| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401047
Identifier: 150401047
GI number: 150401047
Start: 632281
End: 632682
Strand: Direct
Name: 150401047
Synonym: Maeo_0617
Alternate gene names: NA
Gene position: 632281-632682 (Clockwise)
Preceding gene: 150401046
Following gene: 150401054
Centisome position: 40.29
GC content: 28.61
Gene sequence:
>402_bases TTGAAAAGACAATTATATATAAAAGGCTCAAATTTTGAAAGAGAGCTCAAAAAATTATTTGAAAATAAAGGTTTTGCCGT AATTAGAAGTGCGGGAAGTCATGGTGTGGACATAGTGGCTGGAAAAAAAGGAAAAATATATGCTTTTGAATGTAAGGCCA CATCAAATGAAAAATTTTATATTTCAAATAATGATGTCGATAAATTAATAAATTTCTCGGAGCTCTTTGGAGCTATACCT TATATAGCTCTAAAAGTAAAATTACCAGGGGAGCTCCAACGGAAATCGGATAAAAAGATATTATTTATAAATCCATATCT TTTAGTTAGTTCGGGAAAAAATTATTCATTGGATTATCATAAAATATACCCAATATCGGAAAAAATTGAAGATTTATTAT AG
Upstream 100 bases:
>100_bases ACTTATTTAAAGAAATAGTTGAGGAAGAATTATCTTCAAAGTAATATAATATTATTATTTTTACTATTTTTATATAATTT TTAATGTTGGTGAGTTTGAA
Downstream 100 bases:
>100_bases TCCTTCGGAAAGCATGTTTATCGGAGCTCCAATATTATAATTTAAAATTTACTCAATCTTTTAAGCATCATTCCCTCAAC TTTAATGGGATATGTTCTTC
Product: resolvase, Holliday junction-type
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MKRQLYIKGSNFERELKKLFENKGFAVIRSAGSHGVDIVAGKKGKIYAFECKATSNEKFYISNNDVDKLINFSELFGAIP YIALKVKLPGELQRKSDKKILFINPYLLVSSGKNYSLDYHKIYPISEKIEDLL
Sequences:
>Translated_133_residues MKRQLYIKGSNFERELKKLFENKGFAVIRSAGSHGVDIVAGKKGKIYAFECKATSNEKFYISNNDVDKLINFSELFGAIP YIALKVKLPGELQRKSDKKILFINPYLLVSSGKNYSLDYHKIYPISEKIEDLL >Mature_133_residues MKRQLYIKGSNFERELKKLFENKGFAVIRSAGSHGVDIVAGKKGKIYAFECKATSNEKFYISNNDVDKLINFSELFGAIP YIALKVKLPGELQRKSDKKILFINPYLLVSSGKNYSLDYHKIYPISEKIEDLL
Specific function: Unknown
COG id: COG1591
COG function: function code L; Holliday junction resolvase - archaeal type
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011856 - InterPro: IPR002732 - InterPro: IPR014428 - InterPro: IPR011335 [H]
Pfam domain/function: PF01870 Hjc [H]
EC number: NA
Molecular weight: Translated: 15200; Mature: 15200
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRQLYIKGSNFERELKKLFENKGFAVIRSAGSHGVDIVAGKKGKIYAFECKATSNEKFY CCEEEEEECCCHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCCEEEEEECCCCCCEEE ISNNDVDKLINFSELFGAIPYIALKVKLPGELQRKSDKKILFINPYLLVSSGKNYSLDYH EECCCHHHHCCHHHHHCCCCEEEEEEECCCHHCCCCCCEEEEECCEEEEECCCCCCCCEE KIYPISEKIEDLL EECCHHHHHHHCC >Mature Secondary Structure MKRQLYIKGSNFERELKKLFENKGFAVIRSAGSHGVDIVAGKKGKIYAFECKATSNEKFY CCEEEEEECCCHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCCEEEEEECCCCCCEEE ISNNDVDKLINFSELFGAIPYIALKVKLPGELQRKSDKKILFINPYLLVSSGKNYSLDYH EECCCHHHHCCHHHHHCCCCEEEEEEECCCHHCCCCCCEEEEECCEEEEECCCCCCCCEE KIYPISEKIEDLL EECCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]