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The map label for this gene is fdhB [H]

Identifier: 150401008

GI number: 150401008

Start: 595698

End: 596822

Strand: Reverse

Name: fdhB [H]

Synonym: Maeo_0577

Alternate gene names: 150401008

Gene position: 596822-595698 (Counterclockwise)

Preceding gene: 150401009

Following gene: 150401006

Centisome position: 38.03

GC content: 34.93

Gene sequence:

>1125_bases
ATGAAATACTTAATCCAATCAACAGATGAAAACATATTAAAACATGCTGAATGTGGTGGGGCGGTGTCTGCATTATTCAA
ATATCTTTTGGATAAAGAAATTGTTGATGGAGTTTTAGCCCTAAAAAAGGGAGAGGATGTTTATGATGGAATACCCACTC
TTGTAAAAAATTCAGAGGAACTTATAGAAACTTGCGGTTCTTTACATTGTGCCCCAACAAACTTTGGAAATATTATAAGT
AAACATTTAAATGATTTGAAATTAGCAGTAGCTGTAAAACCATGTGATGCCATGGCCATAAATGAGCTCCAAAAAAGACA
GCAAATAGATAAAGACAATATCTATACAATAGGTTTAAATTGTGGTGGAACAATTCCCCCAATTACTGCAAGAAAAATGA
TTGAGATGTTTTATGGCGTAAATCCTGAAGATGTTATCAAGGAAGAGATAGATAGTGGTAAATTCATAATAGAATTAAAG
GATGGAACCCATAAAGCCATTAAAATGCATGATTTAGAAGATAAAGGATTTGGAAGGAGAAAAAACTGCCAGAGATGCGA
ATTAAAAATTCCAAGAAATGCAGATCTTGCATGTGGAAACTGGGGGGCAGAAGATGGATGGACTTTTGTTGAAGCATGTT
CAGAAAAAGGAAAAGAATTAATTGAAAATGCTGAAAAAGAAGGATATATTATGGTTAAAACCCCTTCTGAAAAAGGTATT
AAAATTAGGGGAAAAATTGAAAAAATTATGATTGGTCTTGCCAAATCCGCCCAGAAGGAACAACTTGAAGAGAAATACTA
TTCCCCCGAAAAATGGAAAGAATATTGGAGCAGATGTATAAAATGCTATGGTTGTAGAGATGCTTGCCCACTATGTTTCT
GTAAGGAGTGTGCTTTAAGTCAAGATTACATGGACAAAGGGGAAATTCCACCGGACCCGATAATGTTCCAAGGTATCAGA
CTATCCCACATGAGTTTTAGCTGTATAAACTGCGGTCAATGTGAAGATGTATGTCCAATAGAGATCCCAGTGGCCCATAT
TTATCATAGGACCCAATTAAAAATAAGAAAAACAACAAACTTTATTCCTGGTGTAGATGACAGCATGCCATTTTTATACC
AATAA

Upstream 100 bases:

>100_bases
ACTGTAAGATACCAGAATTTAAAGTATGTGCAGTTAAAATTGATAAACAATAATCATATAAATTTTTTTATTTTTTTATA
TATTCGAAATGGTGATGACC

Downstream 100 bases:

>100_bases
TTCTTTATTTTTTTATAATTATTTTATGCTCATTTCTAATTTCCCACATGCTTGTTAATAATTTTGTTTTAATATATGTT
TTTATTGCCAATTTTTCCAA

Product: coenzyme F420 hydrogenase/dehydrogenase beta subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MKYLIQSTDENILKHAECGGAVSALFKYLLDKEIVDGVLALKKGEDVYDGIPTLVKNSEELIETCGSLHCAPTNFGNIIS
KHLNDLKLAVAVKPCDAMAINELQKRQQIDKDNIYTIGLNCGGTIPPITARKMIEMFYGVNPEDVIKEEIDSGKFIIELK
DGTHKAIKMHDLEDKGFGRRKNCQRCELKIPRNADLACGNWGAEDGWTFVEACSEKGKELIENAEKEGYIMVKTPSEKGI
KIRGKIEKIMIGLAKSAQKEQLEEKYYSPEKWKEYWSRCIKCYGCRDACPLCFCKECALSQDYMDKGEIPPDPIMFQGIR
LSHMSFSCINCGQCEDVCPIEIPVAHIYHRTQLKIRKTTNFIPGVDDSMPFLYQ

Sequences:

>Translated_374_residues
MKYLIQSTDENILKHAECGGAVSALFKYLLDKEIVDGVLALKKGEDVYDGIPTLVKNSEELIETCGSLHCAPTNFGNIIS
KHLNDLKLAVAVKPCDAMAINELQKRQQIDKDNIYTIGLNCGGTIPPITARKMIEMFYGVNPEDVIKEEIDSGKFIIELK
DGTHKAIKMHDLEDKGFGRRKNCQRCELKIPRNADLACGNWGAEDGWTFVEACSEKGKELIENAEKEGYIMVKTPSEKGI
KIRGKIEKIMIGLAKSAQKEQLEEKYYSPEKWKEYWSRCIKCYGCRDACPLCFCKECALSQDYMDKGEIPPDPIMFQGIR
LSHMSFSCINCGQCEDVCPIEIPVAHIYHRTQLKIRKTTNFIPGVDDSMPFLYQ
>Mature_374_residues
MKYLIQSTDENILKHAECGGAVSALFKYLLDKEIVDGVLALKKGEDVYDGIPTLVKNSEELIETCGSLHCAPTNFGNIIS
KHLNDLKLAVAVKPCDAMAINELQKRQQIDKDNIYTIGLNCGGTIPPITARKMIEMFYGVNPEDVIKEEIDSGKFIIELK
DGTHKAIKMHDLEDKGFGRRKNCQRCELKIPRNADLACGNWGAEDGWTFVEACSEKGKELIENAEKEGYIMVKTPSEKGI
KIRGKIEKIMIGLAKSAQKEQLEEKYYSPEKWKEYWSRCIKCYGCRDACPLCFCKECALSQDYMDKGEIPPDPIMFQGIR
LSHMSFSCINCGQCEDVCPIEIPVAHIYHRTQLKIRKTTNFIPGVDDSMPFLYQ

Specific function: Catalyzes the oxidation of formate [H]

COG id: COG1035

COG function: function code C; Coenzyme F420-reducing hydrogenase, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR007516
- InterPro:   IPR007525
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF04432 FrhB_FdhB_C; PF04422 FrhB_FdhB_N [H]

EC number: =1.2.1.2 [H]

Molecular weight: Translated: 42215; Mature: 42215

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLIQSTDENILKHAECGGAVSALFKYLLDKEIVDGVLALKKGEDVYDGIPTLVKNSEE
CCCEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHCCCHH
LIETCGSLHCAPTNFGNIISKHLNDLKLAVAVKPCDAMAINELQKRQQIDKDNIYTIGLN
HHHHHCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEC
CGGTIPPITARKMIEMFYGVNPEDVIKEEIDSGKFIIELKDGTHKAIKMHDLEDKGFGRR
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCCCCCC
KNCQRCELKIPRNADLACGNWGAEDGWTFVEACSEKGKELIENAEKEGYIMVKTPSEKGI
CCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
KIRGKIEKIMIGLAKSAQKEQLEEKYYSPEKWKEYWSRCIKCYGCRDACPLCFCKECALS
EEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC
QDYMDKGEIPPDPIMFQGIRLSHMSFSCINCGQCEDVCPIEIPVAHIYHRTQLKIRKTTN
HHHHCCCCCCCCCCEECCEEEECCEEECCCCCCCCCCCCCCCHHHHHHHHHHEEEEECCC
FIPGVDDSMPFLYQ
CCCCCCCCCCCCCC
>Mature Secondary Structure
MKYLIQSTDENILKHAECGGAVSALFKYLLDKEIVDGVLALKKGEDVYDGIPTLVKNSEE
CCCEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHCCCHH
LIETCGSLHCAPTNFGNIISKHLNDLKLAVAVKPCDAMAINELQKRQQIDKDNIYTIGLN
HHHHHCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEC
CGGTIPPITARKMIEMFYGVNPEDVIKEEIDSGKFIIELKDGTHKAIKMHDLEDKGFGRR
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCCCCCC
KNCQRCELKIPRNADLACGNWGAEDGWTFVEACSEKGKELIENAEKEGYIMVKTPSEKGI
CCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
KIRGKIEKIMIGLAKSAQKEQLEEKYYSPEKWKEYWSRCIKCYGCRDACPLCFCKECALS
EEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC
QDYMDKGEIPPDPIMFQGIRLSHMSFSCINCGQCEDVCPIEIPVAHIYHRTQLKIRKTTN
HHHHCCCCCCCCCCEECCEEEECCEEECCCCCCCCCCCCCCCHHHHHHHHHHEEEEECCC
FIPGVDDSMPFLYQ
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]