| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is fkpB [C]
Identifier: 150401750
GI number: 150401750
Start: 1391003
End: 1391593
Strand: Reverse
Name: fkpB [C]
Synonym: Maeo_1328
Alternate gene names: 150401750
Gene position: 1391593-1391003 (Counterclockwise)
Preceding gene: 150401751
Following gene: 150401749
Centisome position: 88.66
GC content: 30.46
Gene sequence:
>591_bases ATGAAAAATTTAACTGTATTCGGATTAATATCCATTATTTTATTGTTGGGATTTTCGGGTTGTGTGGATAATACAAATAA AGGAGCTCCCATTGAAAATCCACCCCAATCAAAGATTTGTGAATTTCCTTATGGAAATGGAACAATTGTATCTGTGGATT ATATTGGAAAGTTCGAAAATGGAACAATATTTGATACATCAATTGAACAGGTTGCAAAAGAGGCAAATATATACAATCCA CAGAGAAACTACAAACCAATAGAATTCACAATAGGAAAGGGGCAAATGATTAAAGGATTTGAAAATGCCGTATTAAATAT GTCAGAAGGAGAAGAAAAAACTATAATATTGCCCCCTAATGAAGCATACGGAGAAATAAATAAATCTTATATCGTGCCAT ATCCAATAGAAATATTTAACAATACAAATATTACTCCAAAAAAAGGAATGAGATTATATATTAGGGGAGCTCCCGTTAAA ATAGCGGAAGTAAATGAAACTACTGTATTATTAGATTTTAATCACCCAATGGCAGGAAAAACATTGGTATTCGATATTAA ATTGATAAATATCACAATACCCCAAAAATAA
Upstream 100 bases:
>100_bases GCGACTGTCATTAATTAATTTTATAATTATTTTTATTTTTTTATTTTATTAATTATTTTATTGTCATATTGTATTTTTTT ATTTTAATGTGTGATATTTT
Downstream 100 bases:
>100_bases TCGAAATAGGGGAATAATATAATAAATTTCTATTTTTTTAAATATTTTTTCTTTTTTAAAGTAGCTTTTTAAATTTTATA ATAATATATATTCTTTACTA
Product: peptidylprolyl isomerase FKBP-type
Products: NA
Alternate protein names: PPIase; MtFK; Rotamase [H]
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MKNLTVFGLISIILLLGFSGCVDNTNKGAPIENPPQSKICEFPYGNGTIVSVDYIGKFENGTIFDTSIEQVAKEANIYNP QRNYKPIEFTIGKGQMIKGFENAVLNMSEGEEKTIILPPNEAYGEINKSYIVPYPIEIFNNTNITPKKGMRLYIRGAPVK IAEVNETTVLLDFNHPMAGKTLVFDIKLINITIPQK
Sequences:
>Translated_196_residues MKNLTVFGLISIILLLGFSGCVDNTNKGAPIENPPQSKICEFPYGNGTIVSVDYIGKFENGTIFDTSIEQVAKEANIYNP QRNYKPIEFTIGKGQMIKGFENAVLNMSEGEEKTIILPPNEAYGEINKSYIVPYPIEIFNNTNITPKKGMRLYIRGAPVK IAEVNETTVLLDFNHPMAGKTLVFDIKLINITIPQK >Mature_196_residues MKNLTVFGLISIILLLGFSGCVDNTNKGAPIENPPQSKICEFPYGNGTIVSVDYIGKFENGTIFDTSIEQVAKEANIYNP QRNYKPIEFTIGKGQMIKGFENAVLNMSEGEEKTIILPPNEAYGEINKSYIVPYPIEIFNNTNITPKKGMRLYIRGAPVK IAEVNETTVLLDFNHPMAGKTLVFDIKLINITIPQK
Specific function: PPIases accelerate the folding of proteins [H]
COG id: COG1047
COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerases 2
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PPIase FKBP-type domain [H]
Homologues:
Organism=Homo sapiens, GI4503727, Length=84, Percent_Identity=38.0952380952381, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001179 [H]
Pfam domain/function: PF00254 FKBP_C [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 21791; Mature: 21791
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50059 FKBP_PPIASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLTVFGLISIILLLGFSGCVDNTNKGAPIENPPQSKICEFPYGNGTIVSVDYIGKFEN CCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEEEEECCC GTIFDTSIEQVAKEANIYNPQRNYKPIEFTIGKGQMIKGFENAVLNMSEGEEKTIILPPN CEEEECHHHHHHHHCCCCCCCCCCCCEEEEECCCCEECCCCHHEEECCCCCCEEEEECCC EAYGEINKSYIVPYPIEIFNNTNITPKKGMRLYIRGAPVKIAEVNETTVLLDFNHPMAGK HHHCCCCCCEECCCEEEEECCCCCCCCCCCEEEEECCCEEEEECCCEEEEEECCCCCCCC TLVFDIKLINITIPQK EEEEEEEEEEEEECCC >Mature Secondary Structure MKNLTVFGLISIILLLGFSGCVDNTNKGAPIENPPQSKICEFPYGNGTIVSVDYIGKFEN CCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEEEEECCC GTIFDTSIEQVAKEANIYNPQRNYKPIEFTIGKGQMIKGFENAVLNMSEGEEKTIILPPN CEEEECHHHHHHHHCCCCCCCCCCCCEEEEECCCCEECCCCHHEEECCCCCCEEEEECCC EAYGEINKSYIVPYPIEIFNNTNITPKKGMRLYIRGAPVKIAEVNETTVLLDFNHPMAGK HHHCCCCCCEECCCEEEEECCCCCCCCCCCEEEEECCCEEEEECCCEEEEEECCCCCCCC TLVFDIKLINITIPQK EEEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9440528 [H]