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The map label for this gene is ribB [H]

Identifier: 150401351

GI number: 150401351

Start: 947326

End: 948015

Strand: Reverse

Name: ribB [H]

Synonym: Maeo_0924

Alternate gene names: 150401351

Gene position: 948015-947326 (Counterclockwise)

Preceding gene: 150401352

Following gene: 150401350

Centisome position: 60.4

GC content: 35.65

Gene sequence:

>690_bases
ATGAGTGAAAATGCTAAAATTGAAAAAGCCATAAATGATTTAAAAAATGGAAAAATGATATTAATTTACGATAGCGATGA
TAGGGAGGGGGAAGCCGATATGGTTGTAGCTTCGGAATTTATAACTCCTGAACACATAAGAACTATGAGAAAAGACGGGG
GAGGATTAATTTGCACAGCAATACACCCAAAATATTGTGAAGCTGTCGGAATTCCTTTTATGATTGATGTGTTCGATTGT
GCAAATGAGAAATTCCCTATTTTAAAAGAATTGTATCCTAATGATATACCATATGATGAAAAATCTTCATTTTCAATAAC
TGTAAATCATAGGAGCACATTTACAGGAATAACTGATAATGATAGGGCACTCACAATAAAAAAATTGGCGGAGCTCCTAA
AAGAAAAAAGATACAATGATTTTGGAAAAGAGTTCAGAGCTCCCGGACATGTGGTGTTGTTGAGGGCATCAGAAGGACTT
TTAAAAAATAGGGAAGGACATACGGAAATGACCGTAGCTCTTGCAGAATTGGCTGGTTTAACTCCAATTACCACAATTTG
CGAAATGATGGGGGACGATGGAAAAGCCATGAGCAGAGCGGAAACCGAAAAATATGCGGAAGAACATGGTTTGGCACATT
TAAACGGGGAAGAATTAATAAATTACTACATGGATAAAATAAACAAATAA

Upstream 100 bases:

>100_bases
TTTATCTTTAAAAAATAATTATATGGTAAAAATTAGATTATAAATTATAATTAAAATTATTGAGCATCTATAAAATAATT
TCATTTTAAGAGGTTAAACA

Downstream 100 bases:

>100_bases
AATAATTTAACATAAAATAGATGAAATATATAATATTTTAAAAATAATATATAATTCGGTGGAATTATGACAATTAAAGT
AGGTATAGCCGATACCACAT

Product: 3,4-dihydroxy-2-butanone 4-phosphate synthase

Products: NA

Alternate protein names: DHBP synthase [H]

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MSENAKIEKAINDLKNGKMILIYDSDDREGEADMVVASEFITPEHIRTMRKDGGGLICTAIHPKYCEAVGIPFMIDVFDC
ANEKFPILKELYPNDIPYDEKSSFSITVNHRSTFTGITDNDRALTIKKLAELLKEKRYNDFGKEFRAPGHVVLLRASEGL
LKNREGHTEMTVALAELAGLTPITTICEMMGDDGKAMSRAETEKYAEEHGLAHLNGEELINYYMDKINK

Sequences:

>Translated_229_residues
MSENAKIEKAINDLKNGKMILIYDSDDREGEADMVVASEFITPEHIRTMRKDGGGLICTAIHPKYCEAVGIPFMIDVFDC
ANEKFPILKELYPNDIPYDEKSSFSITVNHRSTFTGITDNDRALTIKKLAELLKEKRYNDFGKEFRAPGHVVLLRASEGL
LKNREGHTEMTVALAELAGLTPITTICEMMGDDGKAMSRAETEKYAEEHGLAHLNGEELINYYMDKINK
>Mature_228_residues
SENAKIEKAINDLKNGKMILIYDSDDREGEADMVVASEFITPEHIRTMRKDGGGLICTAIHPKYCEAVGIPFMIDVFDCA
NEKFPILKELYPNDIPYDEKSSFSITVNHRSTFTGITDNDRALTIKKLAELLKEKRYNDFGKEFRAPGHVVLLRASEGLL
KNREGHTEMTVALAELAGLTPITTICEMMGDDGKAMSRAETEKYAEEHGLAHLNGEELINYYMDKINK

Specific function: Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate [H]

COG id: COG0108

COG function: function code H; 3,4-dihydroxy-2-butanone 4-phosphate synthase

Gene ontology:

Cell location: Membrane-Associated [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHBP synthase family [H]

Homologues:

Organism=Escherichia coli, GI1789420, Length=218, Percent_Identity=28.4403669724771, Blast_Score=100, Evalue=8e-23,
Organism=Saccharomyces cerevisiae, GI6320695, Length=221, Percent_Identity=29.4117647058824, Blast_Score=102, Evalue=7e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017945
- InterPro:   IPR000422 [H]

Pfam domain/function: PF00926 DHBP_synthase [H]

EC number: =4.1.99.12 [H]

Molecular weight: Translated: 25754; Mature: 25623

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENAKIEKAINDLKNGKMILIYDSDDREGEADMVVASEFITPEHIRTMRKDGGGLICTA
CCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEHHHCCCHHHHHHHHHCCCCEEEEE
IHPKYCEAVGIPFMIDVFDCANEKFPILKELYPNDIPYDEKSSFSITVNHRSTFTGITDN
CCHHHHHHCCCCCEEEHHHCCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCEECCCCCC
DRALTIKKLAELLKEKRYNDFGKEFRAPGHVVLLRASEGLLKNREGHTEMTVALAELAGL
CCEEEHHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCHHCCCCCCHHHHHHHHHHHCC
TPITTICEMMGDDGKAMSRAETEKYAEEHGLAHLNGEELINYYMDKINK
CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SENAKIEKAINDLKNGKMILIYDSDDREGEADMVVASEFITPEHIRTMRKDGGGLICTA
CCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEHHHCCCHHHHHHHHHCCCCEEEEE
IHPKYCEAVGIPFMIDVFDCANEKFPILKELYPNDIPYDEKSSFSITVNHRSTFTGITDN
CCHHHHHHCCCCCEEEHHHCCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCEECCCCCC
DRALTIKKLAELLKEKRYNDFGKEFRAPGHVVLLRASEGLLKNREGHTEMTVALAELAGL
CCEEEHHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCHHCCCCCCHHHHHHHHHHHCC
TPITTICEMMGDDGKAMSRAETEKYAEEHGLAHLNGEELINYYMDKINK
CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]