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The map label for this gene is yccM [C]

Identifier: 150401380

GI number: 150401380

Start: 982510

End: 983199

Strand: Reverse

Name: yccM [C]

Synonym: Maeo_0956

Alternate gene names: 150401380

Gene position: 983199-982510 (Counterclockwise)

Preceding gene: 150401381

Following gene: 150401379

Centisome position: 62.64

GC content: 29.71

Gene sequence:

>690_bases
ATGGATAAGCTCCAAATATTAAGAAAAATATCTCAAACAGCATTTTTTATAAAATTTATTCTATCGGGCAGTTTCTTTTT
AATTTTTATAGGAATTGTAAATACATTCATTACTACGGGAACTATTGGAAAAAATTATATAGTTATATCCATAGTAGTGC
TTGTCTTAACACTGATTTTTGGAAGAGTATTTTGTAGCTGGTGGTGTCCATGGGGATTTCTATTCGAGCTCGGCTATATG
CTGAGGGTTAAATTGTTTAAGTTAAAAAAACTTCCGGAGCTCCCAGAAAACATCCACAATAAATTAATATATTTAAAATA
TGTGGTGTTGTTTTTATTTGTAATATTTATTTATATTCGATTAAGTCCGTATAATGCCTATTTACCGGAATTGGGAATAT
CGGGAAATATAATTTCATTGGCAGTATTGGTGGCATTTACAATAGTTTCATTTTTTATTCCGCGAGCTTTCTGTAAATAT
ATATGTCCTGTTGGGGCATTTTTATCGATACTTTCAATAAAATCTCTGTTTAAATTAAAACTAAATGATAAATGTGTAAA
ATGTAGGTTGTGCGAAAGGAAATGCCCAATGCAAATAAAGCTAACTAAAAATATCGACCAAAAGGATTGTATTCGATGTT
TTGAGTGTAAAAGTGTTTGTAGAAAAGATGGTATAGAGTTTAAACCTTAA

Upstream 100 bases:

>100_bases
AAATTTTGCGGTAGATGTGGGATTTTCGGGCAGAGCTCCTTATAATAAATTTTTTTATAATAAATTCCTCTAACATTTCA
AATATATTTTTGGTGAAACT

Downstream 100 bases:

>100_bases
ACAAGTTATATGGTAGTTGCAATATATGTAGTTTTATTATCTTATTAAATTACTATTTTATTTTTTATATTATTTAATAA
AATTATTTTTAATAATTATG

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MDKLQILRKISQTAFFIKFILSGSFFLIFIGIVNTFITTGTIGKNYIVISIVVLVLTLIFGRVFCSWWCPWGFLFELGYM
LRVKLFKLKKLPELPENIHNKLIYLKYVVLFLFVIFIYIRLSPYNAYLPELGISGNIISLAVLVAFTIVSFFIPRAFCKY
ICPVGAFLSILSIKSLFKLKLNDKCVKCRLCERKCPMQIKLTKNIDQKDCIRCFECKSVCRKDGIEFKP

Sequences:

>Translated_229_residues
MDKLQILRKISQTAFFIKFILSGSFFLIFIGIVNTFITTGTIGKNYIVISIVVLVLTLIFGRVFCSWWCPWGFLFELGYM
LRVKLFKLKKLPELPENIHNKLIYLKYVVLFLFVIFIYIRLSPYNAYLPELGISGNIISLAVLVAFTIVSFFIPRAFCKY
ICPVGAFLSILSIKSLFKLKLNDKCVKCRLCERKCPMQIKLTKNIDQKDCIRCFECKSVCRKDGIEFKP
>Mature_229_residues
MDKLQILRKISQTAFFIKFILSGSFFLIFIGIVNTFITTGTIGKNYIVISIVVLVLTLIFGRVFCSWWCPWGFLFELGYM
LRVKLFKLKKLPELPENIHNKLIYLKYVVLFLFVIFIYIRLSPYNAYLPELGISGNIISLAVLVAFTIVSFFIPRAFCKY
ICPVGAFLSILSIKSLFKLKLNDKCVKCRLCERKCPMQIKLTKNIDQKDCIRCFECKSVCRKDGIEFKP

Specific function: Unknown

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1787226, Length=200, Percent_Identity=30.5, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI1788532, Length=250, Percent_Identity=22.8, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26539; Mature: 26539

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLQILRKISQTAFFIKFILSGSFFLIFIGIVNTFITTGTIGKNYIVISIVVLVLTLIF
CCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
GRVFCSWWCPWGFLFELGYMLRVKLFKLKKLPELPENIHNKLIYLKYVVLFLFVIFIYIR
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LSPYNAYLPELGISGNIISLAVLVAFTIVSFFIPRAFCKYICPVGAFLSILSIKSLFKLK
CCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNDKCVKCRLCERKCPMQIKLTKNIDQKDCIRCFECKSVCRKDGIEFKP
CCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDKLQILRKISQTAFFIKFILSGSFFLIFIGIVNTFITTGTIGKNYIVISIVVLVLTLIF
CCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
GRVFCSWWCPWGFLFELGYMLRVKLFKLKKLPELPENIHNKLIYLKYVVLFLFVIFIYIR
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LSPYNAYLPELGISGNIISLAVLVAFTIVSFFIPRAFCKYICPVGAFLSILSIKSLFKLK
CCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNDKCVKCRLCERKCPMQIKLTKNIDQKDCIRCFECKSVCRKDGIEFKP
CCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]