| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is yjiL [C]
Identifier: 150401769
GI number: 150401769
Start: 1409135
End: 1409875
Strand: Reverse
Name: yjiL [C]
Synonym: Maeo_1347
Alternate gene names: 150401769
Gene position: 1409875-1409135 (Counterclockwise)
Preceding gene: 150401770
Following gene: 150401768
Centisome position: 89.83
GC content: 28.34
Gene sequence:
>741_bases ATGATTTTAGGCATAGATATTGGTTCTACAACAACCAAATTAGTTTTAATGGATAATTCTGACAATAATAAAATAATAAC CCATTTAGTAAGAAATATGGGCGTAATTATTGAAGAAAATGACATTATAAATGAAATAAAAGAGTTTGAAAAAAAATATT CAATAGATAAAATAGTAGCAACAGGATATGGGAGACATAAATTATCTTTTGCAGATAAAATAGTTCCCGAAGTTTTAGCG TTGGGAGCTGGTGCAAATTACTTTTTTAAGGACATTGACGGAGTTATAGATATCGGGGGTCAGGATTGCAAAGTTTTAAA AGTAAATGACAAAGGAAAAGTAGTTGATTTTATATTATCAGATAAATGTGCCGCAGGAACTGGCAAATTTATGGAAAAGT GTCTAAATATACTAAATATACAGGACGATTTAAACAATTATTATTCTGATAATATTGTAGATATATCCTCTATGTGTGTA GTTTTTGCAGAAAGTGAAATAATATCGCTATTGTCTAAAAAAACGCCAAAAGAAGATATTTTAATGGGTGTTTATAATAG TATTGCAAATAGAATTACACCAATGGCAAACAAATTAAAAATAAACAACATCGTATTTAGTGGAGGTGTTGCAAAAAATA ATATTTTAGCGGGCGTTTTAGAAAACAAACTAAATAAAAAACTTTTAATTCCTGAAAATCCACAAATTGTTTGTTGTACG GGGGCTTGTTTAATGATTTAA
Upstream 100 bases:
>100_bases GGTGGCGAAAACAAAACCATATTCATAATTATAATCCATTCCACTTAATTATTTTGGACTAATGGGACAGTTTTTGAACT TACTATAATTGGTGATAAAT
Downstream 100 bases:
>100_bases TACTTAATTTTATTATAATATATTTTATTATTTTATTTTTTATCCGTGTTAATTCATAGTATGTTAGAGAACTATGTACA GTAATAAATGTTGTACTTAG
Product: putative CoA-substrate-specific enzyme activase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MILGIDIGSTTTKLVLMDNSDNNKIITHLVRNMGVIIEENDIINEIKEFEKKYSIDKIVATGYGRHKLSFADKIVPEVLA LGAGANYFFKDIDGVIDIGGQDCKVLKVNDKGKVVDFILSDKCAAGTGKFMEKCLNILNIQDDLNNYYSDNIVDISSMCV VFAESEIISLLSKKTPKEDILMGVYNSIANRITPMANKLKINNIVFSGGVAKNNILAGVLENKLNKKLLIPENPQIVCCT GACLMI
Sequences:
>Translated_246_residues MILGIDIGSTTTKLVLMDNSDNNKIITHLVRNMGVIIEENDIINEIKEFEKKYSIDKIVATGYGRHKLSFADKIVPEVLA LGAGANYFFKDIDGVIDIGGQDCKVLKVNDKGKVVDFILSDKCAAGTGKFMEKCLNILNIQDDLNNYYSDNIVDISSMCV VFAESEIISLLSKKTPKEDILMGVYNSIANRITPMANKLKINNIVFSGGVAKNNILAGVLENKLNKKLLIPENPQIVCCT GACLMI >Mature_246_residues MILGIDIGSTTTKLVLMDNSDNNKIITHLVRNMGVIIEENDIINEIKEFEKKYSIDKIVATGYGRHKLSFADKIVPEVLA LGAGANYFFKDIDGVIDIGGQDCKVLKVNDKGKVVDFILSDKCAAGTGKFMEKCLNILNIQDDLNNYYSDNIVDISSMCV VFAESEIISLLSKKTPKEDILMGVYNSIANRITPMANKLKINNIVFSGGVAKNNILAGVLENKLNKKLLIPENPQIVCCT GACLMI
Specific function: Unknown
COG id: COG1924
COG function: function code I; Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082426, Length=248, Percent_Identity=35.8870967741936, Blast_Score=141, Evalue=4e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002731 - InterPro: IPR008275 [H]
Pfam domain/function: PF01869 BcrAD_BadFG [H]
EC number: NA
Molecular weight: Translated: 26996; Mature: 26996
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILGIDIGSTTTKLVLMDNSDNNKIITHLVRNMGVIIEENDIINEIKEFEKKYSIDKIVA CEEEEECCCCEEEEEEEECCCCCHHHHHHHHHCCEEEECCHHHHHHHHHHHHHCHHHHHC TGYGRHKLSFADKIVPEVLALGAGANYFFKDIDGVIDIGGQDCKVLKVNDKGKVVDFILS CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCEEECCCCCEEEEEECCCCCEEEEEEC DKCAAGTGKFMEKCLNILNIQDDLNNYYSDNIVDISSMCVVFAESEIISLLSKKTPKEDI CCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHH LMGVYNSIANRITPMANKLKINNIVFSGGVAKNNILAGVLENKLNKKLLIPENPQIVCCT HHHHHHHHHHHHCCCHHHEEEEEEEEECCCCCCHHHHHHHHHHCCCEEECCCCCCEEEEC GACLMI CCEECC >Mature Secondary Structure MILGIDIGSTTTKLVLMDNSDNNKIITHLVRNMGVIIEENDIINEIKEFEKKYSIDKIVA CEEEEECCCCEEEEEEEECCCCCHHHHHHHHHCCEEEECCHHHHHHHHHHHHHCHHHHHC TGYGRHKLSFADKIVPEVLALGAGANYFFKDIDGVIDIGGQDCKVLKVNDKGKVVDFILS CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCEEECCCCCEEEEEECCCCCEEEEEEC DKCAAGTGKFMEKCLNILNIQDDLNNYYSDNIVDISSMCVVFAESEIISLLSKKTPKEDI CCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHH LMGVYNSIANRITPMANKLKINNIVFSGGVAKNNILAGVLENKLNKKLLIPENPQIVCCT HHHHHHHHHHHHCCCHHHEEEEEEEEECCCCCCHHHHHHHHHHCCCEEECCCCCCEEEEC GACLMI CCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]