Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is selD [H]

Identifier: 150401153

GI number: 150401153

Start: 743457

End: 744503

Strand: Reverse

Name: selD [H]

Synonym: Maeo_0724

Alternate gene names: 150401153

Gene position: 744503-743457 (Counterclockwise)

Preceding gene: 150401155

Following gene: 150401152

Centisome position: 47.44

GC content: 36.68

Gene sequence:

>1047_bases
ATTAAATCAAAAGATATAAAATTAACTCAAATGGTGGAGCTCCATGGATGAGCTTGCAAACTTCCCAACACAGAATTAGA
GGCACTGGTAAAAGACATTATATCAAAAGAAGATTTAGAAAAAACCCTCGTTGGATTAGGTGATGATGCCGCCGTAATTA
TTAGAAACAACCTTGCAATAGTAAAAACCGTAGATGTTTTTACTCCCATTGTAGATGACCCATATACACAGGGCAAAATA
GCAGCATGCAACTCTATAAGCGATGTTTATGCTATGGGCGTATTGGATATAATTGGTGTATTGGTAATAATGGGAATTCC
TCAAAATCTTCCGATAGAATGTGCAAAAGAAATGTTAAAAGGATTTCAGGACTTTTGTAGGGCTGATGATACAACAATAA
TCGGCGGACATACCATATTAAACCCTGCTCCGATAATTGGGGGCTCTGTTAGTGGCGTAGGTAGAAAAGAGGATATACTT
ACAAAAGGAGGGGCGAAAGAAGGAGATATATTAATATTGACAAAACCATTGGGCACACAGTCGGCTATGGCACTATCTCG
AGTAGGGGAAGAATATGAAGACCTATTGGAAATAACTGCAAAAGAAAAGGAAAGAATAATTGATAAGGCTATTGAATTAA
TGACTACTTCAAATCGGGGGGCACTAATGGCACTGCGAGAATTGGAGCGGGAAAATAATGAAAAGATAGCAAATGCAATG
ACGGATATTACGGGTTTTGGAATATTGGGACATAGTCAAGAAATGGCTGAACAAAGTGATGTCGATATAGAGATAAATCT
TCTTCCGATTATTAAAAAAACCGACTATCTGTCTTCATCGTTTGGACATCAATTATTAAAAGGATATGGTGCCGAAACCG
CGGGTGGATTGTTTATATCTGTAAATCCGAATTATGCCGATAAATTGGTTGAAAAACTACGAATAAGCGGAAATTATGCC
TATATGGTAGGAAAAGTTTTAAAATCTAAATCTGATGTTGGGAAGGCACATTTAAGTGATAACTTAAAGATTTTAGAGAT
ATCGTAA

Upstream 100 bases:

>100_bases
AATTAAAAATACTTATAAATTATATATTATAATTGTGAAGAATTATATATATATAACTAACATAAATAATATTTATATTA
AATATTAATTTGGTGATAAT

Downstream 100 bases:

>100_bases
AAATTTGCTTTGCAAATTTTAAGATATATATTTGGCAATTTTATAGGTATTCCGAACCTTTTTAGGAGGAATACTTTTAT
TTTTTTATTTTTATTTTATT

Product: selenophosphate synthetase

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MKSKDIKLTQMVELHGUACKLPNTELEALVKDIISKEDLEKTLVGLGDDAAVIIRNNLAIVKTVDVFTPIVDDPYTQGKI
AACNSISDVYAMGVLDIIGVLVIMGIPQNLPIECAKEMLKGFQDFCRADDTTIIGGHTILNPAPIIGGSVSGVGRKEDIL
TKGGAKEGDILILTKPLGTQSAMALSRVGEEYEDLLEITAKEKERIIDKAIELMTTSNRGALMALRELERENNEKIANAM
TDITGFGILGHSQEMAEQSDVDIEINLLPIIKKTDYLSSSFGHQLLKGYGAETAGGLFISVNPNYADKLVEKLRISGNYA
YMVGKVLKSKSDVGKAHLSDNLKILEIS

Sequences:

>Translated_348_residues
MKSKDIKLTQMVELHG*ACKLPNTELEALVKDIISKEDLEKTLVGLGDDAAVIIRNNLAIVKTVDVFTPIVDDPYTQGKI
AACNSISDVYAMGVLDIIGVLVIMGIPQNLPIECAKEMLKGFQDFCRADDTTIIGGHTILNPAPIIGGSVSGVGRKEDIL
TKGGAKEGDILILTKPLGTQSAMALSRVGEEYEDLLEITAKEKERIIDKAIELMTTSNRGALMALRELERENNEKIANAM
TDITGFGILGHSQEMAEQSDVDIEINLLPIIKKTDYLSSSFGHQLLKGYGAETAGGLFISVNPNYADKLVEKLRISGNYA
YMVGKVLKSKSDVGKAHLSDNLKILEIS
>Mature_348_residues
MKSKDIKLTQMVELHG*ACKLPNTELEALVKDIISKEDLEKTLVGLGDDAAVIIRNNLAIVKTVDVFTPIVDDPYTQGKI
AACNSISDVYAMGVLDIIGVLVIMGIPQNLPIECAKEMLKGFQDFCRADDTTIIGGHTILNPAPIIGGSVSGVGRKEDIL
TKGGAKEGDILILTKPLGTQSAMALSRVGEEYEDLLEITAKEKERIIDKAIELMTTSNRGALMALRELERENNEKIANAM
TDITGFGILGHSQEMAEQSDVDIEINLLPIIKKTDYLSSSFGHQLLKGYGAETAGGLFISVNPNYADKLVEKLRISGNYA
YMVGKVLKSKSDVGKAHLSDNLKILEIS

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797148, Length=372, Percent_Identity=33.6021505376344, Blast_Score=171, Evalue=7e-43,
Organism=Homo sapiens, GI15011844, Length=321, Percent_Identity=35.5140186915888, Blast_Score=168, Evalue=7e-42,
Organism=Escherichia coli, GI1788062, Length=338, Percent_Identity=34.6153846153846, Blast_Score=127, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI17543426, Length=363, Percent_Identity=31.6804407713499, Blast_Score=149, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24653602, Length=368, Percent_Identity=33.1521739130435, Blast_Score=173, Evalue=2e-43,
Organism=Drosophila melanogaster, GI24653604, Length=368, Percent_Identity=33.1521739130435, Blast_Score=173, Evalue=2e-43,
Organism=Drosophila melanogaster, GI28574119, Length=370, Percent_Identity=32.4324324324324, Blast_Score=155, Evalue=3e-38,
Organism=Drosophila melanogaster, GI28574118, Length=272, Percent_Identity=34.1911764705882, Blast_Score=129, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 37528; Mature: 37528

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKDIKLTQMVELHGACKLPNTELEALVKDIISKEDLEKTLVGLGDDAAVIIRNNLAIV
CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCEEEEECCEEEE
KTVDVFTPIVDDPYTQGKIAACNSISDVYAMGVLDIIGVLVIMGIPQNLPIECAKEMLKG
EEHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
FQDFCRADDTTIIGGHTILNPAPIIGGSVSGVGRKEDILTKGGAKEGDILILTKPLGTQS
HHHHHCCCCCEEECCCEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCHH
AMALSRVGEEYEDLLEITAKEKERIIDKAIELMTTSNRGALMALRELERENNEKIANAMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHH
DITGFGILGHSQEMAEQSDVDIEINLLPIIKKTDYLSSSFGHQLLKGYGAETAGGLFISV
HHHHCCEECCCHHHHHHCCCCEEEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEE
NPNYADKLVEKLRISGNYAYMVGKVLKSKSDVGKAHLSDNLKILEIS
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHCCCEEEEEEC
>Mature Secondary Structure
MKSKDIKLTQMVELHGACKLPNTELEALVKDIISKEDLEKTLVGLGDDAAVIIRNNLAIV
CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCEEEEECCEEEE
KTVDVFTPIVDDPYTQGKIAACNSISDVYAMGVLDIIGVLVIMGIPQNLPIECAKEMLKG
EEHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
FQDFCRADDTTIIGGHTILNPAPIIGGSVSGVGRKEDILTKGGAKEGDILILTKPLGTQS
HHHHHCCCCCEEECCCEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCHH
AMALSRVGEEYEDLLEITAKEKERIIDKAIELMTTSNRGALMALRELERENNEKIANAMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHH
DITGFGILGHSQEMAEQSDVDIEINLLPIIKKTDYLSSSFGHQLLKGYGAETAGGLFISV
HHHHCCEECCCHHHHHHCCCCEEEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEE
NPNYADKLVEKLRISGNYAYMVGKVLKSKSDVGKAHLSDNLKILEIS
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA