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The map label for this gene is secF [C]

Identifier: 150401440

GI number: 150401440

Start: 1042814

End: 1043656

Strand: Direct

Name: secF [C]

Synonym: Maeo_1016

Alternate gene names: 150401440

Gene position: 1042814-1043656 (Clockwise)

Preceding gene: 150401439

Following gene: 150401441

Centisome position: 66.44

GC content: 34.16

Gene sequence:

>843_bases
ATGAAGCTAAATTATAAACTAATAGCACTGATACCCATCATATTAACCATAATAGCGGGTGTTTTCACATATACTAATGG
ATTAAAAGAAAGTATAGATGTTAGTGGCGGAACTGAAATTACAATAATGGCAGACAATATTCAACTTGATGAGTTAAAGG
CCACCCTTCCAAAAGATGTTGAAATAAGAACTGCCAAATCCTCTTCGGGGACATTTGTGATAATAACAGCAGGCAAAAAT
GCCGATATTGGCGAAATAGATAAAAATCTGAGAAATTTTTTCAATGTCAATAATTTAAATGAGCTCCAATATTCCCAAAA
ACAAATTGGTGCATCATTAAGTTCCCAATTTTGGAGGGATGGTCTAACAGCAGTTGGATTTGCCTTCGCATTTATGGCCA
TTGTGGTATGGATGACATTTAGAACGCCAATTCCAAGCGCTGCGGTTGTCCTTGCAGCAGTTTCAGACATAATATTGGCA
GTAGCAGGAATGAGTTTATTCAATATACCAATATCAACGGCTACTGTGGCGGCTTTATTAATGTTACTTGGTTATAGTGT
TGATACAGACATTATGTTAACAACAAAAATATTGAAAAGAAGAAAAGGAACGCTGGACGAAAGAATAAAAGAGTCAATGA
GAACGGGAATAACAATGTCTATGACTACCATAATTGCAATGTTTGTACTCTATATGGTTGTAGTATATATTGTCCCAGCC
GCAGACATATTGAAAAATATTTCAGCAGTTATATTATTTGGATTAATTGCGGATTTAATGACAACATGGATGACAAATGT
TGGAATATTAAGATATTATGTTGAACGAAAAAAGAAAAATTAA

Upstream 100 bases:

>100_bases
TTCACCCAAAGAAAAATTTTTTGGATATGCCATAAATTGTATCTCGTAGTATATATTACCATATCATATATTCAGATATA
TTCGATATTTGTGTGATAAA

Downstream 100 bases:

>100_bases
CTAATTAATTAACTAATTAATTAACTAATTAAATATAATCATATCTGATAATTCGGAGCTCCATAATTGGGTTGTAGGGA
GCTCCCACAATAATCAAAAA

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKLNYKLIALIPIILTIIAGVFTYTNGLKESIDVSGGTEITIMADNIQLDELKATLPKDVEIRTAKSSSGTFVIITAGKN
ADIGEIDKNLRNFFNVNNLNELQYSQKQIGASLSSQFWRDGLTAVGFAFAFMAIVVWMTFRTPIPSAAVVLAAVSDIILA
VAGMSLFNIPISTATVAALLMLLGYSVDTDIMLTTKILKRRKGTLDERIKESMRTGITMSMTTIIAMFVLYMVVVYIVPA
ADILKNISAVILFGLIADLMTTWMTNVGILRYYVERKKKN

Sequences:

>Translated_280_residues
MKLNYKLIALIPIILTIIAGVFTYTNGLKESIDVSGGTEITIMADNIQLDELKATLPKDVEIRTAKSSSGTFVIITAGKN
ADIGEIDKNLRNFFNVNNLNELQYSQKQIGASLSSQFWRDGLTAVGFAFAFMAIVVWMTFRTPIPSAAVVLAAVSDIILA
VAGMSLFNIPISTATVAALLMLLGYSVDTDIMLTTKILKRRKGTLDERIKESMRTGITMSMTTIIAMFVLYMVVVYIVPA
ADILKNISAVILFGLIADLMTTWMTNVGILRYYVERKKKN
>Mature_280_residues
MKLNYKLIALIPIILTIIAGVFTYTNGLKESIDVSGGTEITIMADNIQLDELKATLPKDVEIRTAKSSSGTFVIITAGKN
ADIGEIDKNLRNFFNVNNLNELQYSQKQIGASLSSQFWRDGLTAVGFAFAFMAIVVWMTFRTPIPSAAVVLAAVSDIILA
VAGMSLFNIPISTATVAALLMLLGYSVDTDIMLTTKILKRRKGTLDERIKESMRTGITMSMTTIIAMFVLYMVVVYIVPA
ADILKNISAVILFGLIADLMTTWMTNVGILRYYVERKKKN

Specific function: Involved In Protein Export. [C]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813 [H]

Pfam domain/function: PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 30784; Mature: 30784

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNYKLIALIPIILTIIAGVFTYTNGLKESIDVSGGTEITIMADNIQLDELKATLPKDV
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEEEECCCCHHHHHHCCCCCC
EIRTAKSSSGTFVIITAGKNADIGEIDKNLRNFFNVNNLNELQYSQKQIGASLSSQFWRD
EEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC
GLTAVGFAFAFMAIVVWMTFRTPIPSAAVVLAAVSDIILAVAGMSLFNIPISTATVAALL
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
MLLGYSVDTDIMLTTKILKRRKGTLDERIKESMRTGITMSMTTIIAMFVLYMVVVYIVPA
HHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCH
ADILKNISAVILFGLIADLMTTWMTNVGILRYYVERKKKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLNYKLIALIPIILTIIAGVFTYTNGLKESIDVSGGTEITIMADNIQLDELKATLPKDV
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEEEEECCCCHHHHHHCCCCCC
EIRTAKSSSGTFVIITAGKNADIGEIDKNLRNFFNVNNLNELQYSQKQIGASLSSQFWRD
EEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC
GLTAVGFAFAFMAIVVWMTFRTPIPSAAVVLAAVSDIILAVAGMSLFNIPISTATVAALL
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
MLLGYSVDTDIMLTTKILKRRKGTLDERIKESMRTGITMSMTTIIAMFVLYMVVVYIVPA
HHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCH
ADILKNISAVILFGLIADLMTTWMTNVGILRYYVERKKKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]