Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is tldD [C]

Identifier: 150401915

GI number: 150401915

Start: 1554386

End: 1555648

Strand: Reverse

Name: tldD [C]

Synonym: Maeo_1493

Alternate gene names: 150401915

Gene position: 1555648-1554386 (Counterclockwise)

Preceding gene: 150401916

Following gene: 150401914

Centisome position: 99.12

GC content: 32.54

Gene sequence:

>1263_bases
ATGGATTATTTAATAGATAAAATATTAAAAATTGGAGAAAAAAACAATTTTGAAGTAGATATTTACATCGAAAAAACAGA
CGGGATTAGTGCAGATTTAGACGGAGATAGTTTGGATTGTGTGGATATATCAAAAGATTTTGGTATTGGTGTAAGGGTAA
TAAAGGATAAAAAAGTAGGTTTTGCCTTCTCTTCGCAGGAAAATGAAAAGGTAATTTATAAAGCTATGGAAAATCTTGTA
TTTGACTCCTATACCACATTAGCACAACCCGAACCTAAATCAAAATATCCAAACCCAAAAGGAACATATTATAAAGAAAT
ATTAGATTTAGACGAAAACCAGCTAATAGAGGATTTAAGAGCTATGAAAAATATATTGGAGGAAAATAATATTACCATCA
CAGGCGGGGGCATAGGGAGCTCCATGGCACAAACCAGAATAATAAATTCAAATGGTGTAGATATAGAGGAAAAATATACA
CAATATTCCGCCTCTATTTCTGGGATAAATGAAAATGAAACGGCTTACGATTATTTAACCAAAAATAACAGGTTTAGCGT
AGAAGAATTGGCAAATAATACCGTAGAATTGTTAAAACTTCCAAAAAGCACAATTCAAAATTATGAGGGCAATATTATAT
TAAATCCAAGGGCTTTAAATTCATTATTGGGATATACACTTAAACCATCATTTAATGCCGAAAGTGTCCAAAGAAACAGG
TCTGTTTTAGCTGGAAAACTTGGAGAGGAAATATTTGGAGAAAATATAAATATTATTGATGATGGAACTATTGATAATGC
TCTTTATTCATCTAAGGCAGACGACGAGGGAACACCAACAAAAAGAACTGTTTTAGTAGAAAATGGGGTATTAAAAAGCT
ATTTATATGACATAAAACGGGCAAATATCGACAATACAGAAAGCACAGGAAATGGTTCAAGGGGCAGTAGTAGCCTACCA
AGTGTGGGGAGCTCCAACTTTATAATTGAGCCAGTTGATAAAATCGAGAATTATAACGAATACCTTATTATAAATACCCT
TATCGGTTGTCATACTTCAAACCCAATTACAGGAGATTTTTCCGTGGAAATATCCAACAGTTATATAGTTAAAGACGGAG
AGAAAATACCGCTTAAAAAAGGTATGCTATCAGGAAATATATTTGAAACATTTAAAACAGCAACCCCATTAGATAAAGTT
GAGCAGAGGGGGAGTTTAATAGCCCCTCCATTGTTAATAAATGGAAAGATAATTGTTAATTAA

Upstream 100 bases:

>100_bases
TTTTAATAATTTTTATTTTTATTTTTTCACGGCTTATTTATTTAATTAATTAAATTTACAACAATTAATAAACAAAATAA
TAAATTCAAATGGTGTAATA

Downstream 100 bases:

>100_bases
ATATTTTTTTTATTTTATAATAAATAATAATAAATATTTTGGTGAATAAAATGGGAGTGCAATTTAATGACTCAATTCCA
AAAAAGAACATATCAATAAC

Product: peptidase U62 modulator of DNA gyrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MDYLIDKILKIGEKNNFEVDIYIEKTDGISADLDGDSLDCVDISKDFGIGVRVIKDKKVGFAFSSQENEKVIYKAMENLV
FDSYTTLAQPEPKSKYPNPKGTYYKEILDLDENQLIEDLRAMKNILEENNITITGGGIGSSMAQTRIINSNGVDIEEKYT
QYSASISGINENETAYDYLTKNNRFSVEELANNTVELLKLPKSTIQNYEGNIILNPRALNSLLGYTLKPSFNAESVQRNR
SVLAGKLGEEIFGENINIIDDGTIDNALYSSKADDEGTPTKRTVLVENGVLKSYLYDIKRANIDNTESTGNGSRGSSSLP
SVGSSNFIIEPVDKIENYNEYLIINTLIGCHTSNPITGDFSVEISNSYIVKDGEKIPLKKGMLSGNIFETFKTATPLDKV
EQRGSLIAPPLLINGKIIVN

Sequences:

>Translated_420_residues
MDYLIDKILKIGEKNNFEVDIYIEKTDGISADLDGDSLDCVDISKDFGIGVRVIKDKKVGFAFSSQENEKVIYKAMENLV
FDSYTTLAQPEPKSKYPNPKGTYYKEILDLDENQLIEDLRAMKNILEENNITITGGGIGSSMAQTRIINSNGVDIEEKYT
QYSASISGINENETAYDYLTKNNRFSVEELANNTVELLKLPKSTIQNYEGNIILNPRALNSLLGYTLKPSFNAESVQRNR
SVLAGKLGEEIFGENINIIDDGTIDNALYSSKADDEGTPTKRTVLVENGVLKSYLYDIKRANIDNTESTGNGSRGSSSLP
SVGSSNFIIEPVDKIENYNEYLIINTLIGCHTSNPITGDFSVEISNSYIVKDGEKIPLKKGMLSGNIFETFKTATPLDKV
EQRGSLIAPPLLINGKIIVN
>Mature_420_residues
MDYLIDKILKIGEKNNFEVDIYIEKTDGISADLDGDSLDCVDISKDFGIGVRVIKDKKVGFAFSSQENEKVIYKAMENLV
FDSYTTLAQPEPKSKYPNPKGTYYKEILDLDENQLIEDLRAMKNILEENNITITGGGIGSSMAQTRIINSNGVDIEEKYT
QYSASISGINENETAYDYLTKNNRFSVEELANNTVELLKLPKSTIQNYEGNIILNPRALNSLLGYTLKPSFNAESVQRNR
SVLAGKLGEEIFGENINIIDDGTIDNALYSSKADDEGTPTKRTVLVENGVLKSYLYDIKRANIDNTESTGNGSRGSSSLP
SVGSSNFIIEPVDKIENYNEYLIINTLIGCHTSNPITGDFSVEISNSYIVKDGEKIPLKKGMLSGNIFETFKTATPLDKV
EQRGSLIAPPLLINGKIIVN

Specific function: Suppresses The Inhibitory Activity Of The Carbon Storage Regulator (Csra). [C]

COG id: COG0312

COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789640, Length=380, Percent_Identity=24.4736842105263, Blast_Score=82, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002510 [H]

Pfam domain/function: PF01523 PmbA_TldD [H]

EC number: NA

Molecular weight: Translated: 46434; Mature: 46434

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYLIDKILKIGEKNNFEVDIYIEKTDGISADLDGDSLDCVDISKDFGIGVRVIKDKKVG
CCHHHHHHHHHCCCCCEEEEEEEECCCCCEECCCCCCEEEEECCCCCCCEEEEEECCCCC
FAFSSQENEKVIYKAMENLVFDSYTTLAQPEPKSKYPNPKGTYYKEILDLDENQLIEDLR
EEECCCCCHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHH
AMKNILEENNITITGGGIGSSMAQTRIINSNGVDIEEKYTQYSASISGINENETAYDYLT
HHHHHHHHCCEEEEECCCCCCHHHEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHC
KNNRFSVEELANNTVELLKLPKSTIQNYEGNIILNPRALNSLLGYTLKPSFNAESVQRNR
CCCCCCHHHHHCCHHHHHHCCHHHHCCCCCCEEECHHHHHHHHCCCCCCCCCHHHHHHHH
SVLAGKLGEEIFGENINIIDDGTIDNALYSSKADDEGTPTKRTVLVENGVLKSYLYDIKR
HHHHHHHHHHHHCCCCCEEECCCCCHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHH
ANIDNTESTGNGSRGSSSLPSVGSSNFIIEPVDKIENYNEYLIINTLIGCHTSNPITGDF
CCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHCCCCCEEEEEEEEECCCCCCCCCEE
SVEISNSYIVKDGEKIPLKKGMLSGNIFETFKTATPLDKVEQRGSLIAPPLLINGKIIVN
EEEECCEEEEECCCCCCHHHCCCCCCHHHHHHCCCCHHHHHHCCCEECCCEEECCEEEEC
>Mature Secondary Structure
MDYLIDKILKIGEKNNFEVDIYIEKTDGISADLDGDSLDCVDISKDFGIGVRVIKDKKVG
CCHHHHHHHHHCCCCCEEEEEEEECCCCCEECCCCCCEEEEECCCCCCCEEEEEECCCCC
FAFSSQENEKVIYKAMENLVFDSYTTLAQPEPKSKYPNPKGTYYKEILDLDENQLIEDLR
EEECCCCCHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHH
AMKNILEENNITITGGGIGSSMAQTRIINSNGVDIEEKYTQYSASISGINENETAYDYLT
HHHHHHHHCCEEEEECCCCCCHHHEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHC
KNNRFSVEELANNTVELLKLPKSTIQNYEGNIILNPRALNSLLGYTLKPSFNAESVQRNR
CCCCCCHHHHHCCHHHHHHCCHHHHCCCCCCEEECHHHHHHHHCCCCCCCCCHHHHHHHH
SVLAGKLGEEIFGENINIIDDGTIDNALYSSKADDEGTPTKRTVLVENGVLKSYLYDIKR
HHHHHHHHHHHHCCCCCEEECCCCCHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHH
ANIDNTESTGNGSRGSSSLPSVGSSNFIIEPVDKIENYNEYLIINTLIGCHTSNPITGDF
CCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHCCCCCEEEEEEEEECCCCCCCCCEE
SVEISNSYIVKDGEKIPLKKGMLSGNIFETFKTATPLDKVEQRGSLIAPPLLINGKIIVN
EEEECCEEEEECCCCCCHHHCCCCCCHHHHHHCCCCHHHHHHCCCEECCCEEECCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]