| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401038
Identifier: 150401038
GI number: 150401038
Start: 622048
End: 622923
Strand: Reverse
Name: 150401038
Synonym: Maeo_0607
Alternate gene names: NA
Gene position: 622923-622048 (Counterclockwise)
Preceding gene: 150401039
Following gene: 150401037
Centisome position: 39.69
GC content: 33.56
Gene sequence:
>876_bases TTGAAAACTAAAAAATTAATAATTGACGAAAGAGAAAAAAAATATTTATTAAAAAACAAAGTAAATGAGTTTGGAAATGA TTTGGGCGTAATTAATATATCGGATAAACCATTAGGAACAGCAATAAAGTCCCACAATGGCCACGAATTTTATTTAGTCG AGCCAACAACCTACGATATTATTAAGAAAATGAAAAGAAGTGTAACTACGCTGTTGCCAAAAGATATTGGTATGATAATA GCATATTGCGGTATAGAGGACGGGGAGACAGTGGTAGAAGCCGGAACAGGCTCCGCAGCTTTAACGATATATTTAGCAAA TGCCGTTGGTAAAAATGGTAAAGTAATTACCTATGAAAAAAGAGCAGATGCTGCAAAAATAGCAAGAACAAATTTAGAAA TTGTGGGGGCAGTGAAAGAAAACCAAAAAATAATTGGAATTGATGAAGAGGAACAAACCGAAAGCGAAAAAGAAGAAATA ATAGAAACAAACGAAATAAAAGAAAGCGGATTATGTAATGTAATTCAAAAAATAGGGGATATAACCGAAGGAATTGAAGA AACCAATATTGATGTATTGGTTTTAGATATGCCTGACCCGTGGAATGTAGTAGAACATGCTAAAAAAGCTTTAAATCCTT CAAAAGGAAGAATAGCTATGTATGTTCCTTATATCGAACAGGCTAAAAAAGGAGTTGAAGCTTTAAAAGAACGAGGATTT TTAGATATTTTAACTGTTGAATGTATTGTTAGAAATATGGATATTTCAGAAAAAGGAGTTAGACCATCTACGAGAATGGT GGGACATACAGGATATATCACAGTGGCGAGAGTTAGACCACAACAAGAACCAGAGCAGGAACAGGAACAACTATAA
Upstream 100 bases:
>100_bases TATTAAAAAAAATTGAAGATAAAAATACCGTAGATAAAATTAAAGATTCAAAACGCATTAAAACCAATATAGAATTAAAA CAAACTAAACTGGTGGAATT
Downstream 100 bases:
>100_bases AAATAATAAATGTGGGAGGTTAGGAGCTCCCCTATATACCATATACAAAACATTTATATATTATATTCCCATATCCTATT TAGTCGTAAAGCTTGAAGAG
Product: tRNA methyltransferase complex GCD14 subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MKTKKLIIDEREKKYLLKNKVNEFGNDLGVINISDKPLGTAIKSHNGHEFYLVEPTTYDIIKKMKRSVTTLLPKDIGMII AYCGIEDGETVVEAGTGSAALTIYLANAVGKNGKVITYEKRADAAKIARTNLEIVGAVKENQKIIGIDEEEQTESEKEEI IETNEIKESGLCNVIQKIGDITEGIEETNIDVLVLDMPDPWNVVEHAKKALNPSKGRIAMYVPYIEQAKKGVEALKERGF LDILTVECIVRNMDISEKGVRPSTRMVGHTGYITVARVRPQQEPEQEQEQL
Sequences:
>Translated_291_residues MKTKKLIIDEREKKYLLKNKVNEFGNDLGVINISDKPLGTAIKSHNGHEFYLVEPTTYDIIKKMKRSVTTLLPKDIGMII AYCGIEDGETVVEAGTGSAALTIYLANAVGKNGKVITYEKRADAAKIARTNLEIVGAVKENQKIIGIDEEEQTESEKEEI IETNEIKESGLCNVIQKIGDITEGIEETNIDVLVLDMPDPWNVVEHAKKALNPSKGRIAMYVPYIEQAKKGVEALKERGF LDILTVECIVRNMDISEKGVRPSTRMVGHTGYITVARVRPQQEPEQEQEQL >Mature_291_residues MKTKKLIIDEREKKYLLKNKVNEFGNDLGVINISDKPLGTAIKSHNGHEFYLVEPTTYDIIKKMKRSVTTLLPKDIGMII AYCGIEDGETVVEAGTGSAALTIYLANAVGKNGKVITYEKRADAAKIARTNLEIVGAVKENQKIIGIDEEEQTESEKEEI IETNEIKESGLCNVIQKIGDITEGIEETNIDVLVLDMPDPWNVVEHAKKALNPSKGRIAMYVPYIEQAKKGVEALKERGF LDILTVECIVRNMDISEKGVRPSTRMVGHTGYITVARVRPQQEPEQEQEQL
Specific function: Unknown
COG id: COG2519
COG function: function code J; tRNA(1-methyladenosine) methyltransferase and related methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. TRM61 family [H]
Homologues:
Organism=Homo sapiens, GI222831587, Length=198, Percent_Identity=29.2929292929293, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI123173772, Length=273, Percent_Identity=24.1758241758242, Blast_Score=85, Evalue=8e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014816 [H]
Pfam domain/function: PF08704 GCD14 [H]
EC number: =2.1.1.36 [H]
Molecular weight: Translated: 32454; Mature: 32454
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKKLIIDEREKKYLLKNKVNEFGNDLGVINISDKPLGTAIKSHNGHEFYLVEPTTYDI CCCCCCEECCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHCCCCCEEEEECCCHHHH IKKMKRSVTTLLPKDIGMIIAYCGIEDGETVVEAGTGSAALTIYLANAVGKNGKVITYEK HHHHHHHHHHHCHHHHHHEEEEECCCCCCEEEECCCCCEEEEEEEEECCCCCCCEEEEEC RADAAKIARTNLEIVGAVKENQKIIGIDEEEQTESEKEEIIETNEIKESGLCNVIQKIGD CCCHHHHHHCCEEEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH ITEGIEETNIDVLVLDMPDPWNVVEHAKKALNPSKGRIAMYVPYIEQAKKGVEALKERGF HHCCHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHCCC LDILTVECIVRNMDISEKGVRPSTRMVGHTGYITVARVRPQQEPEQEQEQL EEEHHHHHHHHCCCCCCCCCCCCHHEECCCCEEEEEEECCCCCCCHHHHCC >Mature Secondary Structure MKTKKLIIDEREKKYLLKNKVNEFGNDLGVINISDKPLGTAIKSHNGHEFYLVEPTTYDI CCCCCCEECCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHCCCCCEEEEECCCHHHH IKKMKRSVTTLLPKDIGMIIAYCGIEDGETVVEAGTGSAALTIYLANAVGKNGKVITYEK HHHHHHHHHHHCHHHHHHEEEEECCCCCCEEEECCCCCEEEEEEEEECCCCCCCEEEEEC RADAAKIARTNLEIVGAVKENQKIIGIDEEEQTESEKEEIIETNEIKESGLCNVIQKIGD CCCHHHHHHCCEEEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH ITEGIEETNIDVLVLDMPDPWNVVEHAKKALNPSKGRIAMYVPYIEQAKKGVEALKERGF HHCCHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHCCC LDILTVECIVRNMDISEKGVRPSTRMVGHTGYITVARVRPQQEPEQEQEQL EEEHHHHHHHHCCCCCCCCCCCCHHEECCCCEEEEEEECCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]