| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is tldD [C]
Identifier: 150401915
GI number: 150401915
Start: 1554386
End: 1555648
Strand: Reverse
Name: tldD [C]
Synonym: Maeo_1493
Alternate gene names: 150401915
Gene position: 1555648-1554386 (Counterclockwise)
Preceding gene: 150401916
Following gene: 150401914
Centisome position: 99.12
GC content: 32.54
Gene sequence:
>1263_bases ATGGATTATTTAATAGATAAAATATTAAAAATTGGAGAAAAAAACAATTTTGAAGTAGATATTTACATCGAAAAAACAGA CGGGATTAGTGCAGATTTAGACGGAGATAGTTTGGATTGTGTGGATATATCAAAAGATTTTGGTATTGGTGTAAGGGTAA TAAAGGATAAAAAAGTAGGTTTTGCCTTCTCTTCGCAGGAAAATGAAAAGGTAATTTATAAAGCTATGGAAAATCTTGTA TTTGACTCCTATACCACATTAGCACAACCCGAACCTAAATCAAAATATCCAAACCCAAAAGGAACATATTATAAAGAAAT ATTAGATTTAGACGAAAACCAGCTAATAGAGGATTTAAGAGCTATGAAAAATATATTGGAGGAAAATAATATTACCATCA CAGGCGGGGGCATAGGGAGCTCCATGGCACAAACCAGAATAATAAATTCAAATGGTGTAGATATAGAGGAAAAATATACA CAATATTCCGCCTCTATTTCTGGGATAAATGAAAATGAAACGGCTTACGATTATTTAACCAAAAATAACAGGTTTAGCGT AGAAGAATTGGCAAATAATACCGTAGAATTGTTAAAACTTCCAAAAAGCACAATTCAAAATTATGAGGGCAATATTATAT TAAATCCAAGGGCTTTAAATTCATTATTGGGATATACACTTAAACCATCATTTAATGCCGAAAGTGTCCAAAGAAACAGG TCTGTTTTAGCTGGAAAACTTGGAGAGGAAATATTTGGAGAAAATATAAATATTATTGATGATGGAACTATTGATAATGC TCTTTATTCATCTAAGGCAGACGACGAGGGAACACCAACAAAAAGAACTGTTTTAGTAGAAAATGGGGTATTAAAAAGCT ATTTATATGACATAAAACGGGCAAATATCGACAATACAGAAAGCACAGGAAATGGTTCAAGGGGCAGTAGTAGCCTACCA AGTGTGGGGAGCTCCAACTTTATAATTGAGCCAGTTGATAAAATCGAGAATTATAACGAATACCTTATTATAAATACCCT TATCGGTTGTCATACTTCAAACCCAATTACAGGAGATTTTTCCGTGGAAATATCCAACAGTTATATAGTTAAAGACGGAG AGAAAATACCGCTTAAAAAAGGTATGCTATCAGGAAATATATTTGAAACATTTAAAACAGCAACCCCATTAGATAAAGTT GAGCAGAGGGGGAGTTTAATAGCCCCTCCATTGTTAATAAATGGAAAGATAATTGTTAATTAA
Upstream 100 bases:
>100_bases TTTTAATAATTTTTATTTTTATTTTTTCACGGCTTATTTATTTAATTAATTAAATTTACAACAATTAATAAACAAAATAA TAAATTCAAATGGTGTAATA
Downstream 100 bases:
>100_bases ATATTTTTTTTATTTTATAATAAATAATAATAAATATTTTGGTGAATAAAATGGGAGTGCAATTTAATGACTCAATTCCA AAAAAGAACATATCAATAAC
Product: peptidase U62 modulator of DNA gyrase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MDYLIDKILKIGEKNNFEVDIYIEKTDGISADLDGDSLDCVDISKDFGIGVRVIKDKKVGFAFSSQENEKVIYKAMENLV FDSYTTLAQPEPKSKYPNPKGTYYKEILDLDENQLIEDLRAMKNILEENNITITGGGIGSSMAQTRIINSNGVDIEEKYT QYSASISGINENETAYDYLTKNNRFSVEELANNTVELLKLPKSTIQNYEGNIILNPRALNSLLGYTLKPSFNAESVQRNR SVLAGKLGEEIFGENINIIDDGTIDNALYSSKADDEGTPTKRTVLVENGVLKSYLYDIKRANIDNTESTGNGSRGSSSLP SVGSSNFIIEPVDKIENYNEYLIINTLIGCHTSNPITGDFSVEISNSYIVKDGEKIPLKKGMLSGNIFETFKTATPLDKV EQRGSLIAPPLLINGKIIVN
Sequences:
>Translated_420_residues MDYLIDKILKIGEKNNFEVDIYIEKTDGISADLDGDSLDCVDISKDFGIGVRVIKDKKVGFAFSSQENEKVIYKAMENLV FDSYTTLAQPEPKSKYPNPKGTYYKEILDLDENQLIEDLRAMKNILEENNITITGGGIGSSMAQTRIINSNGVDIEEKYT QYSASISGINENETAYDYLTKNNRFSVEELANNTVELLKLPKSTIQNYEGNIILNPRALNSLLGYTLKPSFNAESVQRNR SVLAGKLGEEIFGENINIIDDGTIDNALYSSKADDEGTPTKRTVLVENGVLKSYLYDIKRANIDNTESTGNGSRGSSSLP SVGSSNFIIEPVDKIENYNEYLIINTLIGCHTSNPITGDFSVEISNSYIVKDGEKIPLKKGMLSGNIFETFKTATPLDKV EQRGSLIAPPLLINGKIIVN >Mature_420_residues MDYLIDKILKIGEKNNFEVDIYIEKTDGISADLDGDSLDCVDISKDFGIGVRVIKDKKVGFAFSSQENEKVIYKAMENLV FDSYTTLAQPEPKSKYPNPKGTYYKEILDLDENQLIEDLRAMKNILEENNITITGGGIGSSMAQTRIINSNGVDIEEKYT QYSASISGINENETAYDYLTKNNRFSVEELANNTVELLKLPKSTIQNYEGNIILNPRALNSLLGYTLKPSFNAESVQRNR SVLAGKLGEEIFGENINIIDDGTIDNALYSSKADDEGTPTKRTVLVENGVLKSYLYDIKRANIDNTESTGNGSRGSSSLP SVGSSNFIIEPVDKIENYNEYLIINTLIGCHTSNPITGDFSVEISNSYIVKDGEKIPLKKGMLSGNIFETFKTATPLDKV EQRGSLIAPPLLINGKIIVN
Specific function: Suppresses The Inhibitory Activity Of The Carbon Storage Regulator (Csra). [C]
COG id: COG0312
COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789640, Length=380, Percent_Identity=24.4736842105263, Blast_Score=82, Evalue=6e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002510 [H]
Pfam domain/function: PF01523 PmbA_TldD [H]
EC number: NA
Molecular weight: Translated: 46434; Mature: 46434
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYLIDKILKIGEKNNFEVDIYIEKTDGISADLDGDSLDCVDISKDFGIGVRVIKDKKVG CCHHHHHHHHHCCCCCEEEEEEEECCCCCEECCCCCCEEEEECCCCCCCEEEEEECCCCC FAFSSQENEKVIYKAMENLVFDSYTTLAQPEPKSKYPNPKGTYYKEILDLDENQLIEDLR EEECCCCCHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHH AMKNILEENNITITGGGIGSSMAQTRIINSNGVDIEEKYTQYSASISGINENETAYDYLT HHHHHHHHCCEEEEECCCCCCHHHEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHC KNNRFSVEELANNTVELLKLPKSTIQNYEGNIILNPRALNSLLGYTLKPSFNAESVQRNR CCCCCCHHHHHCCHHHHHHCCHHHHCCCCCCEEECHHHHHHHHCCCCCCCCCHHHHHHHH SVLAGKLGEEIFGENINIIDDGTIDNALYSSKADDEGTPTKRTVLVENGVLKSYLYDIKR HHHHHHHHHHHHCCCCCEEECCCCCHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHH ANIDNTESTGNGSRGSSSLPSVGSSNFIIEPVDKIENYNEYLIINTLIGCHTSNPITGDF CCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHCCCCCEEEEEEEEECCCCCCCCCEE SVEISNSYIVKDGEKIPLKKGMLSGNIFETFKTATPLDKVEQRGSLIAPPLLINGKIIVN EEEECCEEEEECCCCCCHHHCCCCCCHHHHHHCCCCHHHHHHCCCEECCCEEECCEEEEC >Mature Secondary Structure MDYLIDKILKIGEKNNFEVDIYIEKTDGISADLDGDSLDCVDISKDFGIGVRVIKDKKVG CCHHHHHHHHHCCCCCEEEEEEEECCCCCEECCCCCCEEEEECCCCCCCEEEEEECCCCC FAFSSQENEKVIYKAMENLVFDSYTTLAQPEPKSKYPNPKGTYYKEILDLDENQLIEDLR EEECCCCCHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHH AMKNILEENNITITGGGIGSSMAQTRIINSNGVDIEEKYTQYSASISGINENETAYDYLT HHHHHHHHCCEEEEECCCCCCHHHEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHC KNNRFSVEELANNTVELLKLPKSTIQNYEGNIILNPRALNSLLGYTLKPSFNAESVQRNR CCCCCCHHHHHCCHHHHHHCCHHHHCCCCCCEEECHHHHHHHHCCCCCCCCCHHHHHHHH SVLAGKLGEEIFGENINIIDDGTIDNALYSSKADDEGTPTKRTVLVENGVLKSYLYDIKR HHHHHHHHHHHHCCCCCEEECCCCCHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHH ANIDNTESTGNGSRGSSSLPSVGSSNFIIEPVDKIENYNEYLIINTLIGCHTSNPITGDF CCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHCCCCCEEEEEEEEECCCCCCCCCEE SVEISNSYIVKDGEKIPLKKGMLSGNIFETFKTATPLDKVEQRGSLIAPPLLINGKIIVN EEEECCEEEEECCCCCCHHHCCCCCCHHHHHHCCCCHHHHHHCCCEECCCEEECCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]