| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
Click here to switch to the map view.
The map label for this gene is bioB [C]
Identifier: 150401450
GI number: 150401450
Start: 1054554
End: 1055588
Strand: Direct
Name: bioB [C]
Synonym: Maeo_1026
Alternate gene names: 150401450
Gene position: 1054554-1055588 (Clockwise)
Preceding gene: 150401449
Following gene: 150401451
Centisome position: 67.19
GC content: 31.5
Gene sequence:
>1035_bases ATGGATTTTTCACACATACGGGACAATTTTGAAAATTTAAAAGAAGATACTTCCAAAGAAAACCTAAAAAACGGACTAAT ATCAAAAGAAGATGCCTTAAAGTTATTTAATATTTCCAAAGGTAATGATTATTTAAATTTATTCAGTATTGCATCAGAAG TAAGGGACTATTTTAAAAAAGAAATAGAAATAATATCTTCAATCCATATCACCAATATATGTTCCGTAAATCCGAAATGT TATTATTGTGGTTTCGCGGCGGGAACTTCAAAGGAAGGATATTATGAGCCATTTAGAACGACAGACGAAGAAATAAAAAA TTCCGCAATAGCAATTGAAAAAAGTGGAATTATGAGAGTTAGCTGTTCCTCAGCACATGGATATGGGGGCAAAGAAACAT TACGAACTTTGAAAATAGTTAAAGAAAATACAAATTTAGAAGTTTTAGTAAATGCTGGGGCAGATTTTACAGAAAACTGC ATAAAAGAATTAAAAAAACATGACATCGATATAATTTGCTGTAATTTAGAAACCATTAATAATAAAGTATTTAAATCAGT TAAACCAGGGGAAGATTTAGAAAATAGAATAAATATCTGTAAATTGGTAAAAAAATATGATATAAATTTATCATCTGGTT TATTGTTAGGAATAGGGGAAAGTTATGAGGATAGGGCAAATCATTTATTGTTTTTAAAGGAGCTCCCTGTGGATGAAATT CCTATAATGGGATTTAATCCATATAAAGATACACCGATGGAAAACCATCCAAAATGTTCGGCGTTGGAACAGGCTAAAAC TATTGCCATAAGTAGGTTGATGTTTCCAGATATTAGAATTACATCACCAACCCCAACAATTGGAGCGGAGCTTGTTCAAT TTGCACTAATGGGAGGGGCAAGCAACATAGCAACCGTAATACCAGACAACCACCCAATGAATATAAAAGGAGTGGGAAAT CCAAAAACGGGCAATTTAAAAGAAGTTGTTAAAATGATTGAAGAGTTAGGACTAACTCCAAAAATAAAAAAATAA
Upstream 100 bases:
>100_bases CATTTTTATGTCATAAGAATAATTTATTTTTAAATTAAATATATTAAATTTATAAACCTCCACAGGCAACCAATATAATA TATAATAAATCGGTGATTTA
Downstream 100 bases:
>100_bases ATTGGGGCATTATGAAAAATCTAATCGGAATTAACCCAAATCAAAGATTGGTGGCAATAACCAGGATGTATAGGGATATT GCAGAAATAATCGATATAGA
Product: biotin synthase
Products: biotin
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MDFSHIRDNFENLKEDTSKENLKNGLISKEDALKLFNISKGNDYLNLFSIASEVRDYFKKEIEIISSIHITNICSVNPKC YYCGFAAGTSKEGYYEPFRTTDEEIKNSAIAIEKSGIMRVSCSSAHGYGGKETLRTLKIVKENTNLEVLVNAGADFTENC IKELKKHDIDIICCNLETINNKVFKSVKPGEDLENRINICKLVKKYDINLSSGLLLGIGESYEDRANHLLFLKELPVDEI PIMGFNPYKDTPMENHPKCSALEQAKTIAISRLMFPDIRITSPTPTIGAELVQFALMGGASNIATVIPDNHPMNIKGVGN PKTGNLKEVVKMIEELGLTPKIKK
Sequences:
>Translated_344_residues MDFSHIRDNFENLKEDTSKENLKNGLISKEDALKLFNISKGNDYLNLFSIASEVRDYFKKEIEIISSIHITNICSVNPKC YYCGFAAGTSKEGYYEPFRTTDEEIKNSAIAIEKSGIMRVSCSSAHGYGGKETLRTLKIVKENTNLEVLVNAGADFTENC IKELKKHDIDIICCNLETINNKVFKSVKPGEDLENRINICKLVKKYDINLSSGLLLGIGESYEDRANHLLFLKELPVDEI PIMGFNPYKDTPMENHPKCSALEQAKTIAISRLMFPDIRITSPTPTIGAELVQFALMGGASNIATVIPDNHPMNIKGVGN PKTGNLKEVVKMIEELGLTPKIKK >Mature_344_residues MDFSHIRDNFENLKEDTSKENLKNGLISKEDALKLFNISKGNDYLNLFSIASEVRDYFKKEIEIISSIHITNICSVNPKC YYCGFAAGTSKEGYYEPFRTTDEEIKNSAIAIEKSGIMRVSCSSAHGYGGKETLRTLKIVKENTNLEVLVNAGADFTENC IKELKKHDIDIICCNLETINNKVFKSVKPGEDLENRINICKLVKKYDINLSSGLLLGIGESYEDRANHLLFLKELPVDEI PIMGFNPYKDTPMENHPKCSALEQAKTIAISRLMFPDIRITSPTPTIGAELVQFALMGGASNIATVIPDNHPMNIKGVGN PKTGNLKEVVKMIEELGLTPKIKK
Specific function: Biotin biosynthesis; last step. [C]
COG id: COG0502
COG function: function code H; Biotin synthase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR010722 - InterPro: IPR006638 - InterPro: IPR007197 [H]
Pfam domain/function: PF06968 BATS; PF04055 Radical_SAM [H]
EC number: 2.8.1.6
Molecular weight: Translated: 38373; Mature: 38373
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFSHIRDNFENLKEDTSKENLKNGLISKEDALKLFNISKGNDYLNLFSIASEVRDYFKK CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH EIEIISSIHITNICSVNPKCYYCGFAAGTSKEGYYEPFRTTDEEIKNSAIAIEKSGIMRV HHHHHHHHHEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHHCCCEEEEECCCEEEE SCSSAHGYGGKETLRTLKIVKENTNLEVLVNAGADFTENCIKELKKHDIDIICCNLETIN EECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECHHHHH NKVFKSVKPGEDLENRINICKLVKKYDINLSSGLLLGIGESYEDRANHLLFLKELPVDEI HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHCCEEEEEECCCCCCC PIMGFNPYKDTPMENHPKCSALEQAKTIAISRLMFPDIRITSPTPTIGAELVQFALMGGA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHCCC SNIATVIPDNHPMNIKGVGNPKTGNLKEVVKMIEELGLTPKIKK CCEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MDFSHIRDNFENLKEDTSKENLKNGLISKEDALKLFNISKGNDYLNLFSIASEVRDYFKK CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH EIEIISSIHITNICSVNPKCYYCGFAAGTSKEGYYEPFRTTDEEIKNSAIAIEKSGIMRV HHHHHHHHHEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHHCCCEEEEECCCEEEE SCSSAHGYGGKETLRTLKIVKENTNLEVLVNAGADFTENCIKELKKHDIDIICCNLETIN EECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECHHHHH NKVFKSVKPGEDLENRINICKLVKKYDINLSSGLLLGIGESYEDRANHLLFLKELPVDEI HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHCCEEEEEECCCCCCC PIMGFNPYKDTPMENHPKCSALEQAKTIAISRLMFPDIRITSPTPTIGAELVQFALMGGA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHCCC SNIATVIPDNHPMNIKGVGNPKTGNLKEVVKMIEELGLTPKIKK CCEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Fe2+ [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.002 {dethiobiotin}} [C]
Substrates: dethiobiotin; sulfur
Specific reaction: dethiobiotin + sulfur = biotin
General reaction: Sulfur atom transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]