Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is 150400955

Identifier: 150400955

GI number: 150400955

Start: 543790

End: 544443

Strand: Reverse

Name: 150400955

Synonym: Maeo_0523

Alternate gene names: NA

Gene position: 544443-543790 (Counterclockwise)

Preceding gene: 150400956

Following gene: 150400954

Centisome position: 34.69

GC content: 31.04

Gene sequence:

>654_bases
ATGAACCTAAAAGAACTAATCTTAAATCCAAACGATTTTTTCAAATATCTATTAAATAAAGAAGTATCTCTCAAAACACC
TTTTCTCATAGTTCTTATATTCTCAGTGTTAATGTCGGCATATTCTTACTATACAACATCAATAATGTTTAAAATATTTC
CATCAGATATGCAAGGTATGATGTCAATGATGATAATAATTACCGCAGTATCTTCGCTAGTAGGAGGATTTATATCATGG
TTATTAATAGCCGCAGTTATGCATATAATTTCAATGGCATTCAAAGGAGTGGGCTCATTTAAAAGAACATTCGAATTTAC
GGGCTATGGATTCATAGCAAACTTAATTGCTCTATGTATTACCATACCAATTGGTTATTATTTTCTTTCAAGTGCTCATA
TTACAACATTAACAGTAGCACAGCTCCAAAATCCAGCAGTTGTAAAACAGGTGATGTCTTCAATACTTCCAAAAACAATG
ATATATACAAATCTTTTAGTAGGTATTGCAGTTAGTTTGTGGAATTTGAGCTTATGGACTTATGGAATAAAATATGCAAG
GAATTTGGAGTTAAAGAAAGCATTTATAGTTGCATTAATTCCAACAGTATTATTTGGGGCATACCAGCTATACAGTGTGG
CTAAATTCTTATAA

Upstream 100 bases:

>100_bases
TCCAGAAATAGCAAATTATTTATTAACATAATTATATTAACATAATATTTAAATATAACTAAATACCAATTAATTATTAA
AAAAATAAAGAGGGGAGAAA

Downstream 100 bases:

>100_bases
GGTGAAATAATGAAAAAATCTTTTTTTATTTTTTTATCCATTTTATCTTTATTTTTAATTTTAAATACATTAAATGCGGT
GGAATTTACAAGCATTGACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MNLKELILNPNDFFKYLLNKEVSLKTPFLIVLIFSVLMSAYSYYTTSIMFKIFPSDMQGMMSMMIIITAVSSLVGGFISW
LLIAAVMHIISMAFKGVGSFKRTFEFTGYGFIANLIALCITIPIGYYFLSSAHITTLTVAQLQNPAVVKQVMSSILPKTM
IYTNLLVGIAVSLWNLSLWTYGIKYARNLELKKAFIVALIPTVLFGAYQLYSVAKFL

Sequences:

>Translated_217_residues
MNLKELILNPNDFFKYLLNKEVSLKTPFLIVLIFSVLMSAYSYYTTSIMFKIFPSDMQGMMSMMIIITAVSSLVGGFISW
LLIAAVMHIISMAFKGVGSFKRTFEFTGYGFIANLIALCITIPIGYYFLSSAHITTLTVAQLQNPAVVKQVMSSILPKTM
IYTNLLVGIAVSLWNLSLWTYGIKYARNLELKKAFIVALIPTVLFGAYQLYSVAKFL
>Mature_217_residues
MNLKELILNPNDFFKYLLNKEVSLKTPFLIVLIFSVLMSAYSYYTTSIMFKIFPSDMQGMMSMMIIITAVSSLVGGFISW
LLIAAVMHIISMAFKGVGSFKRTFEFTGYGFIANLIALCITIPIGYYFLSSAHITTLTVAQLQNPAVVKQVMSSILPKTM
IYTNLLVGIAVSLWNLSLWTYGIKYARNLELKKAFIVALIPTVLFGAYQLYSVAKFL

Specific function: Unknown

COG id: COG2881

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006977 [H]

Pfam domain/function: PF04893 Yip1 [H]

EC number: NA

Molecular weight: Translated: 24333; Mature: 24333

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKELILNPNDFFKYLLNKEVSLKTPFLIVLIFSVLMSAYSYYTTSIMFKIFPSDMQGM
CCHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
MSMMIIITAVSSLVGGFISWLLIAAVMHIISMAFKGVGSFKRTFEFTGYGFIANLIALCI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHH
TIPIGYYFLSSAHITTLTVAQLQNPAVVKQVMSSILPKTMIYTNLLVGIAVSLWNLSLWT
HHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGIKYARNLELKKAFIVALIPTVLFGAYQLYSVAKFL
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MNLKELILNPNDFFKYLLNKEVSLKTPFLIVLIFSVLMSAYSYYTTSIMFKIFPSDMQGM
CCHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
MSMMIIITAVSSLVGGFISWLLIAAVMHIISMAFKGVGSFKRTFEFTGYGFIANLIALCI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHH
TIPIGYYFLSSAHITTLTVAQLQNPAVVKQVMSSILPKTMIYTNLLVGIAVSLWNLSLWT
HHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGIKYARNLELKKAFIVALIPTVLFGAYQLYSVAKFL
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]