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The map label for this gene is ydcP [C]

Identifier: 150401007

GI number: 150401007

Start: 594227

End: 595492

Strand: Direct

Name: ydcP [C]

Synonym: Maeo_0576

Alternate gene names: 150401007

Gene position: 594227-595492 (Clockwise)

Preceding gene: 150401004

Following gene: 150401017

Centisome position: 37.86

GC content: 30.73

Gene sequence:

>1266_bases
ATGGTTGAATTGCTGGCACCTGCACGAGATTTAACATGCTTAAAAACTGCCATTAATTATGGTGCAGATGCAGTTTATTG
TGGTTTAAAAGAGTTAAACATGAGATTTACAGTTAAAAATTTTAATAGAGATGAATTAAAGGAAGGAATAAAATTTGCAC
ACGAAAATAATAAAAAAGTCTATTTATGCACAAATACCGTTGTTTATGAAAATGATTTGAAGAAATTAAATGATATTTTT
GATTTTGCCAATAGTTCAGAAGTTGATGCAGTAATAGTTAGCGATTTGGGAGCAATGGAACTGGCAAAAGAGTATGGTCT
TAGAATCCATGCAAGCGTTCAAACAAATATTACTAACTCATTAACTGCTAAATTTTATTCAAAATTTGCAAAAAGGATAA
TTTTATCAAGGGAATTAACATTGAACCAGATAAAAGATATTAGAAACAATTTAAAAAATAATAATGAGAATGATAATGGC
AAATATAACAATAATTATTATAATTTAGAGCTCGAAGGATTTATTCACGGAGCTCTCTGTGTTGCACTAAGTGGAAGATG
TTTTTTAAGCTCCTACCTATTTAACAGAAATGCAAATTGTGGGGACTGCCTTCAACCATGTAGGAGAAAATGGAAGCTAA
TAAATGAACATAATGATGGCACACACGAACTTATTTGTGAAGGTAAATATTTACTATCTCCAAAAGATATTTGCACAATT
GAGCATGTCCCGGAGCTAATGGAGGCATTGGATAGCTTTAAAATAGAGGGCCGGGCTAAAAATGCCGACTATGTAATGAG
AACCACAAAAACATACAGAGATGCAATTAATTCAGTAATTGATGGAACCTATGATGAAAAAATCCCATACTTCAAAAGGG
AGCTCCAAAAAATATATAATAGAGAATATGACACAGGATTCTATTTCAGGGATTTAACTACAAATCATGACTTCCAACAT
GAAAAAGAGGGGAATTTATCACCATACACAAAAATAGAAATCGGAACAGTGGTAAATTTCTATAAAAAACCAATGGTAGC
GGAAATAAAGTTAATTGGAGATTTAAAAATTGGAGATAATGTATTAATAATTGGAAACAAAACAGGCTGTGTGGAAGAAA
CAATATCCTCAATACAAATAAATAGTAATCCAAAAGATATAGGGCAAAAGGGGCAAAATATTGGCGTAAAATTAAATAAT
ATTGTGAGAGAACGAGACAAAGTATTTATCCTAAAAGAAAAAGAAATAGTAAATAAAGAAAATTAA

Upstream 100 bases:

>100_bases
ACATATACATAATGTCCTTATCCATGGGTCATAATATAATTTTTATAATATAAATGCATGATGGTATAATGTTAATCTAA
ATATTTAATCCGGTGAAAAT

Downstream 100 bases:

>100_bases
AAAGATGATATTTTATGGAGCTCCAATATTTTACTATTCACTTTCAAAACTAAAATATATTAAAAATAATATCAATAAGA
AAAAATAACATTAAATAAGA

Product: peptidase U32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MVELLAPARDLTCLKTAINYGADAVYCGLKELNMRFTVKNFNRDELKEGIKFAHENNKKVYLCTNTVVYENDLKKLNDIF
DFANSSEVDAVIVSDLGAMELAKEYGLRIHASVQTNITNSLTAKFYSKFAKRIILSRELTLNQIKDIRNNLKNNNENDNG
KYNNNYYNLELEGFIHGALCVALSGRCFLSSYLFNRNANCGDCLQPCRRKWKLINEHNDGTHELICEGKYLLSPKDICTI
EHVPELMEALDSFKIEGRAKNADYVMRTTKTYRDAINSVIDGTYDEKIPYFKRELQKIYNREYDTGFYFRDLTTNHDFQH
EKEGNLSPYTKIEIGTVVNFYKKPMVAEIKLIGDLKIGDNVLIIGNKTGCVEETISSIQINSNPKDIGQKGQNIGVKLNN
IVRERDKVFILKEKEIVNKEN

Sequences:

>Translated_421_residues
MVELLAPARDLTCLKTAINYGADAVYCGLKELNMRFTVKNFNRDELKEGIKFAHENNKKVYLCTNTVVYENDLKKLNDIF
DFANSSEVDAVIVSDLGAMELAKEYGLRIHASVQTNITNSLTAKFYSKFAKRIILSRELTLNQIKDIRNNLKNNNENDNG
KYNNNYYNLELEGFIHGALCVALSGRCFLSSYLFNRNANCGDCLQPCRRKWKLINEHNDGTHELICEGKYLLSPKDICTI
EHVPELMEALDSFKIEGRAKNADYVMRTTKTYRDAINSVIDGTYDEKIPYFKRELQKIYNREYDTGFYFRDLTTNHDFQH
EKEGNLSPYTKIEIGTVVNFYKKPMVAEIKLIGDLKIGDNVLIIGNKTGCVEETISSIQINSNPKDIGQKGQNIGVKLNN
IVRERDKVFILKEKEIVNKEN
>Mature_421_residues
MVELLAPARDLTCLKTAINYGADAVYCGLKELNMRFTVKNFNRDELKEGIKFAHENNKKVYLCTNTVVYENDLKKLNDIF
DFANSSEVDAVIVSDLGAMELAKEYGLRIHASVQTNITNSLTAKFYSKFAKRIILSRELTLNQIKDIRNNLKNNNENDNG
KYNNNYYNLELEGFIHGALCVALSGRCFLSSYLFNRNANCGDCLQPCRRKWKLINEHNDGTHELICEGKYLLSPKDICTI
EHVPELMEALDSFKIEGRAKNADYVMRTTKTYRDAINSVIDGTYDEKIPYFKRELQKIYNREYDTGFYFRDLTTNHDFQH
EKEGNLSPYTKIEIGTVVNFYKKPMVAEIKLIGDLKIGDNVLIIGNKTGCVEETISSIQINSNPKDIGQKGQNIGVKLNN
IVRERDKVFILKEKEIVNKEN

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI87081910, Length=282, Percent_Identity=35.8156028368794, Blast_Score=159, Evalue=4e-40,
Organism=Escherichia coli, GI1789548, Length=309, Percent_Identity=33.0097087378641, Blast_Score=155, Evalue=4e-39,
Organism=Escherichia coli, GI1788397, Length=371, Percent_Identity=32.0754716981132, Blast_Score=150, Evalue=2e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539
- InterPro:   IPR009000 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 48265; Mature: 48265

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: PS00622 HTH_LUXR_1 ; PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVELLAPARDLTCLKTAINYGADAVYCGLKELNMRFTVKNFNRDELKEGIKFAHENNKKV
CCCCCCCCCHHHHHHHHHHCCCCEEEECHHHCCEEEEEECCCHHHHHHHHHHHCCCCCEE
YLCTNTVVYENDLKKLNDIFDFANSSEVDAVIVSDLGAMELAKEYGLRIHASVQTNITNS
EEEECEEEECHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHCCCEEEEEEECCCHHH
LTAKFYSKFAKRIILSRELTLNQIKDIRNNLKNNNENDNGKYNNNYYNLELEGFIHGALC
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHH
VALSGRCFLSSYLFNRNANCGDCLQPCRRKWKLINEHNDGTHELICEGKYLLSPKDICTI
HHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEECCHHHEEH
EHVPELMEALDSFKIEGRAKNADYVMRTTKTYRDAINSVIDGTYDEKIPYFKRELQKIYN
HHHHHHHHHHHCCEECCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC
REYDTGFYFRDLTTNHDFQHEKEGNLSPYTKIEIGTVVNFYKKPMVAEIKLIGDLKIGDN
CCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCEEEEEEEEEEEECCE
VLIIGNKTGCVEETISSIQINSNPKDIGQKGQNIGVKLNNIVRERDKVFILKEKEIVNKE
EEEEECCCCCHHHHHHHEEECCCHHHHHCCCCCCCEEHHHHHHCCCCEEEEECHHHCCCC
N
C
>Mature Secondary Structure
MVELLAPARDLTCLKTAINYGADAVYCGLKELNMRFTVKNFNRDELKEGIKFAHENNKKV
CCCCCCCCCHHHHHHHHHHCCCCEEEECHHHCCEEEEEECCCHHHHHHHHHHHCCCCCEE
YLCTNTVVYENDLKKLNDIFDFANSSEVDAVIVSDLGAMELAKEYGLRIHASVQTNITNS
EEEECEEEECHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHCCCEEEEEEECCCHHH
LTAKFYSKFAKRIILSRELTLNQIKDIRNNLKNNNENDNGKYNNNYYNLELEGFIHGALC
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHH
VALSGRCFLSSYLFNRNANCGDCLQPCRRKWKLINEHNDGTHELICEGKYLLSPKDICTI
HHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEECCHHHEEH
EHVPELMEALDSFKIEGRAKNADYVMRTTKTYRDAINSVIDGTYDEKIPYFKRELQKIYN
HHHHHHHHHHHCCEECCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC
REYDTGFYFRDLTTNHDFQHEKEGNLSPYTKIEIGTVVNFYKKPMVAEIKLIGDLKIGDN
CCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCEEEEEEEEEEEECCE
VLIIGNKTGCVEETISSIQINSNPKDIGQKGQNIGVKLNNIVRERDKVFILKEKEIVNKE
EEEEECCCCCHHHHHHHEEECCCHHHHHCCCCCCCEEHHHHHHCCCCEEEEECHHHCCCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]