPESGDSRRDEVIAGEYVLGVLSAEDRRKAEARMATDRNFAAMVARWQNNLAAFGD CCCCCCCCCCCCCHHEEECHHEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC PYETVAPRRRYGGSVGRGAFEERRGAHDQRGVWGSLALWRSLALASLSAIVVMAGAMAGL CHHHHCCHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSSRPGGTPLVANLESSGGPVNLVLHFEPDTGRLWLSPTAAVRDRSLELWLTKGDDAPVS HCCCCCCCCEEEEECCCCCEEEEEEEEECCCCEEEECCHHHHCCCCEEEEEECCCCCCEE LGVLLPPSEGATVLEPRLRGRIAPGSRLFVSVEPRGGSPKGAPTGAVIAQGMARVF EEEEECCCCCCEEECHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure TTQKPESGDSRRDEVIAGEYVLGVLSAEDRRKAEARMATDRNFAAMVARWQNNLAAFGD CCCCCCCCCCCCHHEEECHHEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC PYETVAPRRRYGGSVGRGAFEERRGAHDQRGVWGSLALWRSLALASLSAIVVMAGAMAGL CHHHHCCHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSSRPGGTPLVANLESSGGPVNLVLHFEPDTGRLWLSPTAAVRDRSLELWLTKGDDAPVS HCCCCCCCCEEEEECCCCCEEEEEEEEECCCCEEEECCHHHHCCCCEEEEEECCCCCCEE LGVLLPPSEGATVLEPRLRGRIAPGSRLFVSVEPRGGSPKGAPTGAVIAQGMARVF EEEEECCCCCCEEECHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA