| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is rps15p
Identifier: 150401037
GI number: 150401037
Start: 621311
End: 621766
Strand: Reverse
Name: rps15p
Synonym: Maeo_0606
Alternate gene names: 150401037
Gene position: 621766-621311 (Counterclockwise)
Preceding gene: 150401038
Following gene: 150401035
Centisome position: 39.62
GC content: 33.77
Gene sequence:
>456_bases ATGGCAAGATTACACTCTGGAAAAAGAGGTTCCTCCGGTTCAACAAGACCATTAAGAACAGAAGTTCCTGCATGGGCAAA CATAACCGCTGAGGAGACCGAAGAAGTAATAGTTAAAATGGCAAAAGAAGGAAAACAATCCGCAATGATTGGATTAATTT TGAGAGATTCCTATGGAATTCCTGATGTAAAATTAGTTACTGGAAAATCAGTAGCTCAAATTATGAAAGATAACAATGTT TATCCTGAAATACCAGAAGATTTATTCAATCTAATGAAAAAGGCCATTAACTTAAGAAACCACTTAGAAGAGAATACAAA AGATATTCACTCTAAAAGAGGATTACAATTAACGGAATCCAAAATAAGAAGATTGGTAAAATATTACAGAAACACAAAAG TATTACCTGCAAAATGGAGATACTCACCAGAAACCGCAAGGTTATTGGTAGAATAA
Upstream 100 bases:
>100_bases CAATGGAAATTTATATGGCGTTAAATAAGTGGAAATGAGTTAGTGGAACAGTCCGAAGATTAACTACAATAAAAACCAAA AAAATAAAAAGGTGTATAGT
Downstream 100 bases:
>100_bases ATAAATTATTTATTTTCTTATTTTTTTTATTTTTTAAAAGTTATTTCCAAAATTCATTATAAAACAATTCAAAATCTTGA TTATATTTTTTTCCAATCTT
Product: 30S ribosomal protein S15P
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MARLHSGKRGSSGSTRPLRTEVPAWANITAEETEEVIVKMAKEGKQSAMIGLILRDSYGIPDVKLVTGKSVAQIMKDNNV YPEIPEDLFNLMKKAINLRNHLEENTKDIHSKRGLQLTESKIRRLVKYYRNTKVLPAKWRYSPETARLLVE
Sequences:
>Translated_151_residues MARLHSGKRGSSGSTRPLRTEVPAWANITAEETEEVIVKMAKEGKQSAMIGLILRDSYGIPDVKLVTGKSVAQIMKDNNV YPEIPEDLFNLMKKAINLRNHLEENTKDIHSKRGLQLTESKIRRLVKYYRNTKVLPAKWRYSPETARLLVE >Mature_150_residues ARLHSGKRGSSGSTRPLRTEVPAWANITAEETEEVIVKMAKEGKQSAMIGLILRDSYGIPDVKLVTGKSVAQIMKDNNVY PEIPEDLFNLMKKAINLRNHLEENTKDIHSKRGLQLTESKIRRLVKYYRNTKVLPAKWRYSPETARLLVE
Specific function: Unknown
COG id: COG0184
COG function: function code J; Ribosomal protein S15P/S13E
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein S15P family
Homologues:
Organism=Homo sapiens, GI4506685, Length=150, Percent_Identity=44.6666666666667, Blast_Score=144, Evalue=4e-35, Organism=Caenorhabditis elegans, GI17554774, Length=150, Percent_Identity=46, Blast_Score=144, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6320269, Length=150, Percent_Identity=44.6666666666667, Blast_Score=142, Evalue=2e-35, Organism=Drosophila melanogaster, GI85724904, Length=150, Percent_Identity=44, Blast_Score=138, Evalue=1e-33, Organism=Drosophila melanogaster, GI17136832, Length=150, Percent_Identity=44, Blast_Score=138, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RS15_META3 (A6UUL9)
Other databases:
- EMBL: CP000743 - RefSeq: YP_001324803.1 - ProteinModelPortal: A6UUL9 - SMR: A6UUL9 - STRING: A6UUL9 - GeneID: 5327657 - GenomeReviews: CP000743_GR - KEGG: mae:Maeo_0606 - eggNOG: arNOG07733 - HOGENOM: HBG747651 - OMA: IRRLVKY - ProtClustDB: PRK08561 - BioCyc: MAEO419665:MAEO_0606-MONOMER - GO: GO:0005840 - GO: GO:0006412 - HAMAP: MF_01343_A - InterPro: IPR012606 - InterPro: IPR000589 - InterPro: IPR023029 - InterPro: IPR009068 - Gene3D: G3DSA:1.10.287.10
Pfam domain/function: PF08069 Ribosomal_S13_N; PF00312 Ribosomal_S15; SSF47060 S15/NS1_bind
EC number: NA
Molecular weight: Translated: 17217; Mature: 17086
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: PS00362 RIBOSOMAL_S15
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLHSGKRGSSGSTRPLRTEVPAWANITAEETEEVIVKMAKEGKQSAMIGLILRDSYGI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHEEEEEECCCCC PDVKLVTGKSVAQIMKDNNVYPEIPEDLFNLMKKAINLRNHLEENTKDIHSKRGLQLTES CCEEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH KIRRLVKYYRNTKVLPAKWRYSPETARLLVE HHHHHHHHHHCCCCCCCCCCCCCHHHHEECC >Mature Secondary Structure ARLHSGKRGSSGSTRPLRTEVPAWANITAEETEEVIVKMAKEGKQSAMIGLILRDSYGI CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHEEEEEECCCCC PDVKLVTGKSVAQIMKDNNVYPEIPEDLFNLMKKAINLRNHLEENTKDIHSKRGLQLTES CCEEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH KIRRLVKYYRNTKVLPAKWRYSPETARLLVE HHHHHHHHHHCCCCCCCCCCCCCHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA