| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401103
Identifier: 150401103
GI number: 150401103
Start: 688910
End: 689851
Strand: Direct
Name: 150401103
Synonym: Maeo_0673
Alternate gene names: NA
Gene position: 688910-689851 (Clockwise)
Preceding gene: 150401102
Following gene: 150401104
Centisome position: 43.89
GC content: 33.76
Gene sequence:
>942_bases ATGAAGCATAATAATAATAATAACTCAAATACTATAATAGACGCCCACAAAAAAATAAAAAATATGGAAATAAGGGGGGC GGGAAGGATCGGGAGAGCCGTAGCAAGTGCTTTAAAAGAATATTCTTTAACAATTCAAAATATAGAGAATAACGAATTTA AAGAAAAAATGATTGAAGCAGGAGACATATTAAAATCAGCACGACCAACTGCGGTATCCCTCCCAAATGCTGTAAATTAT GTGTTAAGTGGATTAAATACCAATAATCCAAAGGAAAACATAATATTGAATGCCGAAGAATTTATAAAATCCTCCTCAGA AGCTACTTCAAAAATTGGAAAAATTGGCTCCAACAGAATAAAAGATGGATGGACAATATTAACTCATTGTAATTCGGAAG CCGCAATTAGTGTAATAAAAACAGCACATAACAGCGGGAAAAATATAAAAGTTATATGCACAGAGACACGACCAAGAAAC CAAGGATATTTAACAGCAAAGGCGTTGGCGGACGAAGGTATTGACACCACATTAATAGTGGATAGTGCTGTAAGATACCA CATTAAAGATGTGGATATTGTGGTGGTGGGTGCCGATGCCATAACCTCAAATGGTTGCCTTGTAAATAAAATAGGGAGCT CCCAAATAGCTTTAATGGCATATGAAAGAAAAATACCATTTTTAACAGCCGCAGAAACTTATAAATTTCACCCTAAAACA ATAATCGGGGAAACAATAGAGATTGAGGAAAGGGCAGTTGGTGAAATACATGAATTTGAGGAAAAATATAAAGATAAAAT AAAATTAAGAAATCCAGCTTTTGACATTACTCCTTCTCAATATATTGACGGAATAATAACAGAAATAGGAATTATTCCGC CACAGGGAGCTTGGCATATAATAGAAAAATATTTTGGAAATGTATTTAAGGAAACACTTTAA
Upstream 100 bases:
>100_bases AGTGCAGGCGACATTATAAAAATGATGCATGAATCATTGGAATAATTTATTAATTTATTGTATTTTTTTTATTAATTCAT ATTTGCAGGGGGTGATATTT
Downstream 100 bases:
>100_bases TATTAAAATGATAATTAATATAATTAAAAAATATCCATATGAACTACGGTGAAATTGTGAGTAAAGTTAAAGATATAAAT TTAGCTCCTGAGGGAGATTT
Product: translation initiation factor IF-2B subunit delta
Products: NA
Alternate protein names: eIF-2B GDP-GTP exchange factor [H]
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MKHNNNNNSNTIIDAHKKIKNMEIRGAGRIGRAVASALKEYSLTIQNIENNEFKEKMIEAGDILKSARPTAVSLPNAVNY VLSGLNTNNPKENIILNAEEFIKSSSEATSKIGKIGSNRIKDGWTILTHCNSEAAISVIKTAHNSGKNIKVICTETRPRN QGYLTAKALADEGIDTTLIVDSAVRYHIKDVDIVVVGADAITSNGCLVNKIGSSQIALMAYERKIPFLTAAETYKFHPKT IIGETIEIEERAVGEIHEFEEKYKDKIKLRNPAFDITPSQYIDGIITEIGIIPPQGAWHIIEKYFGNVFKETL
Sequences:
>Translated_313_residues MKHNNNNNSNTIIDAHKKIKNMEIRGAGRIGRAVASALKEYSLTIQNIENNEFKEKMIEAGDILKSARPTAVSLPNAVNY VLSGLNTNNPKENIILNAEEFIKSSSEATSKIGKIGSNRIKDGWTILTHCNSEAAISVIKTAHNSGKNIKVICTETRPRN QGYLTAKALADEGIDTTLIVDSAVRYHIKDVDIVVVGADAITSNGCLVNKIGSSQIALMAYERKIPFLTAAETYKFHPKT IIGETIEIEERAVGEIHEFEEKYKDKIKLRNPAFDITPSQYIDGIITEIGIIPPQGAWHIIEKYFGNVFKETL >Mature_313_residues MKHNNNNNSNTIIDAHKKIKNMEIRGAGRIGRAVASALKEYSLTIQNIENNEFKEKMIEAGDILKSARPTAVSLPNAVNY VLSGLNTNNPKENIILNAEEFIKSSSEATSKIGKIGSNRIKDGWTILTHCNSEAAISVIKTAHNSGKNIKVICTETRPRN QGYLTAKALADEGIDTTLIVDSAVRYHIKDVDIVVVGADAITSNGCLVNKIGSSQIALMAYERKIPFLTAAETYKFHPKT IIGETIEIEERAVGEIHEFEEKYKDKIKLRNPAFDITPSQYIDGIITEIGIIPPQGAWHIIEKYFGNVFKETL
Specific function: Catalyzes the exchange of initiation factor 2-bound GDP for GTP [H]
COG id: COG1184
COG function: function code J; Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eIF-2B alpha/beta/delta subunits family [H]
Homologues:
Organism=Homo sapiens, GI72534748, Length=329, Percent_Identity=31.306990881459, Blast_Score=126, Evalue=2e-29, Organism=Homo sapiens, GI4503503, Length=212, Percent_Identity=29.7169811320755, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI78000158, Length=284, Percent_Identity=22.5352112676056, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI78000156, Length=284, Percent_Identity=22.5352112676056, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI187607323, Length=284, Percent_Identity=22.5352112676056, Blast_Score=99, Evalue=7e-21, Organism=Homo sapiens, GI23943880, Length=147, Percent_Identity=42.1768707482993, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI7657058, Length=160, Percent_Identity=27.5, Blast_Score=65, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17557462, Length=310, Percent_Identity=30.3225806451613, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17557123, Length=200, Percent_Identity=30.5, Blast_Score=100, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6322878, Length=272, Percent_Identity=29.7794117647059, Blast_Score=112, Evalue=7e-26, Organism=Saccharomyces cerevisiae, GI6325375, Length=362, Percent_Identity=30.3867403314917, Blast_Score=97, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6321520, Length=188, Percent_Identity=31.9148936170213, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI21357667, Length=319, Percent_Identity=33.5423197492163, Blast_Score=125, Evalue=2e-29, Organism=Drosophila melanogaster, GI24651647, Length=319, Percent_Identity=33.5423197492163, Blast_Score=125, Evalue=2e-29, Organism=Drosophila melanogaster, GI21358605, Length=204, Percent_Identity=31.3725490196078, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI281364091, Length=252, Percent_Identity=26.984126984127, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI24659399, Length=252, Percent_Identity=26.984126984127, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI24659407, Length=252, Percent_Identity=26.984126984127, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI19922816, Length=252, Percent_Identity=26.984126984127, Blast_Score=86, Evalue=5e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005250 - InterPro: IPR000649 - InterPro: IPR011559 [H]
Pfam domain/function: PF01008 IF-2B [H]
EC number: NA
Molecular weight: Translated: 34593; Mature: 34593
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHNNNNNSNTIIDAHKKIKNMEIRGAGRIGRAVASALKEYSLTIQNIENNEFKEKMIEA CCCCCCCCCCEEEECHHHHHCCEEECCCHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHH GDILKSARPTAVSLPNAVNYVLSGLNTNNPKENIILNAEEFIKSSSEATSKIGKIGSNRI HHHHHHCCCCEEECCHHHHHHHHCCCCCCCCCCEEECHHHHHCCCHHHHHHHHHCCCCCC KDGWTILTHCNSEAAISVIKTAHNSGKNIKVICTETRPRNQGYLTAKALADEGIDTTLIV CCCEEEEEECCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEHHHHCCCCCEEEEE DSAVRYHIKDVDIVVVGADAITSNGCLVNKIGSSQIALMAYERKIPFLTAAETYKFHPKT EHHHEEEEEEEEEEEECCCEECCCCEEEEECCCCEEEEEEEECCCCEEEECCCEEECCHH IIGETIEIEERAVGEIHEFEEKYKDKIKLRNPAFDITPSQYIDGIITEIGIIPPQGAWHI HCCCEEEEHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHH IEKYFGNVFKETL HHHHHHHHHHHCC >Mature Secondary Structure MKHNNNNNSNTIIDAHKKIKNMEIRGAGRIGRAVASALKEYSLTIQNIENNEFKEKMIEA CCCCCCCCCCEEEECHHHHHCCEEECCCHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHH GDILKSARPTAVSLPNAVNYVLSGLNTNNPKENIILNAEEFIKSSSEATSKIGKIGSNRI HHHHHHCCCCEEECCHHHHHHHHCCCCCCCCCCEEECHHHHHCCCHHHHHHHHHCCCCCC KDGWTILTHCNSEAAISVIKTAHNSGKNIKVICTETRPRNQGYLTAKALADEGIDTTLIV CCCEEEEEECCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEHHHHCCCCCEEEEE DSAVRYHIKDVDIVVVGADAITSNGCLVNKIGSSQIALMAYERKIPFLTAAETYKFHPKT EHHHEEEEEEEEEEEECCCEECCCCEEEEECCCCEEEEEEEECCCCEEEECCCEEECCHH IIGETIEIEERAVGEIHEFEEKYKDKIKLRNPAFDITPSQYIDGIITEIGIIPPQGAWHI HCCCEEEEHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHH IEKYFGNVFKETL HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]