Click here to switch to the map view.

The map label for this gene is 150401024

Identifier: 150401024

GI number: 150401024

Start: 609211

End: 609771

Strand: Reverse

Name: 150401024

Synonym: Maeo_0593

Alternate gene names: NA

Gene position: 609771-609211 (Counterclockwise)

Preceding gene: 150401025

Following gene: 150401022

Centisome position: 38.85

GC content: 29.95

Gene sequence:

>561_bases
ATGGATACAGCTATGAATGTTGAAGTTTTAAAAATTCCAAAAGAAAGAATTGGAGTTATAGTAGGAAAAGGCGGAGAAAT
TAAAAATAGAATAGAAAAAGAATTAAAAGTAGAAATTGATATTGAAGAAGATGGAGAAATAACAATATTTTCCACAAAAG
AACAGGAAGACCCACTGGCAACTTGGAAAGCAAGGGACATAATAAAGGCAATAGGCAGGGGATTTAATCCTGAAAAATCA
TTAAAATTAATTTCTGATGATTATATTATTGAAATAATAGATATTACAGAACATGCCAGTTCAGATAATGCTGTCAAAAG
ATTAAAGGGAAGAGTAATCGGAAGTGGTGGAAAATCCAGAAGATATATTGAAGAATTAACTGATACAGATGTATCTGTTT
ATGGAAAAACAATTGCCGTATTGGGAGATTATGAATCTGTTCAAATAGCAAAAGAAGCCATAAATATGATATTAAGGGGA
AATTCTCACTCTAAAATGTATAAATACCTTGAAAGACATAGGCAAGATATTAAAAGAAAAGAATTGGAACTTTGGAAATA
A

Upstream 100 bases:

>100_bases
AATTTTTATATATTTTTTATTAATTTATAACTCAGTATAATATAATACAAATATTTTTTTAAAATAAAAAATTTTAATAA
TATAGTTTTAAGTGATAATT

Downstream 100 bases:

>100_bases
ATTAATTAAATATTATAATTTACTTCTTTTTCCTCGGAGCTCCTTGATTTTTTTAATCATAAGCCCGTTTTTGTTATTGT
CCTCATCATTGTCAGAAGTT

Product: putative RNA-processing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MDTAMNVEVLKIPKERIGVIVGKGGEIKNRIEKELKVEIDIEEDGEITIFSTKEQEDPLATWKARDIIKAIGRGFNPEKS
LKLISDDYIIEIIDITEHASSDNAVKRLKGRVIGSGGKSRRYIEELTDTDVSVYGKTIAVLGDYESVQIAKEAINMILRG
NSHSKMYKYLERHRQDIKRKELELWK

Sequences:

>Translated_186_residues
MDTAMNVEVLKIPKERIGVIVGKGGEIKNRIEKELKVEIDIEEDGEITIFSTKEQEDPLATWKARDIIKAIGRGFNPEKS
LKLISDDYIIEIIDITEHASSDNAVKRLKGRVIGSGGKSRRYIEELTDTDVSVYGKTIAVLGDYESVQIAKEAINMILRG
NSHSKMYKYLERHRQDIKRKELELWK
>Mature_186_residues
MDTAMNVEVLKIPKERIGVIVGKGGEIKNRIEKELKVEIDIEEDGEITIFSTKEQEDPLATWKARDIIKAIGRGFNPEKS
LKLISDDYIIEIIDITEHASSDNAVKRLKGRVIGSGGKSRRYIEELTDTDVSVYGKTIAVLGDYESVQIAKEAINMILRG
NSHSKMYKYLERHRQDIKRKELELWK

Specific function: Unknown

COG id: COG1094

COG function: function code R; Predicted RNA-binding protein (contains KH domains)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 KH domains [H]

Homologues:

Organism=Homo sapiens, GI10047140, Length=123, Percent_Identity=34.1463414634146, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17537417, Length=167, Percent_Identity=26.9461077844311, Blast_Score=64, Evalue=5e-11,
Organism=Drosophila melanogaster, GI17137346, Length=117, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004087
- InterPro:   IPR019964
- InterPro:   IPR004088
- InterPro:   IPR018111 [H]

Pfam domain/function: PF00013 KH_1 [H]

EC number: NA

Molecular weight: Translated: 21217; Mature: 21217

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTAMNVEVLKIPKERIGVIVGKGGEIKNRIEKELKVEIDIEEDGEITIFSTKEQEDPLA
CCCCCCEEEEECCHHHEEEEEECCCHHHHHHHHHEEEEEEECCCCCEEEEECCCCCCCCH
TWKARDIIKAIGRGFNPEKSLKLISDDYIIEIIDITEHASSDNAVKRLKGRVIGSGGKSR
HHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEEEECCCCCCCHHHHHHHCEEECCCCCCH
RYIEELTDTDVSVYGKTIAVLGDYESVQIAKEAINMILRGNSHSKMYKYLERHRQDIKRK
HHHHHHHCCCHHHHCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
ELELWK
HHHCCC
>Mature Secondary Structure
MDTAMNVEVLKIPKERIGVIVGKGGEIKNRIEKELKVEIDIEEDGEITIFSTKEQEDPLA
CCCCCCEEEEECCHHHEEEEEECCCHHHHHHHHHEEEEEEECCCCCEEEEECCCCCCCCH
TWKARDIIKAIGRGFNPEKSLKLISDDYIIEIIDITEHASSDNAVKRLKGRVIGSGGKSR
HHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEEEECCCCCCCHHHHHHHCEEECCCCCCH
RYIEELTDTDVSVYGKTIAVLGDYESVQIAKEAINMILRGNSHSKMYKYLERHRQDIKRK
HHHHHHHCCCHHHHCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
ELELWK
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]