| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is tyrA [C]
Identifier: 150401448
GI number: 150401448
Start: 1051363
End: 1052706
Strand: Reverse
Name: tyrA [C]
Synonym: Maeo_1024
Alternate gene names: 150401448
Gene position: 1052706-1051363 (Counterclockwise)
Preceding gene: 150401453
Following gene: 150401444
Centisome position: 67.07
GC content: 29.69
Gene sequence:
>1344_bases ATGATAATATCAATAATAGGCGGAACAGATGGATTAGGGAAATGGTTTGCAAAATATTTAAGCAGTAAAGGATATTCTGT AATAGTTAGTGGTAGAGATAAAGAAAAAGGAGAAGCAGTTGAAAAAGAATTGGGGGTAATATATACGCAGGACAATATTG AAGCCACAAAAAAAGGAGATATTGTAATTTTGGCAGTTCCTATAAATATTACTGAATGGATGATTAAAGAGTTGGCACCC CATGTAAGGGAAAATTGTGTTTTAATGGATATTACCTCTATAAAAGAAATTCCAACAAAGGCCATGTTAAAATATGCAAA AAAAGATACATTTATAATGCCCACCCATCCAATGTTTGGACCTTCTACGCCATCTTTAAGAAGGCAGGTTGTTATATTAA CACCACCTACCAAGGAACATGAAAATAACCCCTGGTTTATTAAAATAAAAAACTTTTTTGAAGAAGAGGGGGCCCGGGTA ATTATAATTCCACCAGAAAAACATGATAAAATTATGGGCGTTGTTCAGGGACTAACTCATTATTCATATATAGTTCTTGG TTCGACATTAAGGGAGTTGAATATAGATATAAAAGAATCGCGAAAATACGCCTCCCCAATATATGAATTAATGATAAATA TTATAGCAAGAATTATTGGGCAAAATCCTTATTTGTATGCCGATATACAGATGCACAATCCACAAATAAATGATATTCAT CAAACATTTATAAATGAGTGCGAAAAAATAAAGGAAATAGTTGAAAACAACGACAGAGAAGCATTTGCAAAACTAATGAA AGAATCCTCAAAACACTTTGGAAATGAAACTATAAAAGGAATGAATTATTCTGATAAAGCCGTAGGGGCAATAACTCGGG AAGTAGATAAGCTAAAAAAATCAATTGGTAAAGAGGCTGGTTTAAAACATGCCTACTCCAATAAAGTTCATTTTGGAATT GTGAAAGATGTAGTTGATGATTTTATAATATTGGATAAACAAGGCAAGGATTTAAAATTAAGCATTGCAAATACCAATTT AATGACAAAAGAAGAATTAAAACAATGGAAGGAGGCAAATTTAAAAAAATATTATAATGATATTTCATTTTTATTTAAAG ATAATATAGACATTGATATAATACTAGAATTATTAAAAAGTAAATATAATATTGAAATAATTGATGTTTATAAAGGAGCT CCCATACAGGAAGGATATAAAAGTATCACATTTAGAATATATTCATTTAAAAAACAAGATTTAGAAAATTTGAGGAGCTC CCTTATAAGAACTGTGGAAAATATTGGAGGAATTAAACGATACAATACAGATATTTTAAATTAA
Upstream 100 bases:
>100_bases CCTAATTTATCTGTCGATTCACTATATATATAATAAATTATCTAATATATCATATCATTATTTATACAATATAATAAAAA ATAATAAAAAAAGGAATATT
Downstream 100 bases:
>100_bases TATATTTTGATAACAACAGATAATGTCTATTATTTATTATCTATTATTTTTACTTATTCTATTATTTTTATTTATTTATC TATTGCTTATTTATATATTA
Product: prephenate dehydrogenase
Products: 4-hydroxyphenylpyruvate; CO2; NADH
Alternate protein names: NA
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MIISIIGGTDGLGKWFAKYLSSKGYSVIVSGRDKEKGEAVEKELGVIYTQDNIEATKKGDIVILAVPINITEWMIKELAP HVRENCVLMDITSIKEIPTKAMLKYAKKDTFIMPTHPMFGPSTPSLRRQVVILTPPTKEHENNPWFIKIKNFFEEEGARV IIIPPEKHDKIMGVVQGLTHYSYIVLGSTLRELNIDIKESRKYASPIYELMINIIARIIGQNPYLYADIQMHNPQINDIH QTFINECEKIKEIVENNDREAFAKLMKESSKHFGNETIKGMNYSDKAVGAITREVDKLKKSIGKEAGLKHAYSNKVHFGI VKDVVDDFIILDKQGKDLKLSIANTNLMTKEELKQWKEANLKKYYNDISFLFKDNIDIDIILELLKSKYNIEIIDVYKGA PIQEGYKSITFRIYSFKKQDLENLRSSLIRTVENIGGIKRYNTDILN
Sequences:
>Translated_447_residues MIISIIGGTDGLGKWFAKYLSSKGYSVIVSGRDKEKGEAVEKELGVIYTQDNIEATKKGDIVILAVPINITEWMIKELAP HVRENCVLMDITSIKEIPTKAMLKYAKKDTFIMPTHPMFGPSTPSLRRQVVILTPPTKEHENNPWFIKIKNFFEEEGARV IIIPPEKHDKIMGVVQGLTHYSYIVLGSTLRELNIDIKESRKYASPIYELMINIIARIIGQNPYLYADIQMHNPQINDIH QTFINECEKIKEIVENNDREAFAKLMKESSKHFGNETIKGMNYSDKAVGAITREVDKLKKSIGKEAGLKHAYSNKVHFGI VKDVVDDFIILDKQGKDLKLSIANTNLMTKEELKQWKEANLKKYYNDISFLFKDNIDIDIILELLKSKYNIEIIDVYKGA PIQEGYKSITFRIYSFKKQDLENLRSSLIRTVENIGGIKRYNTDILN >Mature_447_residues MIISIIGGTDGLGKWFAKYLSSKGYSVIVSGRDKEKGEAVEKELGVIYTQDNIEATKKGDIVILAVPINITEWMIKELAP HVRENCVLMDITSIKEIPTKAMLKYAKKDTFIMPTHPMFGPSTPSLRRQVVILTPPTKEHENNPWFIKIKNFFEEEGARV IIIPPEKHDKIMGVVQGLTHYSYIVLGSTLRELNIDIKESRKYASPIYELMINIIARIIGQNPYLYADIQMHNPQINDIH QTFINECEKIKEIVENNDREAFAKLMKESSKHFGNETIKGMNYSDKAVGAITREVDKLKKSIGKEAGLKHAYSNKVHFGI VKDVVDDFIILDKQGKDLKLSIANTNLMTKEELKQWKEANLKKYYNDISFLFKDNIDIDIILELLKSKYNIEIIDVYKGA PIQEGYKSITFRIYSFKKQDLENLRSSLIRTVENIGGIKRYNTDILN
Specific function: Tyrosine biosynthesis [C]
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
Organism=Escherichia coli, GI1788952, Length=274, Percent_Identity=30.2919708029197, Blast_Score=135, Evalue=8e-33, Organism=Saccharomyces cerevisiae, GI6319643, Length=286, Percent_Identity=23.7762237762238, Blast_Score=71, Evalue=3e-13,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR005121 - InterPro: IPR008299 - InterPro: IPR003099 [H]
Pfam domain/function: PF03147 FDX-ACB; PF02153 PDH [H]
EC number: 1.3.1.12
Molecular weight: Translated: 51196; Mature: 51196
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIISIIGGTDGLGKWFAKYLSSKGYSVIVSGRDKEKGEAVEKELGVIYTQDNIEATKKGD CEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCEEEECCCCCCCCCCC IVILAVPINITEWMIKELAPHVRENCVLMDITSIKEIPTKAMLKYAKKDTFIMPTHPMFG EEEEEECCCHHHHHHHHHHHHHHCCEEEEEEHHHHHCCHHHHHHHHCCCCEEECCCCCCC PSTPSLRRQVVILTPPTKEHENNPWFIKIKNFFEEEGARVIIIPPEKHDKIMGVVQGLTH CCCCCCCCEEEEECCCCCCCCCCCEEEEEEHHHHHCCCEEEEECCCCCHHHHHHHHHHHH YSYIVLGSTLRELNIDIKESRKYASPIYELMINIIARIIGQNPYLYADIQMHNPQINDIH HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHH QTFINECEKIKEIVENNDREAFAKLMKESSKHFGNETIKGMNYSDKAVGAITREVDKLKK HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHH SIGKEAGLKHAYSNKVHFGIVKDVVDDFIILDKQGKDLKLSIANTNLMTKEELKQWKEAN HHCHHHCCCHHHCCCEEEHHHHHHHHHEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHH LKKYYNDISFLFKDNIDIDIILELLKSKYNIEIIDVYKGAPIQEGYKSITFRIYSFKKQD HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHEEEEEEEHHHHH LENLRSSLIRTVENIGGIKRYNTDILN HHHHHHHHHHHHHHCCCCEECCCCCCC >Mature Secondary Structure MIISIIGGTDGLGKWFAKYLSSKGYSVIVSGRDKEKGEAVEKELGVIYTQDNIEATKKGD CEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCEEEECCCCCCCCCCC IVILAVPINITEWMIKELAPHVRENCVLMDITSIKEIPTKAMLKYAKKDTFIMPTHPMFG EEEEEECCCHHHHHHHHHHHHHHCCEEEEEEHHHHHCCHHHHHHHHCCCCEEECCCCCCC PSTPSLRRQVVILTPPTKEHENNPWFIKIKNFFEEEGARVIIIPPEKHDKIMGVVQGLTH CCCCCCCCEEEEECCCCCCCCCCCEEEEEEHHHHHCCCEEEEECCCCCHHHHHHHHHHHH YSYIVLGSTLRELNIDIKESRKYASPIYELMINIIARIIGQNPYLYADIQMHNPQINDIH HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHH QTFINECEKIKEIVENNDREAFAKLMKESSKHFGNETIKGMNYSDKAVGAITREVDKLKK HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHH SIGKEAGLKHAYSNKVHFGIVKDVVDDFIILDKQGKDLKLSIANTNLMTKEELKQWKEAN HHCHHHCCCHHHCCCEEEHHHHHHHHHEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHH LKKYYNDISFLFKDNIDIDIILELLKSKYNIEIIDVYKGAPIQEGYKSITFRIYSFKKQD HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHEEEEEEEHHHHH LENLRSSLIRTVENIGGIKRYNTDILN HHHHHHHHHHHHHHCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: prephenate; NAD+
Specific reaction: prephenate + NAD+ = 4-hydroxyphenylpyruvate + CO2 + NADH
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]