| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401445
Identifier: 150401445
GI number: 150401445
Start: 1047692
End: 1048282
Strand: Direct
Name: 150401445
Synonym: Maeo_1021
Alternate gene names: NA
Gene position: 1047692-1048282 (Clockwise)
Preceding gene: 150401443
Following gene: 150401446
Centisome position: 66.75
GC content: 30.12
Gene sequence:
>591_bases ATGATGGATTTATTTAAATTTAATTCTATTGAAATTAGAGATTTGGCAGTTTCAACTTTTGCAATTGCTTTAATATTTGC CTGGAATGGCGGGAGCATAATTCCCATAATAAATATGAATTTTATAATTACATTTATAGTAATACTTATCGCCGTTGGAA CTGGTTTTGTATTGCATGAATTGGCACATAGAACAGTAGCCAGACATTTTGGAGCAATAAGCGAATTTAGAGCTTGGTAT AATGGATTAGCTATTGCATTGGTATTAAAAATACTTATTGGAACAACATTTATAGCCCCTGGTGCTGTTTATATTTGGAA AGATTATTTAACATCTCGTGAAAATGGATTAATCTCTATTGCTGGACCACTTACAAATGTAGCTTTGGCTATTGTATTTT ATATGTTTTATTTAATGCATATTCCGATAATATCGGACATAGGATACCATGGATACTACATAAACATATTTCTTGCTGGA TTCAACATGATACCGATACCACCATTTGATGGAAGTAAAATTTTAAGTTGGAATCCAAAAATTTATTTATTAACTACAAT TCCATTGGCATATTTGATATTTTTCCATTAA
Upstream 100 bases:
>100_bases TATAAATTATAATTATTAGATAAATTAATAAGGAGTATCGAACTTAATTATAATATTACGAATAATAATTCTTTTAAAAA TAATACATTATGGTGTAAAT
Downstream 100 bases:
>100_bases GGGGGTATTATGGAATATAATAACAATACAAATAACAATACAGAACAAAACAATGATAATAACGAAATTTACAAAGATGG GGGTTTTGAGCTCTGGATTA
Product: peptidase M50
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MMDLFKFNSIEIRDLAVSTFAIALIFAWNGGSIIPIINMNFIITFIVILIAVGTGFVLHELAHRTVARHFGAISEFRAWY NGLAIALVLKILIGTTFIAPGAVYIWKDYLTSRENGLISIAGPLTNVALAIVFYMFYLMHIPIISDIGYHGYYINIFLAG FNMIPIPPFDGSKILSWNPKIYLLTTIPLAYLIFFH
Sequences:
>Translated_196_residues MMDLFKFNSIEIRDLAVSTFAIALIFAWNGGSIIPIINMNFIITFIVILIAVGTGFVLHELAHRTVARHFGAISEFRAWY NGLAIALVLKILIGTTFIAPGAVYIWKDYLTSRENGLISIAGPLTNVALAIVFYMFYLMHIPIISDIGYHGYYINIFLAG FNMIPIPPFDGSKILSWNPKIYLLTTIPLAYLIFFH >Mature_196_residues MMDLFKFNSIEIRDLAVSTFAIALIFAWNGGSIIPIINMNFIITFIVILIAVGTGFVLHELAHRTVARHFGAISEFRAWY NGLAIALVLKILIGTTFIAPGAVYIWKDYLTSRENGLISIAGPLTNVALAIVFYMFYLMHIPIISDIGYHGYYINIFLAG FNMIPIPPFDGSKILSWNPKIYLLTTIPLAYLIFFH
Specific function: Unknown
COG id: COG1994
COG function: function code R; Zn-dependent proteases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M50B family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008915 [H]
Pfam domain/function: PF02163 Peptidase_M50 [H]
EC number: NA
Molecular weight: Translated: 22025; Mature: 22025
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDLFKFNSIEIRDLAVSTFAIALIFAWNGGSIIPIINMNFIITFIVILIAVGTGFVLHE CCCCEECCCEEHHHHHHHHHEEEEEEEECCCCEEEEECHHHHHHHHHHHHHHCCHHHHHH LAHRTVARHFGAISEFRAWYNGLAIALVLKILIGTTFIAPGAVYIWKDYLTSRENGLISI HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCEEEE AGPLTNVALAIVFYMFYLMHIPIISDIGYHGYYINIFLAGFNMIPIPPFDGSKILSWNPK CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEECCCCCCCCEEEEECCC IYLLTTIPLAYLIFFH EEEEEHHHHHHHHHCC >Mature Secondary Structure MMDLFKFNSIEIRDLAVSTFAIALIFAWNGGSIIPIINMNFIITFIVILIAVGTGFVLHE CCCCEECCCEEHHHHHHHHHEEEEEEEECCCCEEEEECHHHHHHHHHHHHHHCCHHHHHH LAHRTVARHFGAISEFRAWYNGLAIALVLKILIGTTFIAPGAVYIWKDYLTSRENGLISI HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCEEEE AGPLTNVALAIVFYMFYLMHIPIISDIGYHGYYINIFLAGFNMIPIPPFDGSKILSWNPK CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEECCCCCCCCEEEEECCC IYLLTTIPLAYLIFFH EEEEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]