| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is sppA [C]
Identifier: 150401144
GI number: 150401144
Start: 734089
End: 734961
Strand: Direct
Name: sppA [C]
Synonym: Maeo_0715
Alternate gene names: 150401144
Gene position: 734089-734961 (Clockwise)
Preceding gene: 150401143
Following gene: 150401145
Centisome position: 46.77
GC content: 34.14
Gene sequence:
>873_bases ATGGCCATATTATTCATGCCAGATGGTAGCGGAAATAATATATTTTCATTTTGGAGTGATGAAGTTTCAATTATAGAATT AACTGGCGAAATTAGTTCCAATGGTGGAGATGGGGGAGTATTTGGAGGATATTCTCCAAGTGCTGATGAATATATTAGAT TATTAGATAATGCTGAAAATAACGATGGCGTAAAAGCAGTTGTATTAAAAATTAATTCTCCAGGAGGAGAAGTGGTGGCA AGTGAAAAACTTGCAAGAAAAGTAAAAGAAGTTTCTGAAAAAAAGCCCGTTGTGGCATATATTGAAACTATTGGGGCTTC TGGTGCATATATGGCAGCAGTGCCTTCCGATTATATTGTAGCCGAAAAACATTCAATGGTTGGAAGTATTGGGGTAATAA TGGGACTATCTCATTATTATGAGCTTTATGAAAAAATTGGAATAAATACTACCACAATAAAAGCAGGAAAATATAAAGAT ATCGGCTCACCAAATCGACCAATGACAGATGAAGAAAAAAAAATGTTAGAATCTATGACGGACGAAATGTATGGAGATTT TATAAAATGGGTTGCTGAAAATAGGGGAATGGACATAAATAAAACCTACGAAGTAGCAGAAGGTAAAATATATACGGGAA GCCAGGCTAAAAAAGCAGGATTAGTAGATGCCGTTGGTGTTGAACAGGATGCCATTGATAAAGCTTCTGAATTAGCAAAT ATATCCAATCCTACCGTAGTCTATTATGATGCAAATAAACCAGCTGGATTATTTGGTTTATCTATTAATGATATTGTATA TCATTTGGGTTATGGTATTGGCAGGGGTTTAAATCCAAACATAGAACAGAAAACTATTAAATTAAGTTATTAA
Upstream 100 bases:
>100_bases TATAATTTATGCGGGCGATATTTTGAAAAATAAAAATATATATTTAATATTTGGGGCCTTGGTAGCATTATTGATATTAT TATCTGTTGGGGCTCTAACA
Downstream 100 bases:
>100_bases TATTAATTATAAAATTATTTATTAAAATATATTTTCTATTTTTTATTATTTTATTGTCTTCTTTGTTTATTAATTATTAA TTTATCTAAATTTGGTGTAA
Product: signal peptide peptidase SppA, 36K type
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MAILFMPDGSGNNIFSFWSDEVSIIELTGEISSNGGDGGVFGGYSPSADEYIRLLDNAENNDGVKAVVLKINSPGGEVVA SEKLARKVKEVSEKKPVVAYIETIGASGAYMAAVPSDYIVAEKHSMVGSIGVIMGLSHYYELYEKIGINTTTIKAGKYKD IGSPNRPMTDEEKKMLESMTDEMYGDFIKWVAENRGMDINKTYEVAEGKIYTGSQAKKAGLVDAVGVEQDAIDKASELAN ISNPTVVYYDANKPAGLFGLSINDIVYHLGYGIGRGLNPNIEQKTIKLSY
Sequences:
>Translated_290_residues MAILFMPDGSGNNIFSFWSDEVSIIELTGEISSNGGDGGVFGGYSPSADEYIRLLDNAENNDGVKAVVLKINSPGGEVVA SEKLARKVKEVSEKKPVVAYIETIGASGAYMAAVPSDYIVAEKHSMVGSIGVIMGLSHYYELYEKIGINTTTIKAGKYKD IGSPNRPMTDEEKKMLESMTDEMYGDFIKWVAENRGMDINKTYEVAEGKIYTGSQAKKAGLVDAVGVEQDAIDKASELAN ISNPTVVYYDANKPAGLFGLSINDIVYHLGYGIGRGLNPNIEQKTIKLSY >Mature_289_residues AILFMPDGSGNNIFSFWSDEVSIIELTGEISSNGGDGGVFGGYSPSADEYIRLLDNAENNDGVKAVVLKINSPGGEVVAS EKLARKVKEVSEKKPVVAYIETIGASGAYMAAVPSDYIVAEKHSMVGSIGVIMGLSHYYELYEKIGINTTTIKAGKYKDI GSPNRPMTDEEKKMLESMTDEMYGDFIKWVAENRGMDINKTYEVAEGKIYTGSQAKKAGLVDAVGVEQDAIDKASELANI SNPTVVYYDANKPAGLFGLSINDIVYHLGYGIGRGLNPNIEQKTIKLSY
