| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is selD [H]
Identifier: 150401153
GI number: 150401153
Start: 743457
End: 744503
Strand: Reverse
Name: selD [H]
Synonym: Maeo_0724
Alternate gene names: 150401153
Gene position: 744503-743457 (Counterclockwise)
Preceding gene: 150401155
Following gene: 150401152
Centisome position: 47.44
GC content: 36.68
Gene sequence:
>1047_bases ATTAAATCAAAAGATATAAAATTAACTCAAATGGTGGAGCTCCATGGATGAGCTTGCAAACTTCCCAACACAGAATTAGA GGCACTGGTAAAAGACATTATATCAAAAGAAGATTTAGAAAAAACCCTCGTTGGATTAGGTGATGATGCCGCCGTAATTA TTAGAAACAACCTTGCAATAGTAAAAACCGTAGATGTTTTTACTCCCATTGTAGATGACCCATATACACAGGGCAAAATA GCAGCATGCAACTCTATAAGCGATGTTTATGCTATGGGCGTATTGGATATAATTGGTGTATTGGTAATAATGGGAATTCC TCAAAATCTTCCGATAGAATGTGCAAAAGAAATGTTAAAAGGATTTCAGGACTTTTGTAGGGCTGATGATACAACAATAA TCGGCGGACATACCATATTAAACCCTGCTCCGATAATTGGGGGCTCTGTTAGTGGCGTAGGTAGAAAAGAGGATATACTT ACAAAAGGAGGGGCGAAAGAAGGAGATATATTAATATTGACAAAACCATTGGGCACACAGTCGGCTATGGCACTATCTCG AGTAGGGGAAGAATATGAAGACCTATTGGAAATAACTGCAAAAGAAAAGGAAAGAATAATTGATAAGGCTATTGAATTAA TGACTACTTCAAATCGGGGGGCACTAATGGCACTGCGAGAATTGGAGCGGGAAAATAATGAAAAGATAGCAAATGCAATG ACGGATATTACGGGTTTTGGAATATTGGGACATAGTCAAGAAATGGCTGAACAAAGTGATGTCGATATAGAGATAAATCT TCTTCCGATTATTAAAAAAACCGACTATCTGTCTTCATCGTTTGGACATCAATTATTAAAAGGATATGGTGCCGAAACCG CGGGTGGATTGTTTATATCTGTAAATCCGAATTATGCCGATAAATTGGTTGAAAAACTACGAATAAGCGGAAATTATGCC TATATGGTAGGAAAAGTTTTAAAATCTAAATCTGATGTTGGGAAGGCACATTTAAGTGATAACTTAAAGATTTTAGAGAT ATCGTAA
Upstream 100 bases:
>100_bases AATTAAAAATACTTATAAATTATATATTATAATTGTGAAGAATTATATATATATAACTAACATAAATAATATTTATATTA AATATTAATTTGGTGATAAT
Downstream 100 bases:
>100_bases AAATTTGCTTTGCAAATTTTAAGATATATATTTGGCAATTTTATAGGTATTCCGAACCTTTTTAGGAGGAATACTTTTAT TTTTTTATTTTTATTTTATT
Product: selenophosphate synthetase
Products: NA
Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MKSKDIKLTQMVELHGUACKLPNTELEALVKDIISKEDLEKTLVGLGDDAAVIIRNNLAIVKTVDVFTPIVDDPYTQGKI AACNSISDVYAMGVLDIIGVLVIMGIPQNLPIECAKEMLKGFQDFCRADDTTIIGGHTILNPAPIIGGSVSGVGRKEDIL TKGGAKEGDILILTKPLGTQSAMALSRVGEEYEDLLEITAKEKERIIDKAIELMTTSNRGALMALRELERENNEKIANAM TDITGFGILGHSQEMAEQSDVDIEINLLPIIKKTDYLSSSFGHQLLKGYGAETAGGLFISVNPNYADKLVEKLRISGNYA YMVGKVLKSKSDVGKAHLSDNLKILEIS
Sequences:
>Translated_348_residues MKSKDIKLTQMVELHG*ACKLPNTELEALVKDIISKEDLEKTLVGLGDDAAVIIRNNLAIVKTVDVFTPIVDDPYTQGKI AACNSISDVYAMGVLDIIGVLVIMGIPQNLPIECAKEMLKGFQDFCRADDTTIIGGHTILNPAPIIGGSVSGVGRKEDIL TKGGAKEGDILILTKPLGTQSAMALSRVGEEYEDLLEITAKEKERIIDKAIELMTTSNRGALMALRELERENNEKIANAM TDITGFGILGHSQEMAEQSDVDIEINLLPIIKKTDYLSSSFGHQLLKGYGAETAGGLFISVNPNYADKLVEKLRISGNYA YMVGKVLKSKSDVGKAHLSDNLKILEIS >Mature_348_residues MKSKDIKLTQMVELHG*ACKLPNTELEALVKDIISKEDLEKTLVGLGDDAAVIIRNNLAIVKTVDVFTPIVDDPYTQGKI AACNSISDVYAMGVLDIIGVLVIMGIPQNLPIECAKEMLKGFQDFCRADDTTIIGGHTILNPAPIIGGSVSGVGRKEDIL TKGGAKEGDILILTKPLGTQSAMALSRVGEEYEDLLEITAKEKERIIDKAIELMTTSNRGALMALRELERENNEKIANAM TDITGFGILGHSQEMAEQSDVDIEINLLPIIKKTDYLSSSFGHQLLKGYGAETAGGLFISVNPNYADKLVEKLRISGNYA YMVGKVLKSKSDVGKAHLSDNLKILEIS
