| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is yjjX [C]
Identifier: 150401731
GI number: 150401731
Start: 1369255
End: 1369905
Strand: Reverse
Name: yjjX [C]
Synonym: Maeo_1309
Alternate gene names: 150401731
Gene position: 1369905-1369255 (Counterclockwise)
Preceding gene: 150401732
Following gene: 150401730
Centisome position: 87.28
GC content: 35.48
Gene sequence:
>651_bases ATGACATTATACGAAAATAAACAGTGCGAAATATGTGGAGCTCCCGCCAAAAATTTTATGTTTGGTAGTTTTATATGCAA TAATGAGGATTGCATAGAAAAGGCAAAACTACTACGGGGAGGTCCAGCAGGGCACAAGCTAAAGGTAGTAACCGTTGGAA GTGAAAACCCAGTAAAGATAAAAGCCGTAGAAGAGGTGATTACCAATACCATTGGAAGCGTATTGGTTAAAGGAATAAAT ACAGATAGTGGGGTATCGCCCCAACCAGTTGGATTGGAAGAAACATCAAAAGGAGCCATTAACAGGGCAAAAGAAGCCTT TAATTCAAAATCTTGTTTATATGGTATTGGAATAGAAGCTGGACTTATAGAAATGGGGGGAAAATATTTAGACATGCATA TATGTGCCATATATAACGGATTAGATTACACTATTGGGAGCTCCAAGGGATTTGAATTGCCAGAAGAAATAGTAACTGAA ATAAAAAAAGGAGTTGAATGTAGCATTGCAGTTCAAAATATATACAATATTCAAGACATAGGCAAAAATGAAGGTATTAT AGGATACATCACCAATGGTGCATTAAATAGAATAGATTTATGTAAAGATGCAATATTAAGTGCTATGATTCCACGACTAA AACTAAGGTAA
Upstream 100 bases:
>100_bases AAAATTGCCAATTATAGAACTTATTTAAAAGATAAATCTGTAATTAGGTATGGCATTGAGGTATTTACCAATAAAAATAA TGAATGCATTGAGGAGTAAT
Downstream 100 bases:
>100_bases TATATAAAAGTTATGAAAACAATAACAAATGAATAAATACAGTGAATCGGCAGTTGATTGAATATGCATGCCCATAACAA GTAATTGAGCAAAATTAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MTLYENKQCEICGAPAKNFMFGSFICNNEDCIEKAKLLRGGPAGHKLKVVTVGSENPVKIKAVEEVITNTIGSVLVKGIN TDSGVSPQPVGLEETSKGAINRAKEAFNSKSCLYGIGIEAGLIEMGGKYLDMHICAIYNGLDYTIGSSKGFELPEEIVTE IKKGVECSIAVQNIYNIQDIGKNEGIIGYITNGALNRIDLCKDAILSAMIPRLKLR
Sequences:
>Translated_216_residues MTLYENKQCEICGAPAKNFMFGSFICNNEDCIEKAKLLRGGPAGHKLKVVTVGSENPVKIKAVEEVITNTIGSVLVKGIN TDSGVSPQPVGLEETSKGAINRAKEAFNSKSCLYGIGIEAGLIEMGGKYLDMHICAIYNGLDYTIGSSKGFELPEEIVTE IKKGVECSIAVQNIYNIQDIGKNEGIIGYITNGALNRIDLCKDAILSAMIPRLKLR >Mature_215_residues TLYENKQCEICGAPAKNFMFGSFICNNEDCIEKAKLLRGGPAGHKLKVVTVGSENPVKIKAVEEVITNTIGSVLVKGINT DSGVSPQPVGLEETSKGAINRAKEAFNSKSCLYGIGIEAGLIEMGGKYLDMHICAIYNGLDYTIGSSKGFELPEEIVTEI KKGVECSIAVQNIYNIQDIGKNEGIIGYITNGALNRIDLCKDAILSAMIPRLKLR
Specific function: Unknown
COG id: COG1986
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0244 family [H]
Homologues:
Organism=Escherichia coli, GI87082442, Length=171, Percent_Identity=28.6549707602339, Blast_Score=64, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002786 [H]
Pfam domain/function: PF01931 DUF84 [H]
EC number: NA
Molecular weight: Translated: 23262; Mature: 23131
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLYENKQCEICGAPAKNFMFGSFICNNEDCIEKAKLLRGGPAGHKLKVVTVGSENPVKI CCCCCCCCCEEECCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEE KAVEEVITNTIGSVLVKGINTDSGVSPQPVGLEETSKGAINRAKEAFNSKSCLYGIGIEA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCC GLIEMGGKYLDMHICAIYNGLDYTIGSSKGFELPEEIVTEIKKGVECSIAVQNIYNIQDI CHHHHCCEEEEEEEEEEECCCCEEECCCCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHC GKNEGIIGYITNGALNRIDLCKDAILSAMIPRLKLR CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TLYENKQCEICGAPAKNFMFGSFICNNEDCIEKAKLLRGGPAGHKLKVVTVGSENPVKI CCCCCCCCEEECCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEE KAVEEVITNTIGSVLVKGINTDSGVSPQPVGLEETSKGAINRAKEAFNSKSCLYGIGIEA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCC GLIEMGGKYLDMHICAIYNGLDYTIGSSKGFELPEEIVTEIKKGVECSIAVQNIYNIQDI CHHHHCCEEEEEEEEEEECCCCEEECCCCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHC GKNEGIIGYITNGALNRIDLCKDAILSAMIPRLKLR CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]