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The map label for this gene is rnp3 [H]

Identifier: 150401732

GI number: 150401732

Start: 1369907

End: 1370629

Strand: Reverse

Name: rnp3 [H]

Synonym: Maeo_1310

Alternate gene names: 150401732

Gene position: 1370629-1369907 (Counterclockwise)

Preceding gene: 150401733

Following gene: 150401731

Centisome position: 87.33

GC content: 29.74

Gene sequence:

>723_bases
ATGGAGCTCCTTGATATTAATTATATTTTTGATAATGATGGAATTGATTTATTAAAAGAAATTGGATGGAATGGTTCAAT
AGCCGTTCAAAATAATGAATACAACAAAGAAAAATTTGAAGAAATTAAAAAATACGGAGAAACACAGGATTTTAAGGTAT
ATTCCGGACTAAAAATAATATCAAAATCAAAATCTCCGCGGGACATTACAAAATTAGTTAAAAAATACAGGGATAAAGTA
GATGTTATTCTTGTAGGTGGTGGAGATATTACAATCAATAGAACGGCACTTGAAACTCATGCCGTAGATATATTGTCTTC
ACCAGAACGATATAGAATGGATAATGGCATAGACCATATTCTTGCAAGATTGGGGAGCTCCCATAGGGTGGCAATAGAAT
TAAACTTCAAAAATCTATTGGAAAAACAGCATTATGATAGGGCAAAAATTATATGGTCATTTAGGAGAAACCTATTTTTA
GCAAAAAAATATGATACTCCCGTTGTTATATCCAGCAGTGCAAAAAATATATATGGGATAAAAGCCCCAAAAGATTTGAG
AAGTTTTTTAAATACTCTGACAGAAGATATTAATTATTCAAATAAAATAATGGATACCCCATATAAAATTGCCAATTATA
GAACTTATTTAAAAGATAAATCTGTAATTAGGTATGGCATTGAGGTATTTACCAATAAAAATAATGAATGCATTGAGGAG
TAA

Upstream 100 bases:

>100_bases
TTTTTATATCGATAATTTAAAATTATATTATAATAGAATTATATTATAAATTATATCTTTTTTTAATATGCATTATTAAT
AAATAAAATGGTTGAATACT

Downstream 100 bases:

>100_bases
TATGACATTATACGAAAATAAACAGTGCGAAATATGTGGAGCTCCCGCCAAAAATTTTATGTTTGGTAGTTTTATATGCA
ATAATGAGGATTGCATAGAA

Product: ribonuclease P

Products: NA

Alternate protein names: RNase P component 3 [H]

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MELLDINYIFDNDGIDLLKEIGWNGSIAVQNNEYNKEKFEEIKKYGETQDFKVYSGLKIISKSKSPRDITKLVKKYRDKV
DVILVGGGDITINRTALETHAVDILSSPERYRMDNGIDHILARLGSSHRVAIELNFKNLLEKQHYDRAKIIWSFRRNLFL
AKKYDTPVVISSSAKNIYGIKAPKDLRSFLNTLTEDINYSNKIMDTPYKIANYRTYLKDKSVIRYGIEVFTNKNNECIEE

Sequences:

>Translated_240_residues
MELLDINYIFDNDGIDLLKEIGWNGSIAVQNNEYNKEKFEEIKKYGETQDFKVYSGLKIISKSKSPRDITKLVKKYRDKV
DVILVGGGDITINRTALETHAVDILSSPERYRMDNGIDHILARLGSSHRVAIELNFKNLLEKQHYDRAKIIWSFRRNLFL
AKKYDTPVVISSSAKNIYGIKAPKDLRSFLNTLTEDINYSNKIMDTPYKIANYRTYLKDKSVIRYGIEVFTNKNNECIEE
>Mature_240_residues
MELLDINYIFDNDGIDLLKEIGWNGSIAVQNNEYNKEKFEEIKKYGETQDFKVYSGLKIISKSKSPRDITKLVKKYRDKV
DVILVGGGDITINRTALETHAVDILSSPERYRMDNGIDHILARLGSSHRVAIELNFKNLLEKQHYDRAKIIWSFRRNLFL
AKKYDTPVVISSSAKNIYGIKAPKDLRSFLNTLTEDINYSNKIMDTPYKIANYRTYLKDKSVIRYGIEVFTNKNNECIEE

Specific function: Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends [H]

COG id: COG1603

COG function: function code J; RNase P/RNase MRP subunit p30

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the eukaryotic/archaeal RNase P protein component 3 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016195
- InterPro:   IPR002738 [H]

Pfam domain/function: PF01876 RNase_P_p30 [H]

EC number: =3.1.26.5 [H]

Molecular weight: Translated: 27845; Mature: 27845

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLDINYIFDNDGIDLLKEIGWNGSIAVQNNEYNKEKFEEIKKYGETQDFKVYSGLKII
CCEEEEEEEECCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEHCCCEEEE
SKSKSPRDITKLVKKYRDKVDVILVGGGDITINRTALETHAVDILSSPERYRMDNGIDHI
ECCCCCHHHHHHHHHHCCCCCEEEECCCEEEEEEEHHHHHHHHHHCCCHHHHHCCCHHHH
LARLGSSHRVAIELNFKNLLEKQHYDRAKIIWSFRRNLFLAKKYDTPVVISSSAKNIYGI
HHHCCCCCEEEEEECHHHHHHHHCCCHHHHHHHHHHCEEEEEECCCCEEEECCCCCEEEC
KAPKDLRSFLNTLTEDINYSNKIMDTPYKIANYRTYLKDKSVIRYGIEVFTNKNNECIEE
CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHEEEHEEECCCCHHHCC
>Mature Secondary Structure
MELLDINYIFDNDGIDLLKEIGWNGSIAVQNNEYNKEKFEEIKKYGETQDFKVYSGLKII
CCEEEEEEEECCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEHCCCEEEE
SKSKSPRDITKLVKKYRDKVDVILVGGGDITINRTALETHAVDILSSPERYRMDNGIDHI
ECCCCCHHHHHHHHHHCCCCCEEEECCCEEEEEEEHHHHHHHHHHCCCHHHHHCCCHHHH
LARLGSSHRVAIELNFKNLLEKQHYDRAKIIWSFRRNLFLAKKYDTPVVISSSAKNIYGI
HHHCCCCCEEEEEECHHHHHHHHCCCHHHHHHHHHHCEEEEEECCCCEEEECCCCCEEEC
KAPKDLRSFLNTLTEDINYSNKIMDTPYKIANYRTYLKDKSVIRYGIEVFTNKNNECIEE
CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHEEEHEEECCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA