| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is bioA [H]
Identifier: 150401191
GI number: 150401191
Start: 783941
End: 785374
Strand: Direct
Name: bioA [H]
Synonym: Maeo_0762
Alternate gene names: 150401191
Gene position: 783941-785374 (Clockwise)
Preceding gene: 150401190
Following gene: 150401192
Centisome position: 49.95
GC content: 29.99
Gene sequence:
>1434_bases ATGAACAATAATTTAAATCCTAAAAAAATAATTGAAATGGATAAAAAATTTGTATGGCATCCATATACCCAAATGAAAGA ATACAACCAAAACCCCAATAATATAATAATTGAAAGAGGTGAAGGAAATTATTTAATAGATATACGAAATAAAAAATATC TTGATGCTGTTTCTTCTATTTGGTGTAATTTATTAGGACATAGTGAAAAAAGAATAATAAATGCAATTAAAGAACAGGCA GATAAAATATGCCATTCCACATTATTGGGTTGTGGAAATGTTCCATCAACAATATTGGCGGAAAAGGTAATTAATATTAC TCCCCCGCATTTGAAAAAAGTATTTTATTCAGAAGATGGGTCGGAAGCTGTTGAAATAGCTGTAAAAATGGCTTTTGAAT ATTGTCAATTGAAAGATAGTAAAAATAATAAAGATAATAATAACAATAACCAAACAGCACAACCTCAAAGGACAAAATTT GTTTCTGTAAAAGAGGGATACCACGGGGACACAATTGGAACAATGAGTGTAGGGGGGAGCTCCACATTTCACGGTATGTT TAAACCGTTGTTGTTTAATGGATATTTTGCAAATACTCCTTATTGTTATAGATGCCAATATCATAATTTTAAAGATACAG ACGATAGAAACAAATGCGGTTGTGAAATGGACTGTTTAAAGGAAATGTTAAATTTAATAGAATCCCACAAAGAAGAACTA TTTTGCGTAATTCTTGAAGCTGGAGTTATGGGCTCAGCAGGTATAATTCCATATCCAGATGGATATATCGAAAAAGTTGC AGAGCTCTGCAAAAAACACAATATTATATTAATATTAGATGAAGTTGCCACATATGGGAGACTTGGAAAATATTTATTTT CAGACAATGAAACCCTTAAAAAATTAAATAAACCAGATATAATATGTATAGGAAAAGGAATAACTGGCGGTTATTTACCA TTAGCTTTAACAATTACAACGGAAGAAATATATAATGAATTTTTAGGGGATTTTAAAGACTGTGTGCAATTTTTCCACGG GCATACCTATACAGGAAATCAACTATTATGCGCCTCTGCAATTGCTACCCTTGATGTATTGGAAGATGACAAAATATTTG AAAATACAAAGGATAAAATAAAATACCTCCATAATTCAATGGACAAATTAAAAGAACTGAATAATGTTGGAGATATTAGG AAAAAAGGATTTATGATAGGTATAGAACTTGTAAAAGACAAAGAAACAAAAGAGCCATTCCCATATGAATTTAAAGCAGG ATATAAAGTCGCAGATAAATTACTTGAAAAAGGAATATATATGAGACCAATATTTAACACAATTATAATAGTCCCCCCTT TAACCATAACCGCCGAAGAAATATCATTTTTGGTTGATGGATTATATAATTCAATTAAAGAAATTTTTGAATAA
Upstream 100 bases:
>100_bases GACCATATATTATTTGTTGGGATTTGGAATAAACAATAAATTTTAAGCAAATGTTCGCCGATTTACCCCCCCTATTTTTT TAAATATTTTTGGTGATATA
Downstream 100 bases:
>100_bases TATTTTTTTATTCATATCTTAACATACCATAATTATAAATAACAATTTAATACCATAAAATATTATGAAAGAATTATATC GACAGCTAATTCATTTAATA
Product: aminotransferase class-III
Products: NA
Alternate protein names: 7,8-diamino-pelargonic acid aminotransferase; DAPA AT; DAPA aminotransferase; Diaminopelargonic acid synthase [H]
Number of amino acids: Translated: 477; Mature: 477
Protein sequence:
>477_residues MNNNLNPKKIIEMDKKFVWHPYTQMKEYNQNPNNIIIERGEGNYLIDIRNKKYLDAVSSIWCNLLGHSEKRIINAIKEQA DKICHSTLLGCGNVPSTILAEKVINITPPHLKKVFYSEDGSEAVEIAVKMAFEYCQLKDSKNNKDNNNNNQTAQPQRTKF VSVKEGYHGDTIGTMSVGGSSTFHGMFKPLLFNGYFANTPYCYRCQYHNFKDTDDRNKCGCEMDCLKEMLNLIESHKEEL FCVILEAGVMGSAGIIPYPDGYIEKVAELCKKHNIILILDEVATYGRLGKYLFSDNETLKKLNKPDIICIGKGITGGYLP LALTITTEEIYNEFLGDFKDCVQFFHGHTYTGNQLLCASAIATLDVLEDDKIFENTKDKIKYLHNSMDKLKELNNVGDIR KKGFMIGIELVKDKETKEPFPYEFKAGYKVADKLLEKGIYMRPIFNTIIIVPPLTITAEEISFLVDGLYNSIKEIFE
Sequences:
>Translated_477_residues MNNNLNPKKIIEMDKKFVWHPYTQMKEYNQNPNNIIIERGEGNYLIDIRNKKYLDAVSSIWCNLLGHSEKRIINAIKEQA DKICHSTLLGCGNVPSTILAEKVINITPPHLKKVFYSEDGSEAVEIAVKMAFEYCQLKDSKNNKDNNNNNQTAQPQRTKF VSVKEGYHGDTIGTMSVGGSSTFHGMFKPLLFNGYFANTPYCYRCQYHNFKDTDDRNKCGCEMDCLKEMLNLIESHKEEL FCVILEAGVMGSAGIIPYPDGYIEKVAELCKKHNIILILDEVATYGRLGKYLFSDNETLKKLNKPDIICIGKGITGGYLP LALTITTEEIYNEFLGDFKDCVQFFHGHTYTGNQLLCASAIATLDVLEDDKIFENTKDKIKYLHNSMDKLKELNNVGDIR KKGFMIGIELVKDKETKEPFPYEFKAGYKVADKLLEKGIYMRPIFNTIIIVPPLTITAEEISFLVDGLYNSIKEIFE >Mature_477_residues MNNNLNPKKIIEMDKKFVWHPYTQMKEYNQNPNNIIIERGEGNYLIDIRNKKYLDAVSSIWCNLLGHSEKRIINAIKEQA DKICHSTLLGCGNVPSTILAEKVINITPPHLKKVFYSEDGSEAVEIAVKMAFEYCQLKDSKNNKDNNNNNQTAQPQRTKF VSVKEGYHGDTIGTMSVGGSSTFHGMFKPLLFNGYFANTPYCYRCQYHNFKDTDDRNKCGCEMDCLKEMLNLIESHKEEL FCVILEAGVMGSAGIIPYPDGYIEKVAELCKKHNIILILDEVATYGRLGKYLFSDNETLKKLNKPDIICIGKGITGGYLP LALTITTEEIYNEFLGDFKDCVQFFHGHTYTGNQLLCASAIATLDVLEDDKIFENTKDKIKYLHNSMDKLKELNNVGDIR KKGFMIGIELVKDKETKEPFPYEFKAGYKVADKLLEKGIYMRPIFNTIIIVPPLTITAEEISFLVDGLYNSIKEIFE
Specific function: Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor [H]
COG id: COG0161
COG function: function code H; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily [H]
Homologues:
Organism=Homo sapiens, GI13994255, Length=500, Percent_Identity=28, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI4557809, Length=438, Percent_Identity=28.0821917808219, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI37574042, Length=439, Percent_Identity=26.4236902050114, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI226442705, Length=439, Percent_Identity=26.1958997722096, Blast_Score=122, Evalue=7e-28, Organism=Homo sapiens, GI226442709, Length=409, Percent_Identity=26.4058679706601, Blast_Score=117, Evalue=3e-26, Organism=Homo sapiens, GI24119277, Length=463, Percent_Identity=23.110151187905, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI284507298, Length=216, Percent_Identity=32.8703703703704, Blast_Score=100, Evalue=4e-21, Organism=Escherichia coli, GI1786991, Length=466, Percent_Identity=29.1845493562232, Blast_Score=204, Evalue=9e-54, Organism=Escherichia coli, GI145693181, Length=447, Percent_Identity=26.8456375838926, Blast_Score=162, Evalue=4e-41, Organism=Escherichia coli, GI1788044, Length=447, Percent_Identity=26.6219239373602, Blast_Score=133, Evalue=2e-32, Organism=Escherichia coli, GI1789759, Length=381, Percent_Identity=27.0341207349081, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1789016, Length=436, Percent_Identity=24.5412844036697, Blast_Score=113, Evalue=3e-26, Organism=Escherichia coli, GI1787560, Length=431, Percent_Identity=24.5939675174014, Blast_Score=94, Evalue=1e-20, Organism=Caenorhabditis elegans, GI32564660, Length=467, Percent_Identity=28.9079229122056, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI25144271, Length=479, Percent_Identity=26.5135699373695, Blast_Score=132, Evalue=3e-31, Organism=Caenorhabditis elegans, GI71992977, Length=401, Percent_Identity=27.1820448877805, Blast_Score=130, Evalue=1e-30, Organism=Caenorhabditis elegans, GI25144274, Length=231, Percent_Identity=31.1688311688312, Blast_Score=100, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6324386, Length=491, Percent_Identity=28.1059063136456, Blast_Score=176, Evalue=6e-45, Organism=Saccharomyces cerevisiae, GI6323470, Length=478, Percent_Identity=26.3598326359833, Blast_Score=137, Evalue=4e-33, Organism=Saccharomyces cerevisiae, GI6324432, Length=464, Percent_Identity=26.2931034482759, Blast_Score=123, Evalue=8e-29, Organism=Drosophila melanogaster, GI28574759, Length=469, Percent_Identity=28.3582089552239, Blast_Score=149, Evalue=5e-36, Organism=Drosophila melanogaster, GI161085790, Length=464, Percent_Identity=27.5862068965517, Blast_Score=148, Evalue=7e-36, Organism=Drosophila melanogaster, GI21357415, Length=449, Percent_Identity=26.0579064587973, Blast_Score=129, Evalue=4e-30, Organism=Drosophila melanogaster, GI21356575, Length=473, Percent_Identity=23.4672304439746, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI281366494, Length=395, Percent_Identity=24.3037974683544, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI24667139, Length=395, Percent_Identity=24.3037974683544, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI24667143, Length=395, Percent_Identity=24.3037974683544, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005814 - InterPro: IPR005815 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00202 Aminotran_3 [H]
EC number: =2.6.1.62 [H]
Molecular weight: Translated: 54281; Mature: 54281
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNNLNPKKIIEMDKKFVWHPYTQMKEYNQNPNNIIIERGEGNYLIDIRNKKYLDAVSSI CCCCCCHHHHHHHHHHHEECCHHHHHHHCCCCCEEEEECCCCCEEEEECCCHHHHHHHHH WCNLLGHSEKRIINAIKEQADKICHSTLLGCGNVPSTILAEKVINITPPHLKKVFYSEDG HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCC SEAVEIAVKMAFEYCQLKDSKNNKDNNNNNQTAQPQRTKFVSVKEGYHGDTIGTMSVGGS HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEEEEECCCCCCCCCEEEECCCC STFHGMFKPLLFNGYFANTPYCYRCQYHNFKDTDDRNKCGCEMDCLKEMLNLIESHKEEL CHHHHHHHHHHHCCEECCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHE FCVILEAGVMGSAGIIPYPDGYIEKVAELCKKHNIILILDEVATYGRLGKYLFSDNETLK EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHCCCHHHH KLNKPDIICIGKGITGGYLPLALTITTEEIYNEFLGDFKDCVQFFHGHTYTGNQLLCASA HCCCCCEEEEECCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH IATLDVLEDDKIFENTKDKIKYLHNSMDKLKELNNVGDIRKKGFMIGIELVKDKETKEPF HHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCC PYEFKAGYKVADKLLEKGIYMRPIFNTIIIVPPLTITAEEISFLVDGLYNSIKEIFE CCCCCCCHHHHHHHHHCCCEEEEHHCEEEEECCCEEEHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MNNNLNPKKIIEMDKKFVWHPYTQMKEYNQNPNNIIIERGEGNYLIDIRNKKYLDAVSSI CCCCCCHHHHHHHHHHHEECCHHHHHHHCCCCCEEEEECCCCCEEEEECCCHHHHHHHHH WCNLLGHSEKRIINAIKEQADKICHSTLLGCGNVPSTILAEKVINITPPHLKKVFYSEDG HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCC SEAVEIAVKMAFEYCQLKDSKNNKDNNNNNQTAQPQRTKFVSVKEGYHGDTIGTMSVGGS HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEEEEECCCCCCCCCEEEECCCC STFHGMFKPLLFNGYFANTPYCYRCQYHNFKDTDDRNKCGCEMDCLKEMLNLIESHKEEL CHHHHHHHHHHHCCEECCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHE FCVILEAGVMGSAGIIPYPDGYIEKVAELCKKHNIILILDEVATYGRLGKYLFSDNETLK EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHCCCHHHH KLNKPDIICIGKGITGGYLPLALTITTEEIYNEFLGDFKDCVQFFHGHTYTGNQLLCASA HCCCCCEEEEECCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH IATLDVLEDDKIFENTKDKIKYLHNSMDKLKELNNVGDIRKKGFMIGIELVKDKETKEPF HHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCC PYEFKAGYKVADKLLEKGIYMRPIFNTIIIVPPLTITAEEISFLVDGLYNSIKEIFE CCCCCCCHHHHHHHHHCCCEEEEHHCEEEEECCCEEEHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]