| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150400956
Identifier: 150400956
GI number: 150400956
Start: 544513
End: 545058
Strand: Reverse
Name: 150400956
Synonym: Maeo_0524
Alternate gene names: NA
Gene position: 545058-544513 (Counterclockwise)
Preceding gene: 150400957
Following gene: 150400955
Centisome position: 34.73
GC content: 22.89
Gene sequence:
>546_bases ATGAGAACAATTAAAAACAAATTTTGTATATTTATGTCTCTATCATGTATAATAATAGGCGTATTATGTGGAATATATAT CAATCAACAACCAACCAATTCAAATTTAGAAAATAATAATCTTCTAAAACATCAGAAAATATCAAATTTGGAAGAATTTA TCTTAATATTAAAAAATAACTTAAAAGTATATTTAATGCTTTTATTAGGCTCGTTAACATTTGGATTATCAACATTTTAT ATATTATTCTTTAATGGATTATCAATTCCAATATTACTTTCAAATGTAAAACTAATCGATATTGTTGCTTATGTTATACC TCATGCAATTTTTGAATTTTTAGGGTTTATTATTGCAGGAGCAGTTGGCTTTAAAATTCCTTATGAAATAACTCTTTATC TCTTAGATAAGAAAGAAAAACCAATAACAGAAGAAGATATAAAAGAATTCTTAAAATTGGCACTAATTTCAATAGTATTA ATAATTATAGCAGCTTTCGTAGAGGTTTATATTACTCCAGAAATAGCAAATTATTTATTAACATAA
Upstream 100 bases:
>100_bases ATAATTTTTATTACTAGTTTATTAACGGTTGTAGCAATTATTTTATATGTATTTTATATGTAGGAGTAGTATCAAATAGT AATTTTTGTTGAGGCACAAT
Downstream 100 bases:
>100_bases TTATATTAACATAATATTTAAATATAACTAAATACCAATTAATTATTAAAAAAATAAAGAGGGGAGAAAATGAACCTAAA AGAACTAATCTTAAATCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MRTIKNKFCIFMSLSCIIIGVLCGIYINQQPTNSNLENNNLLKHQKISNLEEFILILKNNLKVYLMLLLGSLTFGLSTFY ILFFNGLSIPILLSNVKLIDIVAYVIPHAIFEFLGFIIAGAVGFKIPYEITLYLLDKKEKPITEEDIKEFLKLALISIVL IIIAAFVEVYITPEIANYLLT
Sequences:
>Translated_181_residues MRTIKNKFCIFMSLSCIIIGVLCGIYINQQPTNSNLENNNLLKHQKISNLEEFILILKNNLKVYLMLLLGSLTFGLSTFY ILFFNGLSIPILLSNVKLIDIVAYVIPHAIFEFLGFIIAGAVGFKIPYEITLYLLDKKEKPITEEDIKEFLKLALISIVL IIIAAFVEVYITPEIANYLLT >Mature_181_residues MRTIKNKFCIFMSLSCIIIGVLCGIYINQQPTNSNLENNNLLKHQKISNLEEFILILKNNLKVYLMLLLGSLTFGLSTFY ILFFNGLSIPILLSNVKLIDIVAYVIPHAIFEFLGFIIAGAVGFKIPYEITLYLLDKKEKPITEEDIKEFLKLALISIVL IIIAAFVEVYITPEIANYLLT
Specific function: Unknown
COG id: COG1300
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0706 and Synechocystis PCC 6803 slr1478 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002798 [H]
Pfam domain/function: PF01944 DUF95 [H]
EC number: NA
Molecular weight: Translated: 20552; Mature: 20552
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTIKNKFCIFMSLSCIIIGVLCGIYINQQPTNSNLENNNLLKHQKISNLEEFILILKNN CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC LKVYLMLLLGSLTFGLSTFYILFFNGLSIPILLSNVKLIDIVAYVIPHAIFEFLGFIIAG HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH AVGFKIPYEITLYLLDKKEKPITEEDIKEFLKLALISIVLIIIAAFVEVYITPEIANYLL HHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC T C >Mature Secondary Structure MRTIKNKFCIFMSLSCIIIGVLCGIYINQQPTNSNLENNNLLKHQKISNLEEFILILKNN CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC LKVYLMLLLGSLTFGLSTFYILFFNGLSIPILLSNVKLIDIVAYVIPHAIFEFLGFIIAG HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH AVGFKIPYEITLYLLDKKEKPITEEDIKEFLKLALISIVLIIIAAFVEVYITPEIANYLL HHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC T C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]