Specific function: Digestion Of The Cleaved Signal Peptides. This Activity Is Necessary To Maintain Proper Secretion Of Mature Proteins Across The Membrane. [C]
COG id: COG0616
COG function: function code OU; Periplasmic serine proteases (ClpP class)
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S49 family [H]
Homologues:
Organism=Escherichia coli, GI1788064, Length=231, Percent_Identity=31.6017316017316, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1787527, Length=170, Percent_Identity=30.5882352941176, Blast_Score=72, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004635 - InterPro: IPR002142 [H]
Pfam domain/function: PF01343 Peptidase_S49 [H]
EC number: 3.4.21.-
Molecular weight: Translated: 31330; Mature: 31199
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAILFMPDGSGNNIFSFWSDEVSIIELTGEISSNGGDGGVFGGYSPSADEYIRLLDNAEN CEEEEECCCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC NDGVKAVVLKINSPGGEVVASEKLARKVKEVSEKKPVVAYIETIGASGAYMAAVPSDYIV CCCEEEEEEEEECCCCCEEHHHHHHHHHHHHHHCCCEEEEEEHHCCCCEEEEECCCCEEE AEKHSMVGSIGVIMGLSHYYELYEKIGINTTTIKAGKYKDIGSPNRPMTDEEKKMLESMT ECHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH DEMYGDFIKWVAENRGMDINKTYEVAEGKIYTGSQAKKAGLVDAVGVEQDAIDKASELAN HHHHHHHHHHHHHCCCCCCCCEEEECCCEEEECCCCCCCCCEEECCCCHHHHHHHHHHHC ISNPTVVYYDANKPAGLFGLSINDIVYHLGYGIGRGLNPNIEQKTIKLSY CCCCEEEEEECCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCEEEECC >Mature Secondary Structure AILFMPDGSGNNIFSFWSDEVSIIELTGEISSNGGDGGVFGGYSPSADEYIRLLDNAEN EEEEECCCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC NDGVKAVVLKINSPGGEVVASEKLARKVKEVSEKKPVVAYIETIGASGAYMAAVPSDYIV CCCEEEEEEEEECCCCCEEHHHHHHHHHHHHHHCCCEEEEEEHHCCCCEEEEECCCCEEE AEKHSMVGSIGVIMGLSHYYELYEKIGINTTTIKAGKYKDIGSPNRPMTDEEKKMLESMT ECHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH DEMYGDFIKWVAENRGMDINKTYEVAEGKIYTGSQAKKAGLVDAVGVEQDAIDKASELAN HHHHHHHHHHHHHCCCCCCCCEEEECCCEEEECCCCCCCCCEEECCCCHHHHHHHHHHHC ISNPTVVYYDANKPAGLFGLSINDIVYHLGYGIGRGLNPNIEQKTIKLSY CCCCEEEEEECCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]