| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is trpD [H]
Identifier: 150401539
GI number: 150401539
Start: 1161196
End: 1162176
Strand: Direct
Name: trpD [H]
Synonym: Maeo_1116
Alternate gene names: 150401539
Gene position: 1161196-1162176 (Clockwise)
Preceding gene: 150401538
Following gene: 150401540
Centisome position: 73.99
GC content: 32.11
Gene sequence:
>981_bases ATGATGCTAAATAAGATAATAAACAGAGAAGATTTATCCTATGAAGAATCATACGATTTGTTTAATGATTTATTGAATGA AAGCGAAATAAAAATTGGTGCCTATTTGTCCGCACTTCAAACAAAAGGATTTACTGCCAACGAAATAGCAGGTTTTGCAA AAGCTATGAGAGATAATGCAATTGCAATTGATTTGGGGAAAGGTATATCCGACACTTGCGGAACTGGGGGAGATGGTTAT TCTACCATAAATATATCCACTGCTGTATCCATTATATTATCTTGCTTTACAAAGGTCGCAAAACATGGTAATGTCTCCAT CACTTCAAAAAGTGGCTCTGCCAATGTGCTTGATGCCCTAAATATAAAAAAGGACTGCAACCCCGAAGAAGCCAAAAAAA TGATAGATAAAACAAATTTTGTGTTTTTATTTGCCCCAAATTACCATCCTGCACTTAAAAAAATCATGCCAGTTAGAAAA GAATTGGGAATAAAAACGATATTTAATATATTAGGGCCACTTGCAAACCCTGCAAATCCAGATTATCAAATTATGGGCGT AAATTCACTTGATTTAGTTGAAAAAGTTGGAGATGCTTTAAAATTACTTGGAGTTAAAAAAGCTCTTGTGGTTTATGGAA ATGGATTAGATGAGTTAAACCCAAATGATTACTCTACAATTTGCGAAATAAATGAAAATGAGGAAAATAAAATCTATAAA ATACATCCAAAAGATATTGGATTAACTCCTTCAAACCCCATTCCGTGCAATAGTCCAGATGAAAGTGCAAAAAGAATAAT TAAAATATTTTCAGGAACAATAAATGAGGATAGAGATTTTATATTATTAAATGCTGCCGCTGCACTTTATGCTTCAAATA TAGCAAAGGACTATAAAGAAGGGCTAAAACTTGCAAAAGAAGTAATTGATAATGGAACTGTATTAAAAAAATTAAAAGAA ATACAAAAATACGGGGAATAG
Upstream 100 bases:
>100_bases TGAAAAAGACCGAAGATTGACTATATAAATTGTATTATTGGTTAAAGATGGGAGCTCCATTTATATTCCATATTCCCCAT TCAAATTTAAGAGGTAAAAA
Downstream 100 bases:
>100_bases TTATGACAGATAAAACGACTACAAACAACATAACAGATGAAAACTCAAAAAAACAGATAATTAGAAAAAATTTTGATTTT GTAGAACCTTTAAAATTATA
Product: anthranilate phosphoribosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MMLNKIINREDLSYEESYDLFNDLLNESEIKIGAYLSALQTKGFTANEIAGFAKAMRDNAIAIDLGKGISDTCGTGGDGY STINISTAVSIILSCFTKVAKHGNVSITSKSGSANVLDALNIKKDCNPEEAKKMIDKTNFVFLFAPNYHPALKKIMPVRK ELGIKTIFNILGPLANPANPDYQIMGVNSLDLVEKVGDALKLLGVKKALVVYGNGLDELNPNDYSTICEINENEENKIYK IHPKDIGLTPSNPIPCNSPDESAKRIIKIFSGTINEDRDFILLNAAAALYASNIAKDYKEGLKLAKEVIDNGTVLKKLKE IQKYGE
Sequences:
>Translated_326_residues MMLNKIINREDLSYEESYDLFNDLLNESEIKIGAYLSALQTKGFTANEIAGFAKAMRDNAIAIDLGKGISDTCGTGGDGY STINISTAVSIILSCFTKVAKHGNVSITSKSGSANVLDALNIKKDCNPEEAKKMIDKTNFVFLFAPNYHPALKKIMPVRK ELGIKTIFNILGPLANPANPDYQIMGVNSLDLVEKVGDALKLLGVKKALVVYGNGLDELNPNDYSTICEINENEENKIYK IHPKDIGLTPSNPIPCNSPDESAKRIIKIFSGTINEDRDFILLNAAAALYASNIAKDYKEGLKLAKEVIDNGTVLKKLKE IQKYGE >Mature_326_residues MMLNKIINREDLSYEESYDLFNDLLNESEIKIGAYLSALQTKGFTANEIAGFAKAMRDNAIAIDLGKGISDTCGTGGDGY STINISTAVSIILSCFTKVAKHGNVSITSKSGSANVLDALNIKKDCNPEEAKKMIDKTNFVFLFAPNYHPALKKIMPVRK ELGIKTIFNILGPLANPANPDYQIMGVNSLDLVEKVGDALKLLGVKKALVVYGNGLDELNPNDYSTICEINENEENKIYK IHPKDIGLTPSNPIPCNSPDESAKRIIKIFSGTINEDRDFILLNAAAALYASNIAKDYKEGLKLAKEVIDNGTVLKKLKE IQKYGE
Specific function: Tryptophan biosynthesis; first step. Tryptophan biosynthesis; second step. [C]
COG id: COG0547
COG function: function code E; Anthranilate phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate phosphoribosyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1787517, Length=331, Percent_Identity=33.5347432024169, Blast_Score=178, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6320561, Length=353, Percent_Identity=30.028328611898, Blast_Score=134, Evalue=2e-32,
Paralogues:
None
Copy number: 945 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 900 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005940 - InterPro: IPR000312 - InterPro: IPR017459 - InterPro: IPR020072 [H]
Pfam domain/function: PF02885 Glycos_trans_3N; PF00591 Glycos_transf_3 [H]
EC number: =2.4.2.18 [H]
Molecular weight: Translated: 35630; Mature: 35630
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLNKIINREDLSYEESYDLFNDLLNESEIKIGAYLSALQTKGFTANEIAGFAKAMRDNA CCHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC IAIDLGKGISDTCGTGGDGYSTINISTAVSIILSCFTKVAKHGNVSITSKSGSANVLDAL EEEECCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHH NIKKDCNPEEAKKMIDKTNFVFLFAPNYHPALKKIMPVRKELGIKTIFNILGPLANPANP CCCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DYQIMGVNSLDLVEKVGDALKLLGVKKALVVYGNGLDELNPNDYSTICEINENEENKIYK CEEEEECCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCEEEEECCCCCCCEEE IHPKDIGLTPSNPIPCNSPDESAKRIIKIFSGTINEDRDFILLNAAAALYASNIAKDYKE ECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHH GLKLAKEVIDNGTVLKKLKEIQKYGE HHHHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure MMLNKIINREDLSYEESYDLFNDLLNESEIKIGAYLSALQTKGFTANEIAGFAKAMRDNA CCHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC IAIDLGKGISDTCGTGGDGYSTINISTAVSIILSCFTKVAKHGNVSITSKSGSANVLDAL EEEECCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHH NIKKDCNPEEAKKMIDKTNFVFLFAPNYHPALKKIMPVRKELGIKTIFNILGPLANPANP CCCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DYQIMGVNSLDLVEKVGDALKLLGVKKALVVYGNGLDELNPNDYSTICEINENEENKIYK CEEEEECCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCEEEEECCCCCCCEEE IHPKDIGLTPSNPIPCNSPDESAKRIIKIFSGTINEDRDFILLNAAAALYASNIAKDYKE ECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHH GLKLAKEVIDNGTVLKKLKEIQKYGE HHHHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA