Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is yjjX [C]

Identifier: 150401731

GI number: 150401731

Start: 1369255

End: 1369905

Strand: Reverse

Name: yjjX [C]

Synonym: Maeo_1309

Alternate gene names: 150401731

Gene position: 1369905-1369255 (Counterclockwise)

Preceding gene: 150401732

Following gene: 150401730

Centisome position: 87.28

GC content: 35.48

Gene sequence:

>651_bases
ATGACATTATACGAAAATAAACAGTGCGAAATATGTGGAGCTCCCGCCAAAAATTTTATGTTTGGTAGTTTTATATGCAA
TAATGAGGATTGCATAGAAAAGGCAAAACTACTACGGGGAGGTCCAGCAGGGCACAAGCTAAAGGTAGTAACCGTTGGAA
GTGAAAACCCAGTAAAGATAAAAGCCGTAGAAGAGGTGATTACCAATACCATTGGAAGCGTATTGGTTAAAGGAATAAAT
ACAGATAGTGGGGTATCGCCCCAACCAGTTGGATTGGAAGAAACATCAAAAGGAGCCATTAACAGGGCAAAAGAAGCCTT
TAATTCAAAATCTTGTTTATATGGTATTGGAATAGAAGCTGGACTTATAGAAATGGGGGGAAAATATTTAGACATGCATA
TATGTGCCATATATAACGGATTAGATTACACTATTGGGAGCTCCAAGGGATTTGAATTGCCAGAAGAAATAGTAACTGAA
ATAAAAAAAGGAGTTGAATGTAGCATTGCAGTTCAAAATATATACAATATTCAAGACATAGGCAAAAATGAAGGTATTAT
AGGATACATCACCAATGGTGCATTAAATAGAATAGATTTATGTAAAGATGCAATATTAAGTGCTATGATTCCACGACTAA
AACTAAGGTAA

Upstream 100 bases:

>100_bases
AAAATTGCCAATTATAGAACTTATTTAAAAGATAAATCTGTAATTAGGTATGGCATTGAGGTATTTACCAATAAAAATAA
TGAATGCATTGAGGAGTAAT

Downstream 100 bases:

>100_bases
TATATAAAAGTTATGAAAACAATAACAAATGAATAAATACAGTGAATCGGCAGTTGATTGAATATGCATGCCCATAACAA
GTAATTGAGCAAAATTAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MTLYENKQCEICGAPAKNFMFGSFICNNEDCIEKAKLLRGGPAGHKLKVVTVGSENPVKIKAVEEVITNTIGSVLVKGIN
TDSGVSPQPVGLEETSKGAINRAKEAFNSKSCLYGIGIEAGLIEMGGKYLDMHICAIYNGLDYTIGSSKGFELPEEIVTE
IKKGVECSIAVQNIYNIQDIGKNEGIIGYITNGALNRIDLCKDAILSAMIPRLKLR

Sequences:

>Translated_216_residues
MTLYENKQCEICGAPAKNFMFGSFICNNEDCIEKAKLLRGGPAGHKLKVVTVGSENPVKIKAVEEVITNTIGSVLVKGIN
TDSGVSPQPVGLEETSKGAINRAKEAFNSKSCLYGIGIEAGLIEMGGKYLDMHICAIYNGLDYTIGSSKGFELPEEIVTE
IKKGVECSIAVQNIYNIQDIGKNEGIIGYITNGALNRIDLCKDAILSAMIPRLKLR
>Mature_215_residues
TLYENKQCEICGAPAKNFMFGSFICNNEDCIEKAKLLRGGPAGHKLKVVTVGSENPVKIKAVEEVITNTIGSVLVKGINT
DSGVSPQPVGLEETSKGAINRAKEAFNSKSCLYGIGIEAGLIEMGGKYLDMHICAIYNGLDYTIGSSKGFELPEEIVTEI
KKGVECSIAVQNIYNIQDIGKNEGIIGYITNGALNRIDLCKDAILSAMIPRLKLR

Specific function: Unknown

COG id: COG1986

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0244 family [H]

Homologues:

Organism=Escherichia coli, GI87082442, Length=171, Percent_Identity=28.6549707602339, Blast_Score=64, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002786 [H]

Pfam domain/function: PF01931 DUF84 [H]

EC number: NA

Molecular weight: Translated: 23262; Mature: 23131

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLYENKQCEICGAPAKNFMFGSFICNNEDCIEKAKLLRGGPAGHKLKVVTVGSENPVKI
CCCCCCCCCEEECCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEE
KAVEEVITNTIGSVLVKGINTDSGVSPQPVGLEETSKGAINRAKEAFNSKSCLYGIGIEA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCC
GLIEMGGKYLDMHICAIYNGLDYTIGSSKGFELPEEIVTEIKKGVECSIAVQNIYNIQDI
CHHHHCCEEEEEEEEEEECCCCEEECCCCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHC
GKNEGIIGYITNGALNRIDLCKDAILSAMIPRLKLR
CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLYENKQCEICGAPAKNFMFGSFICNNEDCIEKAKLLRGGPAGHKLKVVTVGSENPVKI
CCCCCCCCEEECCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEE
KAVEEVITNTIGSVLVKGINTDSGVSPQPVGLEETSKGAINRAKEAFNSKSCLYGIGIEA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCC
GLIEMGGKYLDMHICAIYNGLDYTIGSSKGFELPEEIVTEIKKGVECSIAVQNIYNIQDI
CHHHHCCEEEEEEEEEEECCCCEEECCCCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHC
GKNEGIIGYITNGALNRIDLCKDAILSAMIPRLKLR
CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]