| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is cofD [H]
Identifier: 150401248
GI number: 150401248
Start: 848737
End: 849717
Strand: Reverse
Name: cofD [H]
Synonym: Maeo_0819
Alternate gene names: 150401248
Gene position: 849717-848737 (Counterclockwise)
Preceding gene: 150401249
Following gene: 150401247
Centisome position: 54.14
GC content: 29.36
Gene sequence:
>981_bases ATGAAGGTTTGTATTTTATCAGGAGGAACAGGAGCTCCCAAATTAATACAAGGATTAAAAGAAATTTTGCCAGAAGAAGA TATTTCTGTAATAGTAAATACTGGCGAAGATACTATGGTAGGTGATTTATATTTATCTCCTGATGTAGATACTGTATTAT ATACGCTATCCAATCAAATAAATGAGGACACCTGGTATGGTGTTAAGGGAGATACATTTATCGCCCATAATACAATTAAA GAGTTTGAAAATAAAGAAAACAATACATTTGGGGAAAATCTTAGAATAGGGGATAAAGATAGGGCTTTAAAGATGCATAA AACGCATTATATAAATAAAGGTTATCCATTATCTAAAATAATAAAAATGGAAAAAGAATTATTTGGAATAAAGGCAAATA TATTTCCAATGACCGATGATATCGTTAGAACCAAAATATTAATCAATGAAAACAATAATAAATATCTTATTGATTTTCAT GACTTTTGGATTAATAGAAGGGGAAATGCTACCGTAGTTGATATTTTTTATGAAAATTCTAATTATGCGGGAGCTCCAAG CAAAACGATAGAATGTATTAAAAATAGTGATATTATTATAATTGGTCCATCGAATCCCATAACTTCAATAGCTCCCATAT TAAGTATTAAAGATATTAAAGATACAATAATTGAAAGTAATAAACCAGTAGTTGCCGTATCTCCCATTATTGGAGAGGGT GCTGTCAGTGGTCCAGCTGGAATATTAATGAAGGCAAAAGGATATCCTGTAAGTGCAGAGGGCGTCTGTAAATTCTACAA TGATTTAGGTATTAATATAAATACCATGATTTTAGACAATATTGATAAAAATAAAGATTTTGAATTAAAAGTAAATAGCT GTGATTCCAATACTGCTGTGGCATATACAAATACAATAATGAAAACAATTGAAGATAAAATAAACCTTGCAAAATTTATA GTCAATCTTCGGACTATTTAA
Upstream 100 bases:
>100_bases TATTTATTTTAAAAATGCCGAAAAATTAAGTGAAATATGTAAAAAATATAACGGTAGAGAAAATATAAAAAATATTATAG ATAATAGATAAGGGGTTATT
Downstream 100 bases:
>100_bases GGTGGATAAAGGACAGTTATTGAAGATTAACTATATTTTAGGGCATGCATGATATTTCACCGTTTGTTTATATAATATAT CTAAGACGATATGCTTAAAT
Product: LPPG:FO 2-phospho-L-lactate transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MKVCILSGGTGAPKLIQGLKEILPEEDISVIVNTGEDTMVGDLYLSPDVDTVLYTLSNQINEDTWYGVKGDTFIAHNTIK EFENKENNTFGENLRIGDKDRALKMHKTHYINKGYPLSKIIKMEKELFGIKANIFPMTDDIVRTKILINENNNKYLIDFH DFWINRRGNATVVDIFYENSNYAGAPSKTIECIKNSDIIIIGPSNPITSIAPILSIKDIKDTIIESNKPVVAVSPIIGEG AVSGPAGILMKAKGYPVSAEGVCKFYNDLGININTMILDNIDKNKDFELKVNSCDSNTAVAYTNTIMKTIEDKINLAKFI VNLRTI
Sequences:
