| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401446
Identifier: 150401446
GI number: 150401446
Start: 1048292
End: 1049047
Strand: Direct
Name: 150401446
Synonym: Maeo_1022
Alternate gene names: NA
Gene position: 1048292-1049047 (Clockwise)
Preceding gene: 150401445
Following gene: 150401447
Centisome position: 66.79
GC content: 29.1
Gene sequence:
>756_bases ATGGAATATAATAACAATACAAATAACAATACAGAACAAAACAATGATAATAACGAAATTTACAAAGATGGGGGTTTTGA GCTCTGGATTAGGATTATTAAGGAAAGTATTGATAAAAAAAATATAGAGCCGTGGAATATCAATATATCCGAAATAGCTG ATGAATATATAAAAACTATCAGGGAGCTCCGTCAATTTGATATAAGATTGTCCGCCGATGTGGTGCTTGTTGGTAGTGTG CTATTAAGAATGAAATCACAAATATTATATGGGGAATGTGAAAACACATTCAATGATGACAAAGAAGACCTAGAAATAGA ATCCGAAGGTGAAGAATTTGGAGAATATTACGAAGATGACAACAATATCGAAATAAACGAAAATTTAGAAGACAAAAATG ATAAAAAGGGGAAAAAAGGGAAAAAGGAAAAAACAATTACATTTAATGATTTAATTAATACATTAAAATCCGAACTTGAT AAAGCCAAAAAACCTAAAAAATTCAAAAATAAAACAAAAGGAACTGCTGCTGTGTTTGAACTTATGGAGGACCTTGAAGA GGAAGAAGATATTTCTGATATAATGGAATATCTTTTAAAGGAGCTCCACTGCGGAGAGATTATATTTCAAAAAAAATTCC AAAATCCAAAAGATATTGTAAAGAATTTTTTACCCTCCCTTTATCTTGCAAACGATGGAACCATTGAAATTTATCAGAAA GAATTATTTAAAGAGATTATTTTAAAATGTAAATAA
Upstream 100 bases:
>100_bases ACCATTTGATGGAAGTAAAATTTTAAGTTGGAATCCAAAAATTTATTTATTAACTACAATTCCATTGGCATATTTGATAT TTTTCCATTAAGGGGGTATT
Downstream 100 bases:
>100_bases CAATATATAGTCAATCTTCGGCCTTTTTCATAAATATGCTATGATGAAAAGCTAAAATCTTATATCATAATAAATTAGGA AATTCATTTACAAAAGCTAT
Product: chromosome segregation and condensation protein ScpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MEYNNNTNNNTEQNNDNNEIYKDGGFELWIRIIKESIDKKNIEPWNINISEIADEYIKTIRELRQFDIRLSADVVLVGSV LLRMKSQILYGECENTFNDDKEDLEIESEGEEFGEYYEDDNNIEINENLEDKNDKKGKKGKKEKTITFNDLINTLKSELD KAKKPKKFKNKTKGTAAVFELMEDLEEEEDISDIMEYLLKELHCGEIIFQKKFQNPKDIVKNFLPSLYLANDGTIEIYQK ELFKEIILKCK
Sequences:
>Translated_251_residues MEYNNNTNNNTEQNNDNNEIYKDGGFELWIRIIKESIDKKNIEPWNINISEIADEYIKTIRELRQFDIRLSADVVLVGSV LLRMKSQILYGECENTFNDDKEDLEIESEGEEFGEYYEDDNNIEINENLEDKNDKKGKKGKKEKTITFNDLINTLKSELD KAKKPKKFKNKTKGTAAVFELMEDLEEEEDISDIMEYLLKELHCGEIIFQKKFQNPKDIVKNFLPSLYLANDGTIEIYQK ELFKEIILKCK >Mature_251_residues MEYNNNTNNNTEQNNDNNEIYKDGGFELWIRIIKESIDKKNIEPWNINISEIADEYIKTIRELRQFDIRLSADVVLVGSV LLRMKSQILYGECENTFNDDKEDLEIESEGEEFGEYYEDDNNIEINENLEDKNDKKGKKGKKEKTITFNDLINTLKSELD KAKKPKKFKNKTKGTAAVFELMEDLEEEEDISDIMEYLLKELHCGEIIFQKKFQNPKDIVKNFLPSLYLANDGTIEIYQK ELFKEIILKCK
Specific function: Unknown
COG id: COG1354
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003768 [H]
Pfam domain/function: PF02616 ScpA_ScpB [H]
EC number: NA
Molecular weight: Translated: 29523; Mature: 29523
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYNNNTNNNTEQNNDNNEIYKDGGFELWIRIIKESIDKKNIEPWNINISEIADEYIKTI CCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH RELRQFDIRLSADVVLVGSVLLRMKSQILYGECENTFNDDKEDLEIESEGEEFGEYYEDD HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHCCC NNIEINENLEDKNDKKGKKGKKEKTITFNDLINTLKSELDKAKKPKKFKNKTKGTAAVFE CCEEECCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHH LMEDLEEEEDISDIMEYLLKELHCGEIIFQKKFQNPKDIVKNFLPSLYLANDGTIEIYQK HHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHCCEEECCCCCHHHHHH ELFKEIILKCK HHHHHHHHCCC >Mature Secondary Structure MEYNNNTNNNTEQNNDNNEIYKDGGFELWIRIIKESIDKKNIEPWNINISEIADEYIKTI CCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH RELRQFDIRLSADVVLVGSVLLRMKSQILYGECENTFNDDKEDLEIESEGEEFGEYYEDD HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHCCC NNIEINENLEDKNDKKGKKGKKEKTITFNDLINTLKSELDKAKKPKKFKNKTKGTAAVFE CCEEECCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHH LMEDLEEEEDISDIMEYLLKELHCGEIIFQKKFQNPKDIVKNFLPSLYLANDGTIEIYQK HHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHCCEEECCCCCHHHHHH ELFKEIILKCK HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]