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The map label for this gene is yjiM [C]

Identifier: 150401768

GI number: 150401768

Start: 1407627

End: 1408745

Strand: Reverse

Name: yjiM [C]

Synonym: Maeo_1346

Alternate gene names: 150401768

Gene position: 1408745-1407627 (Counterclockwise)

Preceding gene: 150401769

Following gene: 150401767

Centisome position: 89.76

GC content: 29.4

Gene sequence:

>1119_bases
ATGGAATTAAAGGCCATGAATAATTTAATGACTAAATTTTCAAATAGAAAAAATCAATTATATGGAGAAAAAGAAGAAGG
TAAAAAAGTATTTGGTCTTTTTTGCTCATTTGTTCCTATTGAATTAGTTTTAGCATCAAATTCAATCCCTGTTGGATTAT
GTGGTGGGAAAAATGATACAATAGCAATAGCTGAAGAAGATTTGCCAAGAAATATTTGTCCCCTTGTAAAATCTTCCTAT
GGATTTAAAAAGGCAAAATCATGCCCATATTTTGAAGCTGCTGATGTAGTTATTGGAGAAACCACATGCGATGCAAAAAA
GAAAATGTTTGAATTATTGGAAAACCTTGTTAATACCCATGTTATGCAACTTCCCCATTTTAAAGATGAAAAATCATTAA
ATTTATGGATAAGTGAAGTAGAGGAATTAAAAGAACTTATTGAAAAGGAAAGTGGAAACACCATAACAGAAGAAGCATTA
AAAGAAGCAGTTGATAAAGTAAATAAAATGAGAAAATTATTTTATAAGATATATGATTTACGAGCAAATCACCCATCACC
AATAAAAGGTAGCGATACATTAAAATTATTCCAATTTGCTTATTTATTAGATATTAATGATACAATTGAAGTTTTAGAAG
AATTAATTCCTGAATTGGAAGATAGAGTAAATAATAAGGAAGGATACACAGGAAAAAGAATATTGATAACAGGTTGCCCG
ATGGTGGCAGGAAATACAAAAATAGTAGATTTAATTGAAGAATGTAATGGTATTGTCGTAGGGGAAGAAAGTTGTACGGG
AACAAGGCAATTTGAAAATCTTGTAGAAGGATATACTGTAAAAGATTTGGCTGAAAGATACTTTAAAATCCCTTGTGCAG
TGGCATACAAAAATGAAGAAAGAATTAAAAGAATTAAAGAATTAGTTAAAGAATTAAATGTCGATGGTGTTGTATATTAT
ACACTTCAATACTGCCATACATTCAATGTAGAGGGGGCCAAAATAGAAAAGGAATTGAAAGAAGAAAATATTCCAATAAT
AAGAATTGAAACTGATTATTCTGAAAGCGATAAAGAACAGCTTAAAACACGATTGGAAGCATTTATTGAAATGATTTAA

Upstream 100 bases:

>100_bases
AAATAATAAATATTTCAAAAATATTGCATATTAGAAAATCTAATATACAATATACAGTTGAATTAAATAATAAATAAATG
ATTTTTGGTTTGGTGAAACT

Downstream 100 bases:

>100_bases
AATATTATTTATTTTATTCTATTTTATTAATTATTATTTATTTAATATCAAAGTGAAATTATCAATACAAATTATAAATA
TATTATTGGATTATTAATTA

Product: 2-hydroxyglutaryl-CoA dehydratase D-component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MELKAMNNLMTKFSNRKNQLYGEKEEGKKVFGLFCSFVPIELVLASNSIPVGLCGGKNDTIAIAEEDLPRNICPLVKSSY
GFKKAKSCPYFEAADVVIGETTCDAKKKMFELLENLVNTHVMQLPHFKDEKSLNLWISEVEELKELIEKESGNTITEEAL
KEAVDKVNKMRKLFYKIYDLRANHPSPIKGSDTLKLFQFAYLLDINDTIEVLEELIPELEDRVNNKEGYTGKRILITGCP
MVAGNTKIVDLIEECNGIVVGEESCTGTRQFENLVEGYTVKDLAERYFKIPCAVAYKNEERIKRIKELVKELNVDGVVYY
TLQYCHTFNVEGAKIEKELKEENIPIIRIETDYSESDKEQLKTRLEAFIEMI

Sequences:

>Translated_372_residues
MELKAMNNLMTKFSNRKNQLYGEKEEGKKVFGLFCSFVPIELVLASNSIPVGLCGGKNDTIAIAEEDLPRNICPLVKSSY
GFKKAKSCPYFEAADVVIGETTCDAKKKMFELLENLVNTHVMQLPHFKDEKSLNLWISEVEELKELIEKESGNTITEEAL
KEAVDKVNKMRKLFYKIYDLRANHPSPIKGSDTLKLFQFAYLLDINDTIEVLEELIPELEDRVNNKEGYTGKRILITGCP
MVAGNTKIVDLIEECNGIVVGEESCTGTRQFENLVEGYTVKDLAERYFKIPCAVAYKNEERIKRIKELVKELNVDGVVYY
TLQYCHTFNVEGAKIEKELKEENIPIIRIETDYSESDKEQLKTRLEAFIEMI
>Mature_372_residues
MELKAMNNLMTKFSNRKNQLYGEKEEGKKVFGLFCSFVPIELVLASNSIPVGLCGGKNDTIAIAEEDLPRNICPLVKSSY
GFKKAKSCPYFEAADVVIGETTCDAKKKMFELLENLVNTHVMQLPHFKDEKSLNLWISEVEELKELIEKESGNTITEEAL
KEAVDKVNKMRKLFYKIYDLRANHPSPIKGSDTLKLFQFAYLLDINDTIEVLEELIPELEDRVNNKEGYTGKRILITGCP
MVAGNTKIVDLIEECNGIVVGEESCTGTRQFENLVEGYTVKDLAERYFKIPCAVAYKNEERIKRIKELVKELNVDGVVYY
TLQYCHTFNVEGAKIEKELKEENIPIIRIETDYSESDKEQLKTRLEAFIEMI

Specific function: Unknown

COG id: COG1775

COG function: function code E; Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjiM [H]

Homologues:

Organism=Escherichia coli, GI87082427, Length=355, Percent_Identity=41.9718309859155, Blast_Score=284, Evalue=7e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010327 [H]

Pfam domain/function: PF06050 HGD-D [H]

EC number: NA

Molecular weight: Translated: 42490; Mature: 42490

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELKAMNNLMTKFSNRKNQLYGEKEEGKKVFGLFCSFVPIELVLASNSIPVGLCGGKNDT
CCHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECCCCCE
IAIAEEDLPRNICPLVKSSYGFKKAKSCPYFEAADVVIGETTCDAKKKMFELLENLVNTH
EEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHH
VMQLPHFKDEKSLNLWISEVEELKELIEKESGNTITEEALKEAVDKVNKMRKLFYKIYDL
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RANHPSPIKGSDTLKLFQFAYLLDINDTIEVLEELIPELEDRVNNKEGYTGKRILITGCP
CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECC
MVAGNTKIVDLIEECNGIVVGEESCTGTRQFENLVEGYTVKDLAERYFKIPCAVAYKNEE
EECCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCHH
RIKRIKELVKELNVDGVVYYTLQYCHTFNVEGAKIEKELKEENIPIIRIETDYSESDKEQ
HHHHHHHHHHHCCCCCEEEEEEEHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHH
LKTRLEAFIEMI
HHHHHHHHHHCC
>Mature Secondary Structure
MELKAMNNLMTKFSNRKNQLYGEKEEGKKVFGLFCSFVPIELVLASNSIPVGLCGGKNDT
CCHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECCCCCE
IAIAEEDLPRNICPLVKSSYGFKKAKSCPYFEAADVVIGETTCDAKKKMFELLENLVNTH
EEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHH
VMQLPHFKDEKSLNLWISEVEELKELIEKESGNTITEEALKEAVDKVNKMRKLFYKIYDL
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RANHPSPIKGSDTLKLFQFAYLLDINDTIEVLEELIPELEDRVNNKEGYTGKRILITGCP
CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECC
MVAGNTKIVDLIEECNGIVVGEESCTGTRQFENLVEGYTVKDLAERYFKIPCAVAYKNEE
EECCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCHH
RIKRIKELVKELNVDGVVYYTLQYCHTFNVEGAKIEKELKEENIPIIRIETDYSESDKEQ
HHHHHHHHHHHCCCCCEEEEEEEHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHH
LKTRLEAFIEMI
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]