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The map label for this gene is rps17E

Identifier: 150401336

GI number: 150401336

Start: 934145

End: 934336

Strand: Reverse

Name: rps17E

Synonym: Maeo_0909

Alternate gene names: 150401336

Gene position: 934336-934145 (Counterclockwise)

Preceding gene: 150401337

Following gene: 150401335

Centisome position: 59.53

GC content: 31.77

Gene sequence:

>192_bases
TTGGGAAGAATTAGACAAACATTTATTAAAAGAGCAGGGGAAGACCTTGTAGAAAAATATGAAGACAGATTAACCACAGA
TTTTGAAACAAACAAAAAAGTTATAGATGAGGTTGCAGAGATAGCTACCAAAAGACTTAGAAATAGGGTTGCAGGATATG
TAACTAAAAAAATGAAAAAAGTCGATGCATAA

Upstream 100 bases:

>100_bases
ATATATGGTTGGTTAATATATTTTCGGTAAATTGAATAAAACACAAATATGTAAATATATTATATAATAAATAAATAGGA
GCTCCTATACAGGTGATAAC

Downstream 100 bases:

>100_bases
TCAGTATGGTAGGTATATGTCTTAATTGGTGATTTTATGCAAGGAGTGTTTCCTGCAATTATTACTCCATTTAAAAATGG
GGGAGTAGATTACGAAGGTT

Product: 30S ribosomal protein S17e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 62

Protein sequence:

>63_residues
MGRIRQTFIKRAGEDLVEKYEDRLTTDFETNKKVIDEVAEIATKRLRNRVAGYVTKKMKKVDA

Sequences:

>Translated_63_residues
MGRIRQTFIKRAGEDLVEKYEDRLTTDFETNKKVIDEVAEIATKRLRNRVAGYVTKKMKKVDA
>Mature_62_residues
GRIRQTFIKRAGEDLVEKYEDRLTTDFETNKKVIDEVAEIATKRLRNRVAGYVTKKMKKVDA

Specific function: Unknown

COG id: COG1383

COG function: function code J; Ribosomal protein S17E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S17e family

Homologues:

Organism=Homo sapiens, GI310123351, Length=61, Percent_Identity=50.8196721311475, Blast_Score=71, Evalue=2e-13,
Organism=Homo sapiens, GI310123353, Length=61, Percent_Identity=50.8196721311475, Blast_Score=70, Evalue=3e-13,
Organism=Homo sapiens, GI310123357, Length=61, Percent_Identity=50.8196721311475, Blast_Score=70, Evalue=4e-13,
Organism=Homo sapiens, GI4506693, Length=61, Percent_Identity=50.8196721311475, Blast_Score=70, Evalue=4e-13,
Organism=Homo sapiens, GI310123349, Length=61, Percent_Identity=50.8196721311475, Blast_Score=69, Evalue=7e-13,
Organism=Homo sapiens, GI310123355, Length=61, Percent_Identity=49.1803278688525, Blast_Score=69, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17508695, Length=62, Percent_Identity=48.3870967741936, Blast_Score=68, Evalue=9e-13,
Organism=Saccharomyces cerevisiae, GI6323617, Length=61, Percent_Identity=52.4590163934426, Blast_Score=75, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6320655, Length=61, Percent_Identity=52.4590163934426, Blast_Score=75, Evalue=2e-15,
Organism=Drosophila melanogaster, GI17647889, Length=61, Percent_Identity=52.4590163934426, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS17E_META3 (A6UVG8)

Other databases:

- EMBL:   CP000743
- RefSeq:   YP_001325102.1
- ProteinModelPortal:   A6UVG8
- SMR:   A6UVG8
- STRING:   A6UVG8
- GeneID:   5327072
- GenomeReviews:   CP000743_GR
- KEGG:   mae:Maeo_0909
- eggNOG:   arNOG14336
- HOGENOM:   HBG460442
- OMA:   MAIKPAY
- ProtClustDB:   PRK01151
- BioCyc:   MAEO419665:MAEO_0909-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00511
- InterPro:   IPR001210
- InterPro:   IPR018273
- Gene3D:   G3DSA:1.10.60.20
- PANTHER:   PTHR10732

Pfam domain/function: PF00833 Ribosomal_S17e

EC number: NA

Molecular weight: Translated: 7375; Mature: 7243

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: PS00712 RIBOSOMAL_S17E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRIRQTFIKRAGEDLVEKYEDRLTTDFETNKKVIDEVAEIATKRLRNRVAGYVTKKMKK
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDA
HCC
>Mature Secondary Structure 
GRIRQTFIKRAGEDLVEKYEDRLTTDFETNKKVIDEVAEIATKRLRNRVAGYVTKKMKK
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDA
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA