Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is rfk

Identifier: 150401352

GI number: 150401352

Start: 948073

End: 948459

Strand: Reverse

Name: rfk

Synonym: Maeo_0925

Alternate gene names: 150401352

Gene position: 948459-948073 (Counterclockwise)

Preceding gene: 150401354

Following gene: 150401351

Centisome position: 60.43

GC content: 24.81

Gene sequence:

>387_bases
ATGCTAAATAAATTATTTGGCCGTGTAGTTTCAGGAAAAGGTGAAGGGAAGCACTACATGTCTCTTCCCCCATATAAAGA
AAAATTTAAAAATATTCTTGGATTTGAACCTTATGAAGGCACTTTAAATGTTAAATTAGGATATATAATAAATTTAAACG
AGTTAAATCCTATAGAAGTGGATGATTTTTATTATAAAAATAATAAATACTATGGCGTTAAATTAATACCTGTAAGAATA
TGTATAAAAGATTATTGTGTAAATGGTGCTATCGTATATCCAAAAAAAACTGAGCATCCAAATAATGTAATAGAATTAAT
AGCCCCCATTAAATTGAGAAAATATTTATCTTTAAAAAATAATTATATGGTAAAAATTAGATTATAA

Upstream 100 bases:

>100_bases
ATTCCATCATAACTTATTTATTAAATGAAACCCAATATTAATTAGATTATATTTAAAAATAAATTCAAAAAATATACCTA
TAATATTGGTGATGATTTAA

Downstream 100 bases:

>100_bases
ATTATAATTAAAATTATTGAGCATCTATAAAATAATTTCATTTTAAGAGGTTAAACAATGAGTGAAAATGCTAAAATTGA
AAAAGCCATAAATGATTTAA

Product: riboflavin kinase

Products: NA

Alternate protein names: RFK; CTP-dependent riboflavin kinase; CTP:riboflavin 5'-phosphotransferase; Flavokinase

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MLNKLFGRVVSGKGEGKHYMSLPPYKEKFKNILGFEPYEGTLNVKLGYIINLNELNPIEVDDFYYKNNKYYGVKLIPVRI
CIKDYCVNGAIVYPKKTEHPNNVIELIAPIKLRKYLSLKNNYMVKIRL

Sequences:

>Translated_128_residues
MLNKLFGRVVSGKGEGKHYMSLPPYKEKFKNILGFEPYEGTLNVKLGYIINLNELNPIEVDDFYYKNNKYYGVKLIPVRI
CIKDYCVNGAIVYPKKTEHPNNVIELIAPIKLRKYLSLKNNYMVKIRL
>Mature_128_residues
MLNKLFGRVVSGKGEGKHYMSLPPYKEKFKNILGFEPYEGTLNVKLGYIINLNELNPIEVDDFYYKNNKYYGVKLIPVRI
CIKDYCVNGAIVYPKKTEHPNNVIELIAPIKLRKYLSLKNNYMVKIRL

Specific function: Catalyzes the CTP-dependent phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN)

COG id: COG1339

COG function: function code KH; Transcriptional regulator of a riboflavin/FAD biosynthetic operon

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the archaeal riboflavin kinase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIFK_META3 (A6UVI4)

Other databases:

- EMBL:   CP000743
- RefSeq:   YP_001325118.1
- ProteinModelPortal:   A6UVI4
- SMR:   A6UVI4
- STRING:   A6UVI4
- GeneID:   5326323
- GenomeReviews:   CP000743_GR
- KEGG:   mae:Maeo_0925
- eggNOG:   arNOG11680
- HOGENOM:   HBG553349
- OMA:   PYEGTLN
- ProtClustDB:   PRK14132
- BioCyc:   MAEO419665:MAEO_0925-MONOMER
- HAMAP:   MF_01285
- InterPro:   IPR015865
- InterPro:   IPR002834
- Gene3D:   G3DSA:2.40.30.30

Pfam domain/function: PF01982 CTP-dep_RFKase

EC number: =2.7.1.161

Molecular weight: Translated: 14934; Mature: 14934

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: BINDING 97-97 BINDING 105-105

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKLFGRVVSGKGEGKHYMSLPPYKEKFKNILGFEPYEGTLNVKLGYIINLNELNPIEV
CCHHHHHHEECCCCCCCEEECCCCHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCEEC
DDFYYKNNKYYGVKLIPVRICIKDYCVNGAIVYPKKTEHPNNVIELIAPIKLRKYLSLKN
CCEEEECCEEEEEEEEEEEEEEEHHCCCCEEECCCCCCCCCCCEEECCCHHHHHHCCCCC
NYMVKIRL
CEEEEEEC
>Mature Secondary Structure
MLNKLFGRVVSGKGEGKHYMSLPPYKEKFKNILGFEPYEGTLNVKLGYIINLNELNPIEV
CCHHHHHHEECCCCCCCEEECCCCHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCEEC
DDFYYKNNKYYGVKLIPVRICIKDYCVNGAIVYPKKTEHPNNVIELIAPIKLRKYLSLKN
CCEEEECCEEEEEEEEEEEEEEEHHCCCCEEECCCCCCCCCCCEEECCCHHHHHHCCCCC
NYMVKIRL
CEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA