| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401327
Identifier: 150401327
GI number: 150401327
Start: 925750
End: 927285
Strand: Reverse
Name: 150401327
Synonym: Maeo_0900
Alternate gene names: NA
Gene position: 927285-925750 (Counterclockwise)
Preceding gene: 150401328
Following gene: 150401326
Centisome position: 59.08
GC content: 32.23
Gene sequence:
>1536_bases ATGATAATTGTTATAGGATATGGGACATTTGGTCGTAAAGTAGTGAATAATACTAAAGCCATAGATAAAATTTCAGTAAT TGACAGTAATGCAGTTGTATTTGAATCTGTTGAAGAGGCTGAATTTAATTTTATTGTGGGCGATGCTACCGACGAAACCA TATTAAATAAGGCAGGTATTAAAGATGCCGACACTGTTATAGTATTAACAAATGAAAGAGAAACAAATAAAAAAATCGCG AAATTAGTTTCTAAGCTAAATCCAAAGGCATATTTGATAGTCAGAAATATTGTGCAATATCCTGATTTATACAGTGGTAT TGAAGTCCATAAAATAATTTACCCTGTGGATTGTGCGGCTCATGAGATATTATTGGAAATTGAAAAATCAAAATTAAGAA GAAAATTAATAGATTTAGAAGAAATTGTTAAAGACATTAAAAAGAGATATAATTCTAAAACTTCCAATATCGTCCCCTCC AAAAGTAAGGGGGAAAAGTACAGTACTGGTTCTAAGGATAATAATGTCATCAATGGAATTGATGCCAGTAAATCCGATGA TAATAAGTTAGCCCCCTGTTTAATAATTATGCACAACAACCCAGACCCAGATTCAATAGCTAGTGCAATGGCTTTAAAAA CAATAATGATGAAATGGGGTGTGAGTTCAGATATAGCCTATGGTGGAAAAATAGGTTTTGATGAAAATAAGGCAATGGTT AATTTGTTGGGTGTAAAATTAACGCCTATTGACAATATTGATATAAGTAATTACGAAGGTGTTGCCGTTGTAGATACATC TTCTTCGAAAATAATACCTATTGATACAACTTATAAAATTGATATTTTATTGGACCACCACAATAATGGAGATTTAACTG CAAATTATATGGACATAAGGCCAGATATTGGCGCAACTGCTACTATTTTAACAGAATATTTAAGTCATTTGAACATAGTG CCAAAACAGAAATTGGCAACTGCATTATATTATGCAATATGTACAGATACTAACTATTTTAAAAGAAAAACATCTAAAAA AGATTTTGATGCTGCGGGATATTTACAAGATTTGATGGACCCGAAAACGCTAGACTTAATTGAGAACCCCGACATGGATA CAGAAAGTATGGAGGCTCTTGCAAGAGCAATAACTAATAGGAATATAATTAAAAATAATATAGCTTTGTCTTATGTGGGA CATATTAAAAACCGTGATGCTTTACCAAAAGCTGCGGATTTTTTGCTTAAAATGGAAGGCATAACTACAACTTATGTATT TGGAATATCTGAAAATAAGATACATATTAGTGCAAGAACCAAAGATTTAAGAATAGATATCGGTGAAATAATGAGGACAG CATTTGGTGGGGGAGGGCATCAATCATCAGCTGCTACAAGTATAGACCTCGGAATATTTGAATCAGTCTCAGATAAAAAA TCACTTAAAAATTTGGTTGAAGAAGCAATTAAAACAAGAATATTGGAGGCCATGGGTATTGATGAGACGGATTCCACTAA AAAATATGAGGAATAA
Upstream 100 bases:
>100_bases TAATGCATCTTAATCTTTTTAACTAATAGATAACAAACTTTCTGAACATACTATATACCTTAATTATTTATAAATATTAA TAATTCCTATGAGGGAACTT
Downstream 100 bases:
>100_bases ACACATATGCATTAGGGGGTTAAGGTGGATGATATTATGCTTAAAGAGCTAATAAATAAAATATTATGGCATCCTGATTA TGACGCAAAGGATTATGAAA
Product: TrkA domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 511; Mature: 511
Protein sequence:
>511_residues MIIVIGYGTFGRKVVNNTKAIDKISVIDSNAVVFESVEEAEFNFIVGDATDETILNKAGIKDADTVIVLTNERETNKKIA KLVSKLNPKAYLIVRNIVQYPDLYSGIEVHKIIYPVDCAAHEILLEIEKSKLRRKLIDLEEIVKDIKKRYNSKTSNIVPS KSKGEKYSTGSKDNNVINGIDASKSDDNKLAPCLIIMHNNPDPDSIASAMALKTIMMKWGVSSDIAYGGKIGFDENKAMV NLLGVKLTPIDNIDISNYEGVAVVDTSSSKIIPIDTTYKIDILLDHHNNGDLTANYMDIRPDIGATATILTEYLSHLNIV PKQKLATALYYAICTDTNYFKRKTSKKDFDAAGYLQDLMDPKTLDLIENPDMDTESMEALARAITNRNIIKNNIALSYVG HIKNRDALPKAADFLLKMEGITTTYVFGISENKIHISARTKDLRIDIGEIMRTAFGGGGHQSSAATSIDLGIFESVSDKK SLKNLVEEAIKTRILEAMGIDETDSTKKYEE
Sequences:
>Translated_511_residues MIIVIGYGTFGRKVVNNTKAIDKISVIDSNAVVFESVEEAEFNFIVGDATDETILNKAGIKDADTVIVLTNERETNKKIA KLVSKLNPKAYLIVRNIVQYPDLYSGIEVHKIIYPVDCAAHEILLEIEKSKLRRKLIDLEEIVKDIKKRYNSKTSNIVPS KSKGEKYSTGSKDNNVINGIDASKSDDNKLAPCLIIMHNNPDPDSIASAMALKTIMMKWGVSSDIAYGGKIGFDENKAMV NLLGVKLTPIDNIDISNYEGVAVVDTSSSKIIPIDTTYKIDILLDHHNNGDLTANYMDIRPDIGATATILTEYLSHLNIV PKQKLATALYYAICTDTNYFKRKTSKKDFDAAGYLQDLMDPKTLDLIENPDMDTESMEALARAITNRNIIKNNIALSYVG HIKNRDALPKAADFLLKMEGITTTYVFGISENKIHISARTKDLRIDIGEIMRTAFGGGGHQSSAATSIDLGIFESVSDKK SLKNLVEEAIKTRILEAMGIDETDSTKKYEE >Mature_511_residues MIIVIGYGTFGRKVVNNTKAIDKISVIDSNAVVFESVEEAEFNFIVGDATDETILNKAGIKDADTVIVLTNERETNKKIA KLVSKLNPKAYLIVRNIVQYPDLYSGIEVHKIIYPVDCAAHEILLEIEKSKLRRKLIDLEEIVKDIKKRYNSKTSNIVPS KSKGEKYSTGSKDNNVINGIDASKSDDNKLAPCLIIMHNNPDPDSIASAMALKTIMMKWGVSSDIAYGGKIGFDENKAMV NLLGVKLTPIDNIDISNYEGVAVVDTSSSKIIPIDTTYKIDILLDHHNNGDLTANYMDIRPDIGATATILTEYLSHLNIV PKQKLATALYYAICTDTNYFKRKTSKKDFDAAGYLQDLMDPKTLDLIENPDMDTESMEALARAITNRNIIKNNIALSYVG HIKNRDALPKAADFLLKMEGITTTYVFGISENKIHISARTKDLRIDIGEIMRTAFGGGGHQSSAATSIDLGIFESVSDKK SLKNLVEEAIKTRILEAMGIDETDSTKKYEE
Specific function: Unknown
COG id: COG0618
COG function: function code R; Exopolyphosphatase-related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR003156 - InterPro: IPR001667 - InterPro: IPR003148 [H]
Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 56544; Mature: 56544
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIVIGYGTFGRKVVNNTKAIDKISVIDSNAVVFESVEEAEFNFIVGDATDETILNKAGI CEEEEECCCCCHHHHCCCHHHEEEEEECCCCEEEECCCCCCEEEEEECCCCHHHHHHCCC KDADTVIVLTNERETNKKIAKLVSKLNPKAYLIVRNIVQYPDLYSGIEVHKIIYPVDCAA CCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEEHHHHHCCCHHCCCEEEEEEEECCHHH HEILLEIEKSKLRRKLIDLEEIVKDIKKRYNSKTSNIVPSKSKGEKYSTGSKDNNVINGI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECC DASKSDDNKLAPCLIIMHNNPDPDSIASAMALKTIMMKWGVSSDIAYGGKIGFDENKAMV CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEE NLLGVKLTPIDNIDISNYEGVAVVDTSSSKIIPIDTTYKIDILLDHHNNGDLTANYMDIR EEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEECCEEEEEEEEEECCCCCEEEEEEEEC PDIGATATILTEYLSHLNIVPKQKLATALYYAICTDTNYFKRKTSKKDFDAAGYLQDLMD CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHCC PKTLDLIENPDMDTESMEALARAITNRNIIKNNIALSYVGHIKNRDALPKAADFLLKMEG CCEEHHCCCCCCCHHHHHHHHHHHHCCCEECCCEEEEEEECCCCCCCCCHHHHHHEEECC ITTTYVFGISENKIHISARTKDLRIDIGEIMRTAFGGGGHQSSAATSIDLGIFESVSDKK CEEEEEEEECCCEEEEEEECCEEEEEHHHHHHHHCCCCCCCCCCCCEEEHHHHHCCCHHH SLKNLVEEAIKTRILEAMGIDETDSTKKYEE HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MIIVIGYGTFGRKVVNNTKAIDKISVIDSNAVVFESVEEAEFNFIVGDATDETILNKAGI CEEEEECCCCCHHHHCCCHHHEEEEEECCCCEEEECCCCCCEEEEEECCCCHHHHHHCCC KDADTVIVLTNERETNKKIAKLVSKLNPKAYLIVRNIVQYPDLYSGIEVHKIIYPVDCAA CCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEEHHHHHCCCHHCCCEEEEEEEECCHHH HEILLEIEKSKLRRKLIDLEEIVKDIKKRYNSKTSNIVPSKSKGEKYSTGSKDNNVINGI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECC DASKSDDNKLAPCLIIMHNNPDPDSIASAMALKTIMMKWGVSSDIAYGGKIGFDENKAMV CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEE NLLGVKLTPIDNIDISNYEGVAVVDTSSSKIIPIDTTYKIDILLDHHNNGDLTANYMDIR EEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEECCEEEEEEEEEECCCCCEEEEEEEEC PDIGATATILTEYLSHLNIVPKQKLATALYYAICTDTNYFKRKTSKKDFDAAGYLQDLMD CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHCC PKTLDLIENPDMDTESMEALARAITNRNIIKNNIALSYVGHIKNRDALPKAADFLLKMEG CCEEHHCCCCCCCHHHHHHHHHHHHCCCEECCCEEEEEEECCCCCCCCCHHHHHHEEECC ITTTYVFGISENKIHISARTKDLRIDIGEIMRTAFGGGGHQSSAATSIDLGIFESVSDKK CEEEEEEEECCCEEEEEEECCEEEEEHHHHHHHHCCCCCCCCCCCCEEEHHHHHCCCHHH SLKNLVEEAIKTRILEAMGIDETDSTKKYEE HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]