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The map label for this gene is hmvA [H]

Identifier: 150401109

GI number: 150401109

Start: 696693

End: 696995

Strand: Reverse

Name: hmvA [H]

Synonym: Maeo_0679

Alternate gene names: 150401109

Gene position: 696995-696693 (Counterclockwise)

Preceding gene: 150401110

Following gene: 150401108

Centisome position: 44.41

GC content: 29.37

Gene sequence:

>303_bases
ATGATACCCAAAGGAACAGTTAAAAGAATAATGAAACAAAATACAGATATGAATGTTTCAGCTGAATCAGTTGTAAAAAT
TGTAGAAATATTACAAGAATACATAGTCACAACTACAAGACTTGCAGAAGAAAATGCTGCAAAAGATAAAAGAAAAACCA
TAAAAGCGAGAGATGTTGAAAATTGCGACGGAGAGAGAGTAAGACAGAAAATATTAGAAGTTGCAGATAGAACTGAAAAA
GTTCAAATATTAACAAAAGAATTTTTAAAAGTGCTTTCTTCTGAATTAACAAGGGAAGAATAA

Upstream 100 bases:

>100_bases
TATTATAAAATCGTTGAAAACTCCAGCTAATACAATAAAGTATATATAAATTGCAATACATATGATATAGTATTATTAAT
ACATAACGAGAGGCCATAAC

Downstream 100 bases:

>100_bases
TAAATATTATTAAAAAAATAAAATCAAATCAATATACAAATGTGATAATATGGACATTGCAGTTGCAAAATTTTTAGGAA
CAAATTGTGATAATGATGTA

Product: transcription factor CBF/NF-Y histone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MIPKGTVKRIMKQNTDMNVSAESVVKIVEILQEYIVTTTRLAEENAAKDKRKTIKARDVENCDGERVRQKILEVADRTEK
VQILTKEFLKVLSSELTREE

Sequences:

>Translated_100_residues
MIPKGTVKRIMKQNTDMNVSAESVVKIVEILQEYIVTTTRLAEENAAKDKRKTIKARDVENCDGERVRQKILEVADRTEK
VQILTKEFLKVLSSELTREE
>Mature_100_residues
MIPKGTVKRIMKQNTDMNVSAESVVKIVEILQEYIVTTTRLAEENAAKDKRKTIKARDVENCDGERVRQKILEVADRTEK
VQILTKEFLKVLSSELTREE

Specific function: Binds and compacts DNA to form nucleosome-like structures that contain positive DNA supercoils. Increases the resistance of DNA to thermal denaturation [H]

COG id: COG2036

COG function: function code B; Histones H3 and H4

Gene ontology:

Cell location: Cytoplasm (Potential). Chromosome (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the archaeal histone HMF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003958
- InterPro:   IPR009072 [H]

Pfam domain/function: PF00808 CBFD_NFYB_HMF [H]

EC number: NA

Molecular weight: Translated: 11520; Mature: 11520

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPKGTVKRIMKQNTDMNVSAESVVKIVEILQEYIVTTTRLAEENAAKDKRKTIKARDVE
CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NCDGERVRQKILEVADRTEKVQILTKEFLKVLSSELTREE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIPKGTVKRIMKQNTDMNVSAESVVKIVEILQEYIVTTTRLAEENAAKDKRKTIKARDVE
CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NCDGERVRQKILEVADRTEKVQILTKEFLKVLSSELTREE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8464744 [H]