Click here to switch to the map view.

The map label for this gene is slyD [C]

Identifier: 150401751

GI number: 150401751

Start: 1391680

End: 1392195

Strand: Reverse

Name: slyD [C]

Synonym: Maeo_1329

Alternate gene names: 150401751

Gene position: 1392195-1391680 (Counterclockwise)

Preceding gene: 150401754

Following gene: 150401750

Centisome position: 88.7

GC content: 37.02

Gene sequence:

>516_bases
TTGGTAGAAAAAGGATATAAAGTTAAAGTAGATTACACTGGTAAATTAGAAAATGGAGAAATTTTTGATACATCAATTGA
AAGTGTTGCAAAAGAAGCAGGATTATATACTCCTGAAAGACCATACGAACCATTGGAGTTCAAACTTGGCAAAGGACAGC
TCATAAAAGGATTTGAAGATGCAGTTCTTGGAATGGAAGTAGGAGAAGAAAAAACAGTTACAATACCTGCTAATGAAGCA
TACGGAGAAAGAGATGAACAATTAATTCAAAAAGTTCCAAAAGATGCATTTGAAGGTGCAGATTTTGAGCCAGAAGTTGG
TATGGTAATACTTGCAGGAGGAGCGCCTGCTACAATAACAGAAATTGATGATGAAAATGTTATGTTGGATTTCAACCACC
AATTGGCAGGAAAAACATTGGTATTCACAATTAAAGTATTGGATGCAATGGAAGGATGCGATGACGAAGAAGATTGCGAG
TGCGAAGGCGATGGTTGCGGTTGCGACTGTCATTAA

Upstream 100 bases:

>100_bases
TTATATATAAAAATTGTATAATAATTATAAGATAATTGTATAATAATATATAATAATACATAAATAGATATACAAAAAAT
AAAAAAAAGATGTGATTTTT

Downstream 100 bases:

>100_bases
TTAATTTTATAATTATTTTTATTTTTTTATTTTATTAATTATTTTATTGTCATATTGTATTTTTTTATTTTAATGTGTGA
TATTTTATGAAAAATTTAAC

Product: peptidylprolyl isomerase FKBP-type

Products: NA

Alternate protein names: PPIase; MtFK; Rotamase [H]

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MVEKGYKVKVDYTGKLENGEIFDTSIESVAKEAGLYTPERPYEPLEFKLGKGQLIKGFEDAVLGMEVGEEKTVTIPANEA
YGERDEQLIQKVPKDAFEGADFEPEVGMVILAGGAPATITEIDDENVMLDFNHQLAGKTLVFTIKVLDAMEGCDDEEDCE
CEGDGCGCDCH

Sequences:

>Translated_171_residues
MVEKGYKVKVDYTGKLENGEIFDTSIESVAKEAGLYTPERPYEPLEFKLGKGQLIKGFEDAVLGMEVGEEKTVTIPANEA
YGERDEQLIQKVPKDAFEGADFEPEVGMVILAGGAPATITEIDDENVMLDFNHQLAGKTLVFTIKVLDAMEGCDDEEDCE
CEGDGCGCDCH
>Mature_171_residues
MVEKGYKVKVDYTGKLENGEIFDTSIESVAKEAGLYTPERPYEPLEFKLGKGQLIKGFEDAVLGMEVGEEKTVTIPANEA
YGERDEQLIQKVPKDAFEGADFEPEVGMVILAGGAPATITEIDDENVMLDFNHQLAGKTLVFTIKVLDAMEGCDDEEDCE
CEGDGCGCDCH

Specific function: PPIases accelerate the folding of proteins [H]

COG id: COG1047

COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerases 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PPIase FKBP-type domain [H]

Homologues:

Organism=Escherichia coli, GI1789748, Length=134, Percent_Identity=43.2835820895522, Blast_Score=100, Evalue=5e-23,
Organism=Escherichia coli, GI1786211, Length=152, Percent_Identity=32.8947368421053, Blast_Score=75, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6323566, Length=82, Percent_Identity=37.8048780487805, Blast_Score=62, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6323482, Length=82, Percent_Identity=39.0243902439024, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001179 [H]

Pfam domain/function: PF00254 FKBP_C [H]

EC number: =5.2.1.8 [H]

Molecular weight: Translated: 18681; Mature: 18681

Theoretical pI: Translated: 3.91; Mature: 3.91

Prosite motif: PS00022 EGF_1 ; PS50059 FKBP_PPIASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEKGYKVKVDYTGKLENGEIFDTSIESVAKEAGLYTPERPYEPLEFKLGKGQLIKGFED
CCCCCCEEEEEECCCCCCCCEECHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEECCHHH
AVLGMEVGEEKTVTIPANEAYGERDEQLIQKVPKDAFEGADFEPEVGMVILAGGAPATIT
HEECEECCCCEEEEEECCCCCCCHHHHHHHHCCHHHHCCCCCCCCCCEEEEECCCCCEEE
EIDDENVMLDFNHQLAGKTLVFTIKVLDAMEGCDDEEDCECEGDGCGCDCH
EECCCCEEEEECCCCCCCEEEEEEEEHHHHHCCCCCCCCEECCCCCCCCCC
>Mature Secondary Structure
MVEKGYKVKVDYTGKLENGEIFDTSIESVAKEAGLYTPERPYEPLEFKLGKGQLIKGFED
CCCCCCEEEEEECCCCCCCCEECHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEECCHHH
AVLGMEVGEEKTVTIPANEAYGERDEQLIQKVPKDAFEGADFEPEVGMVILAGGAPATIT
HEECEECCCCEEEEEECCCCCCCHHHHHHHHCCHHHHCCCCCCCCCCEEEEECCCCCEEE
EIDDENVMLDFNHQLAGKTLVFTIKVLDAMEGCDDEEDCECEGDGCGCDCH
EECCCCEEEEECCCCCCCEEEEEEEEHHHHHCCCCCCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9440528 [H]