Specific function: Synthesizes selenophosphate from selenide and ATP [H]
COG id: COG0709
COG function: function code E; Selenophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]
Homologues:
Organism=Homo sapiens, GI24797148, Length=372, Percent_Identity=33.6021505376344, Blast_Score=171, Evalue=7e-43, Organism=Homo sapiens, GI15011844, Length=321, Percent_Identity=35.5140186915888, Blast_Score=168, Evalue=7e-42, Organism=Escherichia coli, GI1788062, Length=338, Percent_Identity=34.6153846153846, Blast_Score=127, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17543426, Length=363, Percent_Identity=31.6804407713499, Blast_Score=149, Evalue=2e-36, Organism=Drosophila melanogaster, GI24653602, Length=368, Percent_Identity=33.1521739130435, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI24653604, Length=368, Percent_Identity=33.1521739130435, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI28574119, Length=370, Percent_Identity=32.4324324324324, Blast_Score=155, Evalue=3e-38, Organism=Drosophila melanogaster, GI28574118, Length=272, Percent_Identity=34.1911764705882, Blast_Score=129, Evalue=3e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR004536 - InterPro: IPR023061 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =2.7.9.3 [H]
Molecular weight: Translated: 37528; Mature: 37528
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKDIKLTQMVELHGACKLPNTELEALVKDIISKEDLEKTLVGLGDDAAVIIRNNLAIV CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCEEEEECCEEEE KTVDVFTPIVDDPYTQGKIAACNSISDVYAMGVLDIIGVLVIMGIPQNLPIECAKEMLKG EEHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH FQDFCRADDTTIIGGHTILNPAPIIGGSVSGVGRKEDILTKGGAKEGDILILTKPLGTQS HHHHHCCCCCEEECCCEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCHH AMALSRVGEEYEDLLEITAKEKERIIDKAIELMTTSNRGALMALRELERENNEKIANAMT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHH DITGFGILGHSQEMAEQSDVDIEINLLPIIKKTDYLSSSFGHQLLKGYGAETAGGLFISV HHHHCCEECCCHHHHHHCCCCEEEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEE NPNYADKLVEKLRISGNYAYMVGKVLKSKSDVGKAHLSDNLKILEIS CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHCCCEEEEEEC >Mature Secondary Structure MKSKDIKLTQMVELHGACKLPNTELEALVKDIISKEDLEKTLVGLGDDAAVIIRNNLAIV CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCEEEEECCEEEE KTVDVFTPIVDDPYTQGKIAACNSISDVYAMGVLDIIGVLVIMGIPQNLPIECAKEMLKG EEHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH FQDFCRADDTTIIGGHTILNPAPIIGGSVSGVGRKEDILTKGGAKEGDILILTKPLGTQS HHHHHCCCCCEEECCCEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEECCCCCHH AMALSRVGEEYEDLLEITAKEKERIIDKAIELMTTSNRGALMALRELERENNEKIANAMT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHH DITGFGILGHSQEMAEQSDVDIEINLLPIIKKTDYLSSSFGHQLLKGYGAETAGGLFISV HHHHCCEECCCHHHHHHCCCCEEEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEE NPNYADKLVEKLRISGNYAYMVGKVLKSKSDVGKAHLSDNLKILEIS CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA