| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
Click here to switch to the map view.
The map label for this gene is 150401315
Identifier: 150401315
GI number: 150401315
Start: 913108
End: 913389
Strand: Reverse
Name: 150401315
Synonym: Maeo_0888
Alternate gene names: NA
Gene position: 913389-913108 (Counterclockwise)
Preceding gene: 150401316
Following gene: 150401314
Centisome position: 58.2
GC content: 25.18
Gene sequence:
>282_bases ATGAATTTGGAAAAAACTGTTAAAATGGGAGATGCATTATCTAATATTACAAGAATTAAAATAATTCATCTTTTGAATAA AAACCCCATGAATATTTATGAAATGGCAAAAACACTAAATCTATCAAGACCAGTGATATATACCCATTTAAAAAAATTGG AAGAAGCTGATTTGGTAGAAAGTGATTTAATATTGGAAGAAGCTAGGGCTAAAAGAATATATAAATCAAAGGAATTTAAA TTTTACATTGACAATGATAAAATAGATGAATTTTTCAAGTGA
Upstream 100 bases:
>100_bases GAATTGGCAAAAATAGAAAAGGATACTGTGGAAATAAAGGAAACAGTTAAGGAGTTGAAGAAAAAATGGGATGAAATTTA GTGAGGAATTTAGTGATTTT
Downstream 100 bases:
>100_bases TATTATGGATAAACTACAAACTATTAGAAAAATAGTTCAGTCGGCATTTTTTATAAAATTTGTAATTTTATCGGTCTTTC TTTCAAGCTTCTTTTGTCTG
Product: regulatory protein ArsR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MNLEKTVKMGDALSNITRIKIIHLLNKNPMNIYEMAKTLNLSRPVIYTHLKKLEEADLVESDLILEEARAKRIYKSKEFK FYIDNDKIDEFFK
Sequences:
>Translated_93_residues MNLEKTVKMGDALSNITRIKIIHLLNKNPMNIYEMAKTLNLSRPVIYTHLKKLEEADLVESDLILEEARAKRIYKSKEFK FYIDNDKIDEFFK >Mature_93_residues MNLEKTVKMGDALSNITRIKIIHLLNKNPMNIYEMAKTLNLSRPVIYTHLKKLEEADLVESDLILEEARAKRIYKSKEFK FYIDNDKIDEFFK
Specific function: Unknown
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001845 - InterPro: IPR011991 [H]
Pfam domain/function: PF01022 HTH_5 [H]
EC number: NA
Molecular weight: Translated: 11034; Mature: 11034
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLEKTVKMGDALSNITRIKIIHLLNKNPMNIYEMAKTLNLSRPVIYTHLKKLEEADLVE CCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH SDLILEEARAKRIYKSKEFKFYIDNDKIDEFFK HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCC >Mature Secondary Structure MNLEKTVKMGDALSNITRIKIIHLLNKNPMNIYEMAKTLNLSRPVIYTHLKKLEEADLVE CCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH SDLILEEARAKRIYKSKEFKFYIDNDKIDEFFK HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]