| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
Click here to switch to the map view.
The map label for this gene is 150401512
Identifier: 150401512
GI number: 150401512
Start: 1139242
End: 1139724
Strand: Direct
Name: 150401512
Synonym: Maeo_1089
Alternate gene names: NA
Gene position: 1139242-1139724 (Clockwise)
Preceding gene: 150401511
Following gene: 150401513
Centisome position: 72.59
GC content: 31.06
Gene sequence:
>483_bases ATGGATTTCACGATTCTCCAATCATTTCTTATGAATCTCGTAGAAAAATATGGGTTATTGGGTATATTTATAATCGGGTT TTCAGAACCAATATTTCAACCATTTCCAACAGAAATATTTATGATAGCAGGAATTGCCTTGGGTCTTGATTGGAAACTTG TTATGATTATGGGGGCAGTAGGTACCACTGTTGGTTCGGTAATTACTTATTATCTAGCTTCAGAATATGGCGAAAAATTA GCATATAAATTATTTGATGAAAAGAAATATGCCAAAGGCGAAAAATTTTTTAAAAAATATGGGGTATGGGGATTTTTAAT TATAAGTTTTACTCCCCTTCCATTTGAAATTATGTGTTGGGTATGTGGGTCTTTTGAGATGCCTTTTAAAAACTATTTAT TCGCGGTATTTATTAGTAGGGTAATAAAACATGGTGTTTTTATAATGCCTTTTGTGCTTGGATATGATTTAAACATAATT TAA
Upstream 100 bases:
>100_bases TGCCCAGTATTTAAATGGTGTCAATATTTATGATGGTTTTATAGAGGTTCATCCTTCAACAGACCCATTTTATAAAATAT TTGGTAGTAGGTAATATATT
Downstream 100 bases:
>100_bases AATAATGCATAAAATATTGATAAAATATTAAATAATATAATTACATATTATTTTTAGTGTGGTGTTTTAAGGAGCTCCAT GCAATCATATATCCAATATT
Product: SNARE associated Golgi protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MDFTILQSFLMNLVEKYGLLGIFIIGFSEPIFQPFPTEIFMIAGIALGLDWKLVMIMGAVGTTVGSVITYYLASEYGEKL AYKLFDEKKYAKGEKFFKKYGVWGFLIISFTPLPFEIMCWVCGSFEMPFKNYLFAVFISRVIKHGVFIMPFVLGYDLNII
Sequences:
>Translated_160_residues MDFTILQSFLMNLVEKYGLLGIFIIGFSEPIFQPFPTEIFMIAGIALGLDWKLVMIMGAVGTTVGSVITYYLASEYGEKL AYKLFDEKKYAKGEKFFKKYGVWGFLIISFTPLPFEIMCWVCGSFEMPFKNYLFAVFISRVIKHGVFIMPFVLGYDLNII >Mature_160_residues MDFTILQSFLMNLVEKYGLLGIFIIGFSEPIFQPFPTEIFMIAGIALGLDWKLVMIMGAVGTTVGSVITYYLASEYGEKL AYKLFDEKKYAKGEKFFKKYGVWGFLIISFTPLPFEIMCWVCGSFEMPFKNYLFAVFISRVIKHGVFIMPFVLGYDLNII
Specific function: Unknown
COG id: COG1238
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015414 [H]
Pfam domain/function: PF09335 SNARE_assoc [H]
EC number: NA
Molecular weight: Translated: 18337; Mature: 18337
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFTILQSFLMNLVEKYGLLGIFIIGFSEPIFQPFPTEIFMIAGIALGLDWKLVMIMGAV CCHHHHHHHHHHHHHHCCHHEEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH GTTVGSVITYYLASEYGEKLAYKLFDEKKYAKGEKFFKKYGVWGFLIISFTPLPFEIMCW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEECCCCCHHHHHH VCGSFEMPFKNYLFAVFISRVIKHGVFIMPFVLGYDLNII HHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC >Mature Secondary Structure MDFTILQSFLMNLVEKYGLLGIFIIGFSEPIFQPFPTEIFMIAGIALGLDWKLVMIMGAV CCHHHHHHHHHHHHHHCCHHEEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH GTTVGSVITYYLASEYGEKLAYKLFDEKKYAKGEKFFKKYGVWGFLIISFTPLPFEIMCW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEECCCCCHHHHHH VCGSFEMPFKNYLFAVFISRVIKHGVFIMPFVLGYDLNII HHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]