>Translated_326_residues MKVCILSGGTGAPKLIQGLKEILPEEDISVIVNTGEDTMVGDLYLSPDVDTVLYTLSNQINEDTWYGVKGDTFIAHNTIK EFENKENNTFGENLRIGDKDRALKMHKTHYINKGYPLSKIIKMEKELFGIKANIFPMTDDIVRTKILINENNNKYLIDFH DFWINRRGNATVVDIFYENSNYAGAPSKTIECIKNSDIIIIGPSNPITSIAPILSIKDIKDTIIESNKPVVAVSPIIGEG AVSGPAGILMKAKGYPVSAEGVCKFYNDLGININTMILDNIDKNKDFELKVNSCDSNTAVAYTNTIMKTIEDKINLAKFI VNLRTI >Mature_326_residues MKVCILSGGTGAPKLIQGLKEILPEEDISVIVNTGEDTMVGDLYLSPDVDTVLYTLSNQINEDTWYGVKGDTFIAHNTIK EFENKENNTFGENLRIGDKDRALKMHKTHYINKGYPLSKIIKMEKELFGIKANIFPMTDDIVRTKILINENNNKYLIDFH DFWINRRGNATVVDIFYENSNYAGAPSKTIECIKNSDIIIIGPSNPITSIAPILSIKDIKDTIIESNKPVVAVSPIIGEG AVSGPAGILMKAKGYPVSAEGVCKFYNDLGININTMILDNIDKNKDFELKVNSCDSNTAVAYTNTIMKTIEDKINLAKFI VNLRTI
Specific function: Catalyzes the transfer of the 2-phospholactate moiety from lactyl (2) diphospho-(5')guanosine (LPPG) to 7,8-didemethyl- 8-hydroxy-5-deazariboflavin (FO) with the formation of the L- lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5- deazariboflavin (F42
COG id: COG0391
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CofD family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002882 - InterPro: IPR010115 [H]
Pfam domain/function: PF01933 UPF0052 [H]
EC number: NA
Molecular weight: Translated: 36203; Mature: 36203
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVCILSGGTGAPKLIQGLKEILPEEDISVIVNTGEDTMVGDLYLSPDVDTVLYTLSNQI CEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEECCCHHHHHHHHHCCC NEDTWYGVKGDTFIAHNTIKEFENKENNTFGENLRIGDKDRALKMHKTHYINKGYPLSKI CCCEEECCCCCEEEEHHHHHHHHCCCCCCCCCCCEECCCHHEEEEHHHEECCCCCCHHHH IKMEKELFGIKANIFPMTDDIVRTKILINENNNKYLIDFHDFWINRRGNATVVDIFYENS HHHHHHHHCEEEEEECCCCCCEEEEEEEECCCCEEEEEEEHEEEECCCCEEEEEEEEECC NYAGAPSKTIECIKNSDIIIIGPSNPITSIAPILSIKDIKDTIIESNKPVVAVSPIIGEG CCCCCCHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC AVSGPAGILMKAKGYPVSAEGVCKFYNDLGININTMILDNIDKNKDFELKVNSCDSNTAV CCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEECCCCCCEE AYTNTIMKTIEDKINLAKFIVNLRTI EEHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKVCILSGGTGAPKLIQGLKEILPEEDISVIVNTGEDTMVGDLYLSPDVDTVLYTLSNQI CEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEECCCHHHHHHHHHCCC NEDTWYGVKGDTFIAHNTIKEFENKENNTFGENLRIGDKDRALKMHKTHYINKGYPLSKI CCCEEECCCCCEEEEHHHHHHHHCCCCCCCCCCCEECCCHHEEEEHHHEECCCCCCHHHH IKMEKELFGIKANIFPMTDDIVRTKILINENNNKYLIDFHDFWINRRGNATVVDIFYENS HHHHHHHHCEEEEEECCCCCCEEEEEEEECCCCEEEEEEEHEEEECCCCEEEEEEEEECC NYAGAPSKTIECIKNSDIIIIGPSNPITSIAPILSIKDIKDTIIESNKPVVAVSPIIGEG CCCCCCHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC AVSGPAGILMKAKGYPVSAEGVCKFYNDLGININTMILDNIDKNKDFELKVNSCDSNTAV CCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEECCCCCCEE AYTNTIMKTIEDKINLAKFIVNLRTI EEHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA