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The map label for this gene is yebU [C]

Identifier: 150401879

GI number: 150401879

Start: 1515603

End: 1516610

Strand: Direct

Name: yebU [C]

Synonym: Maeo_1457

Alternate gene names: 150401879

Gene position: 1515603-1516610 (Clockwise)

Preceding gene: 150401878

Following gene: 150401880

Centisome position: 96.57

GC content: 27.28

Gene sequence:

>1008_bases
ATGAGAAAAAAATTTAACAGTAAAAGCAAAGGCAAAAATTTACATGCCAGTCGAGAAAATAAAGATAAAGATAATAAAAT
AAATAAAAATAAAGACAATAAAAGCAAAAATATTAAAAATACCAATAAAAATATTAAAGGCAAAGGCAAAAACGACCAAA
ACAAAAATAAGGACAATAAAAAAAGTAAGGATACAAATAAAGATAAAACACCAACTACACAATATATTAGAGTAAATACC
TTAAAAATAACACCCGAAAAGCTAAAAGCTCGACTTACAGATAAGGGAATAGAATTAGAGGATACATTTTTAGAATATTT
ATTCAAAATAAAAAATACAAAAGTTCCAGTTGGAGCAACACCAGAATATTTATTTGGATATTATTATTTACAAAGTATAT
CCTCCGTAATTCCGTCTTTGGTGTTAAATCCTTCTGAAAAGGATATGGTTCTTGATATGTGTTCAGCTCCAGGGGGGAAA
ACCACACATTTATGCCAATTAATGAATAATAAGGGAATTGTTGTAGCTAATGAAGTGAATAGAAAAAGAATTAAAAGCTT
AAAATCAAATATATTTAGAATGAATATAACAAATACAATAATATTAAATAGCGATGCCCTTAGGTTGAAGTATTTTAATT
CGTTTGATAAAATATTATTAGATGCCCCCTGTTCTGGAAATGATATAAAGGATAAAAATAGGGAGGTTAGCAAAAGAGAT
ATACGATACTGCTCTTTAAGGCAGAAAAACATGATAAATATAGGTATAGAATTATTAAAAACAGGTGGGGAATTGGTTTA
TAGTACCTGTTCGGCGGAAATTGAAGAAAATGAAGAAGTAATAGAATATATATTGAGTATGAGAAAAGATATTGAATTAA
TAAATATATCTAATTTTAAAGATACGATTACAGGAATTAGCGTAGTTGATGGCGAAGTAAATGGCACAATAAAGGTAATT
CCACCAAATGAGCCATTTTTTATAGCTAAAATTAGAAAAATACAATAA

Upstream 100 bases:

>100_bases
ATACATATGATACATGATATTATTGGATTTATAACTGCACCAACTTTAACAGTTATGGCTTCAATGATTTATTTAAAGTT
AATTAATATAAGTGATACTA

Downstream 100 bases:

>100_bases
ATTAAACATGAATAATATTATTATATAATATTTATATGATATTAATAATAATATGGGGAAAATAATGGAAATAATAACAA
TAGATGGGAGTTATGGCGAA

Product: NOL1/NOP2/sun family RNA methylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MRKKFNSKSKGKNLHASRENKDKDNKINKNKDNKSKNIKNTNKNIKGKGKNDQNKNKDNKKSKDTNKDKTPTTQYIRVNT
LKITPEKLKARLTDKGIELEDTFLEYLFKIKNTKVPVGATPEYLFGYYYLQSISSVIPSLVLNPSEKDMVLDMCSAPGGK
TTHLCQLMNNKGIVVANEVNRKRIKSLKSNIFRMNITNTIILNSDALRLKYFNSFDKILLDAPCSGNDIKDKNREVSKRD
IRYCSLRQKNMINIGIELLKTGGELVYSTCSAEIEENEEVIEYILSMRKDIELINISNFKDTITGISVVDGEVNGTIKVI
PPNEPFFIAKIRKIQ

Sequences:

>Translated_335_residues
MRKKFNSKSKGKNLHASRENKDKDNKINKNKDNKSKNIKNTNKNIKGKGKNDQNKNKDNKKSKDTNKDKTPTTQYIRVNT
LKITPEKLKARLTDKGIELEDTFLEYLFKIKNTKVPVGATPEYLFGYYYLQSISSVIPSLVLNPSEKDMVLDMCSAPGGK
TTHLCQLMNNKGIVVANEVNRKRIKSLKSNIFRMNITNTIILNSDALRLKYFNSFDKILLDAPCSGNDIKDKNREVSKRD
IRYCSLRQKNMINIGIELLKTGGELVYSTCSAEIEENEEVIEYILSMRKDIELINISNFKDTITGISVVDGEVNGTIKVI
PPNEPFFIAKIRKIQ
>Mature_335_residues
MRKKFNSKSKGKNLHASRENKDKDNKINKNKDNKSKNIKNTNKNIKGKGKNDQNKNKDNKKSKDTNKDKTPTTQYIRVNT
LKITPEKLKARLTDKGIELEDTFLEYLFKIKNTKVPVGATPEYLFGYYYLQSISSVIPSLVLNPSEKDMVLDMCSAPGGK
TTHLCQLMNNKGIVVANEVNRKRIKSLKSNIFRMNITNTIILNSDALRLKYFNSFDKILLDAPCSGNDIKDKNREVSKRD
IRYCSLRQKNMINIGIELLKTGGELVYSTCSAEIEENEEVIEYILSMRKDIELINISNFKDTITGISVVDGEVNGTIKVI
PPNEPFFIAKIRKIQ

Specific function: May act as RNA methyltransferase [H]

COG id: COG0144

COG function: function code J; tRNA and rRNA cytosine-C5-methylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmB/NOP family [H]

Homologues:

Organism=Homo sapiens, GI76150625, Length=232, Percent_Identity=40.948275862069, Blast_Score=188, Evalue=6e-48,
Organism=Homo sapiens, GI76150623, Length=232, Percent_Identity=40.948275862069, Blast_Score=188, Evalue=6e-48,
Organism=Homo sapiens, GI32698918, Length=196, Percent_Identity=32.6530612244898, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI301336155, Length=203, Percent_Identity=33.0049261083744, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI39995082, Length=203, Percent_Identity=33.0049261083744, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI11545785, Length=225, Percent_Identity=30.2222222222222, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI23199998, Length=229, Percent_Identity=26.6375545851528, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI270288816, Length=229, Percent_Identity=26.6375545851528, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI8922322, Length=229, Percent_Identity=26.6375545851528, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI270288818, Length=229, Percent_Identity=26.6375545851528, Blast_Score=88, Evalue=1e-17,
Organism=Escherichia coli, GI87081985, Length=286, Percent_Identity=33.2167832167832, Blast_Score=138, Evalue=6e-34,
Organism=Escherichia coli, GI2367212, Length=187, Percent_Identity=32.620320855615, Blast_Score=101, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI17536757, Length=261, Percent_Identity=37.9310344827586, Blast_Score=177, Evalue=7e-45,
Organism=Caenorhabditis elegans, GI25143471, Length=172, Percent_Identity=36.046511627907, Blast_Score=97, Evalue=9e-21,
Organism=Caenorhabditis elegans, GI71998419, Length=267, Percent_Identity=28.8389513108614, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI115534021, Length=169, Percent_Identity=30.7692307692308, Blast_Score=81, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17509941, Length=242, Percent_Identity=26.4462809917355, Blast_Score=69, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6324268, Length=291, Percent_Identity=38.8316151202749, Blast_Score=187, Evalue=2e-48,
Organism=Saccharomyces cerevisiae, GI6319447, Length=198, Percent_Identity=36.8686868686869, Blast_Score=103, Evalue=3e-23,
Organism=Drosophila melanogaster, GI22024126, Length=224, Percent_Identity=39.7321428571429, Blast_Score=177, Evalue=7e-45,
Organism=Drosophila melanogaster, GI21356513, Length=192, Percent_Identity=32.2916666666667, Blast_Score=98, Evalue=8e-21,
Organism=Drosophila melanogaster, GI24668781, Length=192, Percent_Identity=32.2916666666667, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI21355201, Length=181, Percent_Identity=33.7016574585635, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI21356579, Length=175, Percent_Identity=28.5714285714286, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI19920494, Length=175, Percent_Identity=30.2857142857143, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001678
- InterPro:   IPR018314
- InterPro:   IPR011023 [H]

Pfam domain/function: PF01189 Nol1_Nop2_Fmu [H]

EC number: NA

Molecular weight: Translated: 38194; Mature: 38194

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: PS01153 NOL1_NOP2_SUN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKFNSKSKGKNLHASRENKDKDNKINKNKDNKSKNIKNTNKNIKGKGKNDQNKNKDNK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KSKDTNKDKTPTTQYIRVNTLKITPEKLKARLTDKGIELEDTFLEYLFKIKNTKVPVGAT
CCCCCCCCCCCCEEEEEEEEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCC
PEYLFGYYYLQSISSVIPSLVLNPSEKDMVLDMCSAPGGKTTHLCQLMNNKGIVVANEVN
HHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHCCCCCCHHHHHHHHCCCCEEEECCCC
RKRIKSLKSNIFRMNITNTIILNSDALRLKYFNSFDKILLDAPCSGNDIKDKNREVSKRD
HHHHHHHHHCEEEEECCEEEEECCCCEEEEECCCCCCEEEECCCCCCCCCCCCCHHHHHH
IRYCSLRQKNMINIGIELLKTGGELVYSTCSAEIEENEEVIEYILSMRKDIELINISNFK
HHHHHHCCCCHHHHHHHHHHCCCCEEEEHHCCCCCCCHHHHHHHHHHHCCCEEEEECCCH
DTITGISVVDGEVNGTIKVIPPNEPFFIAKIRKIQ
HHHCCEEEEECCCCCEEEEECCCCCEEEEEEEECC
>Mature Secondary Structure
MRKKFNSKSKGKNLHASRENKDKDNKINKNKDNKSKNIKNTNKNIKGKGKNDQNKNKDNK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KSKDTNKDKTPTTQYIRVNTLKITPEKLKARLTDKGIELEDTFLEYLFKIKNTKVPVGAT
CCCCCCCCCCCCEEEEEEEEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCC
PEYLFGYYYLQSISSVIPSLVLNPSEKDMVLDMCSAPGGKTTHLCQLMNNKGIVVANEVN
HHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHCCCCCCHHHHHHHHCCCCEEEECCCC
RKRIKSLKSNIFRMNITNTIILNSDALRLKYFNSFDKILLDAPCSGNDIKDKNREVSKRD
HHHHHHHHHCEEEEECCEEEEECCCCEEEEECCCCCCEEEECCCCCCCCCCCCCHHHHHH
IRYCSLRQKNMINIGIELLKTGGELVYSTCSAEIEENEEVIEYILSMRKDIELINISNFK
HHHHHHCCCCHHHHHHHHHHCCCCEEEEHHCCCCCCCHHHHHHHHHHHCCCEEEEECCCH
DTITGISVVDGEVNGTIKVIPPNEPFFIAKIRKIQ
HHHCCEEEEECCCCCEEEEECCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]