| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is yrbG [C]
Identifier: 150401145
GI number: 150401145
Start: 735065
End: 736057
Strand: Direct
Name: yrbG [C]
Synonym: Maeo_0716
Alternate gene names: 150401145
Gene position: 735065-736057 (Clockwise)
Preceding gene: 150401144
Following gene: 150401146
Centisome position: 46.83
GC content: 28.7
Gene sequence:
>993_bases ATGGTAGAAATTTTATTTAGTGTATTTATTCTATTATTGGGTTTGGCATTACTTAATTATGGTAGTGATTGGTTTGTAGT GGGGAGCTCCAAAGTAGCAAAACATTTAAATGTTTCAAATTTTGTAATTGGGGCAACAGTTGTTGCTTTTGGAACCTCAT TACCTGAAATAATAACAAGCGTTTATGCATCATATATTGGCTCCACAGGAATAGCCGTAGGAAACTCATTAGGTAGTAAT ATAGCCAATGTTGGATTAATATTGGGATTAAGTGCCCTAATTGCTCCAATATATATAAGAAAAGAAAATATTTTAAAAAA CGGATATATTTATTTATTATTTACAATCATAGCATTTATATTAGGCTATGATGGTTTTAATTCAATTGATGGTATATTAT TATTTATAATGCTAATTTCATACATAACATATACTATTAAAAAAGGAGGATGTTGCGAGGAAATGGGGGAAAATAATGGG AGCATAGTTAAATCAGTGTTATTTACTATTTTAGGACTATTGGCAGTTATAGTTGGAAGTAGCCTATTTGTAAGTGGTGC AAAAGATATTGCATTGTTTTTAGGCATATCTGATAAAATCATTGGATTTACCCTTGTTGCTTTTGGAACCTCATTACCTG AATTGGTGGTTTCAATTACCGCAGTTAAAAGAAAACTGGGAGATATGGTAATTGGAAATATTATTGGTAGTAATATAGCA AATATTGGCGGTGCATTGGCATTGGCTTCCATAATAAGCCCACTCCCAAAAGTTCCTTTTGAAATGACTGTAAATTTACT TTTAACCTCATTGATGGTATTATTTATGTCCAAACATATTCTGGAATTTATTAAGAAAAATAAGGATAAAATACATAACA AAAAAGATAATAACGATAATGAAACCATTTACTCAAAAATAAATAGAATTGATGGAACAATATTAATTTTAATTTATTTA GGATTTATATTATTTATTTCCAATATATTATAA
Upstream 100 bases:
>100_bases TAATTATAAAATTATTTATTAAAATATATTTTCTATTTTTTATTATTTTATTGTCTTCTTTGTTTATTAATTATTAATTT ATCTAAATTTGGTGTAAATT
Downstream 100 bases:
>100_bases ATAGATAGATATATAGATAAATAGATAAATAATAACACATCGTGATACAATGAAACAAATAAAATTAAAAATAAAATTAA ATGGAGTATTTAAAGAATAT
Product: CaCA family Na(+)/Ca(+) antiporter
Products: Na (I) [Cytoplasm]; Ca (II) [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MVEILFSVFILLLGLALLNYGSDWFVVGSSKVAKHLNVSNFVIGATVVAFGTSLPEIITSVYASYIGSTGIAVGNSLGSN IANVGLILGLSALIAPIYIRKENILKNGYIYLLFTIIAFILGYDGFNSIDGILLFIMLISYITYTIKKGGCCEEMGENNG SIVKSVLFTILGLLAVIVGSSLFVSGAKDIALFLGISDKIIGFTLVAFGTSLPELVVSITAVKRKLGDMVIGNIIGSNIA NIGGALALASIISPLPKVPFEMTVNLLLTSLMVLFMSKHILEFIKKNKDKIHNKKDNNDNETIYSKINRIDGTILILIYL GFILFISNIL
Sequences:
>Translated_330_residues MVEILFSVFILLLGLALLNYGSDWFVVGSSKVAKHLNVSNFVIGATVVAFGTSLPEIITSVYASYIGSTGIAVGNSLGSN IANVGLILGLSALIAPIYIRKENILKNGYIYLLFTIIAFILGYDGFNSIDGILLFIMLISYITYTIKKGGCCEEMGENNG SIVKSVLFTILGLLAVIVGSSLFVSGAKDIALFLGISDKIIGFTLVAFGTSLPELVVSITAVKRKLGDMVIGNIIGSNIA NIGGALALASIISPLPKVPFEMTVNLLLTSLMVLFMSKHILEFIKKNKDKIHNKKDNNDNETIYSKINRIDGTILILIYL GFILFISNIL >Mature_330_residues MVEILFSVFILLLGLALLNYGSDWFVVGSSKVAKHLNVSNFVIGATVVAFGTSLPEIITSVYASYIGSTGIAVGNSLGSN IANVGLILGLSALIAPIYIRKENILKNGYIYLLFTIIAFILGYDGFNSIDGILLFIMLISYITYTIKKGGCCEEMGENNG SIVKSVLFTILGLLAVIVGSSLFVSGAKDIALFLGISDKIIGFTLVAFGTSLPELVVSITAVKRKLGDMVIGNIIGSNIA NIGGALALASIISPLPKVPFEMTVNLLLTSLMVLFMSKHILEFIKKNKDKIHNKKDNNDNETIYSKINRIDGTILILIYL GFILFISNIL
Specific function: Unknown
COG id: COG0530
COG function: function code P; Ca2+/Na+ antiporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium/potassium/calcium exchanger family [H]
Homologues:
Organism=Homo sapiens, GI4759128, Length=101, Percent_Identity=37.6237623762376, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI1789587, Length=248, Percent_Identity=33.8709677419355, Blast_Score=105, Evalue=5e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004481 - InterPro: IPR004837 [H]
Pfam domain/function: PF01699 Na_Ca_ex [H]
EC number: NA
Molecular weight: Translated: 35459; Mature: 35459
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEILFSVFILLLGLALLNYGSDWFVVGSSKVAKHLNVSNFVIGATVVAFGTSLPEIITS CHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHH VYASYIGSTGIAVGNSLGSNIANVGLILGLSALIAPIYIRKENILKNGYIYLLFTIIAFI HHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LGYDGFNSIDGILLFIMLISYITYTIKKGGCCEEMGENNGSIVKSVLFTILGLLAVIVGS HCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCC SLFVSGAKDIALFLGISDKIIGFTLVAFGTSLPELVVSITAVKRKLGDMVIGNIIGSNIA HHHHCCCHHHEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIGGALALASIISPLPKVPFEMTVNLLLTSLMVLFMSKHILEFIKKNKDKIHNKKDNNDN HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCH ETIYSKINRIDGTILILIYLGFILFISNIL HHHHHHHHHCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVEILFSVFILLLGLALLNYGSDWFVVGSSKVAKHLNVSNFVIGATVVAFGTSLPEIITS CHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHH VYASYIGSTGIAVGNSLGSNIANVGLILGLSALIAPIYIRKENILKNGYIYLLFTIIAFI HHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LGYDGFNSIDGILLFIMLISYITYTIKKGGCCEEMGENNGSIVKSVLFTILGLLAVIVGS HCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCC SLFVSGAKDIALFLGISDKIIGFTLVAFGTSLPELVVSITAVKRKLGDMVIGNIIGSNIA HHHHCCCHHHEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIGGALALASIISPLPKVPFEMTVNLLLTSLMVLFMSKHILEFIKKNKDKIHNKKDNNDN HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCH ETIYSKINRIDGTILILIYLGFILFISNIL HHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Na (I) [Periplasm]; Ca (II) [Cytoplasm] [C]
Specific reaction: Na (I) [Periplasm] + Ca (II) [Cytoplasm] = Na (I) [Cytoplasm] + Ca (II) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]