Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is rps15p

Identifier: 150401037

GI number: 150401037

Start: 621311

End: 621766

Strand: Reverse

Name: rps15p

Synonym: Maeo_0606

Alternate gene names: 150401037

Gene position: 621766-621311 (Counterclockwise)

Preceding gene: 150401038

Following gene: 150401035

Centisome position: 39.62

GC content: 33.77

Gene sequence:

>456_bases
ATGGCAAGATTACACTCTGGAAAAAGAGGTTCCTCCGGTTCAACAAGACCATTAAGAACAGAAGTTCCTGCATGGGCAAA
CATAACCGCTGAGGAGACCGAAGAAGTAATAGTTAAAATGGCAAAAGAAGGAAAACAATCCGCAATGATTGGATTAATTT
TGAGAGATTCCTATGGAATTCCTGATGTAAAATTAGTTACTGGAAAATCAGTAGCTCAAATTATGAAAGATAACAATGTT
TATCCTGAAATACCAGAAGATTTATTCAATCTAATGAAAAAGGCCATTAACTTAAGAAACCACTTAGAAGAGAATACAAA
AGATATTCACTCTAAAAGAGGATTACAATTAACGGAATCCAAAATAAGAAGATTGGTAAAATATTACAGAAACACAAAAG
TATTACCTGCAAAATGGAGATACTCACCAGAAACCGCAAGGTTATTGGTAGAATAA

Upstream 100 bases:

>100_bases
CAATGGAAATTTATATGGCGTTAAATAAGTGGAAATGAGTTAGTGGAACAGTCCGAAGATTAACTACAATAAAAACCAAA
AAAATAAAAAGGTGTATAGT

Downstream 100 bases:

>100_bases
ATAAATTATTTATTTTCTTATTTTTTTTATTTTTTAAAAGTTATTTCCAAAATTCATTATAAAACAATTCAAAATCTTGA
TTATATTTTTTTCCAATCTT

Product: 30S ribosomal protein S15P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MARLHSGKRGSSGSTRPLRTEVPAWANITAEETEEVIVKMAKEGKQSAMIGLILRDSYGIPDVKLVTGKSVAQIMKDNNV
YPEIPEDLFNLMKKAINLRNHLEENTKDIHSKRGLQLTESKIRRLVKYYRNTKVLPAKWRYSPETARLLVE

Sequences:

>Translated_151_residues
MARLHSGKRGSSGSTRPLRTEVPAWANITAEETEEVIVKMAKEGKQSAMIGLILRDSYGIPDVKLVTGKSVAQIMKDNNV
YPEIPEDLFNLMKKAINLRNHLEENTKDIHSKRGLQLTESKIRRLVKYYRNTKVLPAKWRYSPETARLLVE
>Mature_150_residues
ARLHSGKRGSSGSTRPLRTEVPAWANITAEETEEVIVKMAKEGKQSAMIGLILRDSYGIPDVKLVTGKSVAQIMKDNNVY
PEIPEDLFNLMKKAINLRNHLEENTKDIHSKRGLQLTESKIRRLVKYYRNTKVLPAKWRYSPETARLLVE

Specific function: Unknown

COG id: COG0184

COG function: function code J; Ribosomal protein S15P/S13E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S15P family

Homologues:

Organism=Homo sapiens, GI4506685, Length=150, Percent_Identity=44.6666666666667, Blast_Score=144, Evalue=4e-35,
Organism=Caenorhabditis elegans, GI17554774, Length=150, Percent_Identity=46, Blast_Score=144, Evalue=1e-35,
Organism=Saccharomyces cerevisiae, GI6320269, Length=150, Percent_Identity=44.6666666666667, Blast_Score=142, Evalue=2e-35,
Organism=Drosophila melanogaster, GI85724904, Length=150, Percent_Identity=44, Blast_Score=138, Evalue=1e-33,
Organism=Drosophila melanogaster, GI17136832, Length=150, Percent_Identity=44, Blast_Score=138, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS15_META3 (A6UUL9)

Other databases:

- EMBL:   CP000743
- RefSeq:   YP_001324803.1
- ProteinModelPortal:   A6UUL9
- SMR:   A6UUL9
- STRING:   A6UUL9
- GeneID:   5327657
- GenomeReviews:   CP000743_GR
- KEGG:   mae:Maeo_0606
- eggNOG:   arNOG07733
- HOGENOM:   HBG747651
- OMA:   IRRLVKY
- ProtClustDB:   PRK08561
- BioCyc:   MAEO419665:MAEO_0606-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_01343_A
- InterPro:   IPR012606
- InterPro:   IPR000589
- InterPro:   IPR023029
- InterPro:   IPR009068
- Gene3D:   G3DSA:1.10.287.10

Pfam domain/function: PF08069 Ribosomal_S13_N; PF00312 Ribosomal_S15; SSF47060 S15/NS1_bind

EC number: NA

Molecular weight: Translated: 17217; Mature: 17086

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: PS00362 RIBOSOMAL_S15

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLHSGKRGSSGSTRPLRTEVPAWANITAEETEEVIVKMAKEGKQSAMIGLILRDSYGI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHEEEEEECCCCC
PDVKLVTGKSVAQIMKDNNVYPEIPEDLFNLMKKAINLRNHLEENTKDIHSKRGLQLTES
CCEEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
KIRRLVKYYRNTKVLPAKWRYSPETARLLVE
HHHHHHHHHHCCCCCCCCCCCCCHHHHEECC
>Mature Secondary Structure 
ARLHSGKRGSSGSTRPLRTEVPAWANITAEETEEVIVKMAKEGKQSAMIGLILRDSYGI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHEEEEEECCCCC
PDVKLVTGKSVAQIMKDNNVYPEIPEDLFNLMKKAINLRNHLEENTKDIHSKRGLQLTES
CCEEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
KIRRLVKYYRNTKVLPAKWRYSPETARLLVE
HHHHHHHHHHCCCCCCCCCCCCCHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA