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The map label for this gene is yccM [C]

Identifier: 150401314

GI number: 150401314

Start: 912381

End: 913103

Strand: Reverse

Name: yccM [C]

Synonym: Maeo_0887

Alternate gene names: 150401314

Gene position: 913103-912381 (Counterclockwise)

Preceding gene: 150401315

Following gene: 150401313

Centisome position: 58.18

GC content: 27.94

Gene sequence:

>723_bases
ATGGATAAACTACAAACTATTAGAAAAATAGTTCAGTCGGCATTTTTTATAAAATTTGTAATTTTATCGGTCTTTCTTTC
AAGCTTCTTTTGTCTGTGCATTTTTGGATACATTGAACAATTCATATTACTGGGAAGTATTTATTTCGTTCCAGTGGTGA
TAGTAATATCATTACTTACACTAATTTTTGGGAGACTATTCTGCGGTTGGATGTGTCCATTGGGTTTTATTTTTGATTTA
ACTTATAAATTGAGAGTTAAATTATCCAGGTTAAAAAAACTTCCCGAAGTTCCCAAAAATATCCATAATAAATTAATATA
TTTAAAGTATGTAATTTTAATATTATTCATCATATTGACATACTATTTGGCAACATATACTTATTGTTCGGTATGTCCTA
TCGGAGCTCTAACAAATTTATCTGGGACATTGCTTTCGTTTATTATCCTTATTGGAGTTATATTACTTGGATTTATATAT
CCAATGGCATTTTGCAGATATCTCTGTCCAATAGGGGCATTACTTGGGATATTTTCTATAAAACCATTATTTAAACTAAA
ATTAAATAATAAATGTGTTAATTGTAAATTATGCGAAAGAAAATGTCCAGTTCAGATAAATCTAACCAAAAACATAGACC
AAACGGAATGTATAAGATGTTTTGAATGTGTTTCAAGCTGTAAAAAAGATGCAATTGATTTTAAACCATTTTTTAAACGG
TAA

Upstream 100 bases:

>100_bases
TTAATATTGGAAGAAGCTAGGGCTAAAAGAATATATAAATCAAAGGAATTTAAATTTTACATTGACAATGATAAAATAGA
TGAATTTTTCAAGTGATATT

Downstream 100 bases:

>100_bases
ATAATAGATATAGATATAGTAATAATAATAATAATTATTACTTATAATAATATAATTTTTTCATAATATTCACCATATGC
TCCATGATAGTGGGGGAGCT

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MDKLQTIRKIVQSAFFIKFVILSVFLSSFFCLCIFGYIEQFILLGSIYFVPVVIVISLLTLIFGRLFCGWMCPLGFIFDL
TYKLRVKLSRLKKLPEVPKNIHNKLIYLKYVILILFIILTYYLATYTYCSVCPIGALTNLSGTLLSFIILIGVILLGFIY
PMAFCRYLCPIGALLGIFSIKPLFKLKLNNKCVNCKLCERKCPVQINLTKNIDQTECIRCFECVSSCKKDAIDFKPFFKR

Sequences:

>Translated_240_residues
MDKLQTIRKIVQSAFFIKFVILSVFLSSFFCLCIFGYIEQFILLGSIYFVPVVIVISLLTLIFGRLFCGWMCPLGFIFDL
TYKLRVKLSRLKKLPEVPKNIHNKLIYLKYVILILFIILTYYLATYTYCSVCPIGALTNLSGTLLSFIILIGVILLGFIY
PMAFCRYLCPIGALLGIFSIKPLFKLKLNNKCVNCKLCERKCPVQINLTKNIDQTECIRCFECVSSCKKDAIDFKPFFKR
>Mature_240_residues
MDKLQTIRKIVQSAFFIKFVILSVFLSSFFCLCIFGYIEQFILLGSIYFVPVVIVISLLTLIFGRLFCGWMCPLGFIFDL
TYKLRVKLSRLKKLPEVPKNIHNKLIYLKYVILILFIILTYYLATYTYCSVCPIGALTNLSGTLLSFIILIGVILLGFIY
PMAFCRYLCPIGALLGIFSIKPLFKLKLNNKCVNCKLCERKCPVQINLTKNIDQTECIRCFECVSSCKKDAIDFKPFFKR

Specific function: Unknown

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1787226, Length=198, Percent_Identity=28.2828282828283, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI1788532, Length=210, Percent_Identity=23.3333333333333, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27631; Mature: 27631

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
6.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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>Mature Secondary Structure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PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]