| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401017
Identifier: 150401017
GI number: 150401017
Start: 604450
End: 605406
Strand: Direct
Name: 150401017
Synonym: Maeo_0586
Alternate gene names: NA
Gene position: 604450-605406 (Clockwise)
Preceding gene: 150401007
Following gene: 150401018
Centisome position: 38.51
GC content: 31.97
Gene sequence:
>957_bases ATGGAAACAACAGATGAGATAGGACAGGTAACTATTAAAGATGTATATTCAACATCAGAAGAAGAAAAAGAAAGTAGAAG GTCAAAATTTGCCCATGCTACAAAAGTACATCCATGCTATAATGAAAAATTGCACCACAAAATAGGGAGAGTGCATCTTC CAGTAGCACCAAAATGTAATATTGCATGTAGGTTTTGTAGGCGAAGTGTGGGTAGCGAATGCTGTGAAGATAGACCAGCA GTAGCTAGTCGTATAATGAAGCCATCAGAAGTTGAGGAATATATGACTGAAACACTTAAAAAAATGCCAAATTTAAAAGT TGTGGGTATTGCAGGTCCAGGAGATAGTTTATTTAATAAAGAAACTTTTGAAACTTTTGAAATTATTGATGAAAAATTTC CAGACTTAGTAAAATGTTTATCTACAAATGGATTATTGCTTCCAAAATATGTTAAAAAAATAGCGGATTTGAATATAAAA ACCATTACAACCACGGTTAACGCTATTGACCCAGAAATACTTAAAGAAATTGTAGATTGGGTATATTATGAAAAGAAAAC CTACAAAGGCATTGATGGAGCAAAATTATTAATTAAAAATCAGAAGGAAGGAATTAGAAAAGCAGATCAGGAAGGACTAG TCGTAAAAATTAACACGGTTCTTATTCCCGAATTAAATTTAAACCATGTAAAAGATATTGCAAAAGAATTTGAAGATATT GCATATTTGCAAAATGTAATCCCTCTTATACCAATGTATAAAATGGACCATTTAAGCAAACCAACCTGTGAGGAAATAAG TAAGGTAAGGGACGAAAGCGAAGAACATTTACAACAATTTAGAGCTTGTCAGCAATGTAGGGCAGATGCCGCAGGTCTTT TAACTGAAAAGGAACATTTAGAAAATAAAAAAGGAATGAAATTAAATATTTACGATTTAAAACATTTCTCACATTAA
Upstream 100 bases:
>100_bases TATTTATAAGATTATACGATATGGTATTATATAAATTAATATATCGGTGCATAAGTAATATTTATAATATAAAGGAGCTC CCTTAAACGGAGGAGATAAG
Downstream 100 bases:
>100_bases ATATAAAATAAATATTAAAATAAACTAAAAAATATTAAAATAATATAAAATAAAATAATCGAGTGAAAATTTATGGAAAA AGTAGTAATTACAATAACCG
Product: radical SAM domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues METTDEIGQVTIKDVYSTSEEEKESRRSKFAHATKVHPCYNEKLHHKIGRVHLPVAPKCNIACRFCRRSVGSECCEDRPA VASRIMKPSEVEEYMTETLKKMPNLKVVGIAGPGDSLFNKETFETFEIIDEKFPDLVKCLSTNGLLLPKYVKKIADLNIK TITTTVNAIDPEILKEIVDWVYYEKKTYKGIDGAKLLIKNQKEGIRKADQEGLVVKINTVLIPELNLNHVKDIAKEFEDI AYLQNVIPLIPMYKMDHLSKPTCEEISKVRDESEEHLQQFRACQQCRADAAGLLTEKEHLENKKGMKLNIYDLKHFSH
Sequences:
>Translated_318_residues METTDEIGQVTIKDVYSTSEEEKESRRSKFAHATKVHPCYNEKLHHKIGRVHLPVAPKCNIACRFCRRSVGSECCEDRPA VASRIMKPSEVEEYMTETLKKMPNLKVVGIAGPGDSLFNKETFETFEIIDEKFPDLVKCLSTNGLLLPKYVKKIADLNIK TITTTVNAIDPEILKEIVDWVYYEKKTYKGIDGAKLLIKNQKEGIRKADQEGLVVKINTVLIPELNLNHVKDIAKEFEDI AYLQNVIPLIPMYKMDHLSKPTCEEISKVRDESEEHLQQFRACQQCRADAAGLLTEKEHLENKKGMKLNIYDLKHFSH >Mature_318_residues METTDEIGQVTIKDVYSTSEEEKESRRSKFAHATKVHPCYNEKLHHKIGRVHLPVAPKCNIACRFCRRSVGSECCEDRPA VASRIMKPSEVEEYMTETLKKMPNLKVVGIAGPGDSLFNKETFETFEIIDEKFPDLVKCLSTNGLLLPKYVKKIADLNIK TITTTVNAIDPEILKEIVDWVYYEKKTYKGIDGAKLLIKNQKEGIRKADQEGLVVKINTVLIPELNLNHVKDIAKEFEDI AYLQNVIPLIPMYKMDHLSKPTCEEISKVRDESEEHLQQFRACQQCRADAAGLLTEKEHLENKKGMKLNIYDLKHFSH
Specific function: Unknown
COG id: COG0535
COG function: function code R; Predicted Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moaA/nifB/pqqE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 36390; Mature: 36390
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METTDEIGQVTIKDVYSTSEEEKESRRSKFAHATKVHPCYNEKLHHKIGRVHLPVAPKCN CCCCHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEECCCCCCCH IACRFCRRSVGSECCEDRPAVASRIMKPSEVEEYMTETLKKMPNLKVVGIAGPGDSLFNK HHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHCCH ETFETFEIIDEKFPDLVKCLSTNGLLLPKYVKKIADLNIKTITTTVNAIDPEILKEIVDW HHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCEEEEEEHHHCCHHHHHHHHHH VYYEKKTYKGIDGAKLLIKNQKEGIRKADQEGLVVKINTVLIPELNLNHVKDIAKEFEDI HHHHHHHCCCCCCHHHEECCHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHH AYLQNVIPLIPMYKMDHLSKPTCEEISKVRDESEEHLQQFRACQQCRADAAGLLTEKEHL HHHHHHHHHCCCHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENKKGMKLNIYDLKHFSH HCCCCCEEEEEECCCCCC >Mature Secondary Structure METTDEIGQVTIKDVYSTSEEEKESRRSKFAHATKVHPCYNEKLHHKIGRVHLPVAPKCN CCCCHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEECCCCCCCH IACRFCRRSVGSECCEDRPAVASRIMKPSEVEEYMTETLKKMPNLKVVGIAGPGDSLFNK HHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHCCH ETFETFEIIDEKFPDLVKCLSTNGLLLPKYVKKIADLNIKTITTTVNAIDPEILKEIVDW HHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCEEEEEEHHHCCHHHHHHHHHH VYYEKKTYKGIDGAKLLIKNQKEGIRKADQEGLVVKINTVLIPELNLNHVKDIAKEFEDI HHHHHHHCCCCCCHHHEECCHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHH AYLQNVIPLIPMYKMDHLSKPTCEEISKVRDESEEHLQQFRACQQCRADAAGLLTEKEHL HHHHHHHHHCCCHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENKKGMKLNIYDLKHFSH HCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]