| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is ycgO [C]
Identifier: 150400915
GI number: 150400915
Start: 505625
End: 506884
Strand: Direct
Name: ycgO [C]
Synonym: Maeo_0483
Alternate gene names: 150400915
Gene position: 505625-506884 (Clockwise)
Preceding gene: 150400907
Following gene: 150400916
Centisome position: 32.22
GC content: 34.05
Gene sequence:
>1260_bases ATGGATTTAGCCATTGCCATAGGGTATTTAGCACTGTTGTTTATTTCTGGTTCAATTATCGCTAAAATCGGAGAGAAATT AAAACTTCCAGATATACCATTATTGTTAATATTTGGGTTAATAGCGGGACCTTTTTTAGGCATAATATCCACAGCAGACG CCCAAAATATATTTGAATATGTAGCAAATATTGGATTAATAGTATTGTTATTAGGTGGGGCTCTTGACATGAGGTGGATT GTCTTAAAGAGAGTGTTAAACACAGTTTTAAAGTTAGATGTTATTGGATTAATCGGTGTTTTTGGAATTTCAGGATTATT ATTTAATTTTATTTTTAAAATACCATTATTTAGTCCAATTGGTTATTTATATGGTGCTATTGTATGTGCCACCGACCCAG CTACACTTATGCCAGTATTTTCAAAATCAAAAATTGACCCAAAAATAGCTTTAACTCTTGAAGCAGAAAGTGTATTTAAT GACCCATTGGGTATTGTAGTTACAACTATAATGTTATCTACGCTAGGTCTTGCAGAGAATTTAAACCCTATTTTGAATTT CATAACTCTTGCAATCGGTGGAGTAGTATTGGGGATAATAGGGGGGAAAATATTTGAAAAAACAGTATTAAAATGTGATT TTAAAGAGTTTGTAGCTCCATTAGGTATTGGGTTATCATTATTGTTGTGGTATTTTGGTGAAGAGCTATTTCCATTATTG TCCTCAGGATACGAAATTAGCGGTTTTATGGCTGTTGCAATAATGGGATTATATTTGGGAAATACACTCACAAAATATGA AAAACAGTCAAAATATATTGAGGAAATTGATGAATTTTGTAGTATGTTATCTACTTTATTTAGGGTATTGATATTTGTAT TTTTAGGTGCAAGTATAAGTTTATCGGTATTATCTGAATACTGGATTTTAGGATTATTATGTGCGTTGGGCTCAATATTC ATTGGAAGACCATTGGGAGTATTTGCTGCTACCTCAATACCGCCTGCAAGTGATATTAAAGAAAGAATATATTATTCATT GGAAGGTCCAAGGGGCGTAGTTCCTGCGGCACTATCTGCCACCATCTATTCTTTAATAATGACTCACCCCGATGCAATTC CTAGTGCCATCACAGCATACATAGCCCCAGATGCAATAGCTGGTTCAATACTTGTTGCTACCTTTATGACAATACTGTTA AGTGTGGTTTTAGAGGCATCGTGGGCGGAGCTCCTGGGAAAAAAACTATTCAAATATTAA
Upstream 100 bases:
>100_bases TTATACAATATCTAAACCATTTAAAATGGACATAATATTTAGTTAAGCAATGATAATAATATACAAATAATATACAAATT ATTTTTATGAAGGTGTTTTA
Downstream 100 bases:
>100_bases ATACATTAAATAATTTATTTTTTTTATCTTTATTTTTATTTTTATTTTTTTATTACATACATCGGTGATTAAATGAAGTT GGACAAATCAAAGCAAAAGG
Product: sodium/hydrogen exchanger
Products: NA
Alternate protein names: MjNhaP2 [H]
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MDLAIAIGYLALLFISGSIIAKIGEKLKLPDIPLLLIFGLIAGPFLGIISTADAQNIFEYVANIGLIVLLLGGALDMRWI VLKRVLNTVLKLDVIGLIGVFGISGLLFNFIFKIPLFSPIGYLYGAIVCATDPATLMPVFSKSKIDPKIALTLEAESVFN DPLGIVVTTIMLSTLGLAENLNPILNFITLAIGGVVLGIIGGKIFEKTVLKCDFKEFVAPLGIGLSLLLWYFGEELFPLL SSGYEISGFMAVAIMGLYLGNTLTKYEKQSKYIEEIDEFCSMLSTLFRVLIFVFLGASISLSVLSEYWILGLLCALGSIF IGRPLGVFAATSIPPASDIKERIYYSLEGPRGVVPAALSATIYSLIMTHPDAIPSAITAYIAPDAIAGSILVATFMTILL SVVLEASWAELLGKKLFKY
Sequences:
>Translated_419_residues MDLAIAIGYLALLFISGSIIAKIGEKLKLPDIPLLLIFGLIAGPFLGIISTADAQNIFEYVANIGLIVLLLGGALDMRWI VLKRVLNTVLKLDVIGLIGVFGISGLLFNFIFKIPLFSPIGYLYGAIVCATDPATLMPVFSKSKIDPKIALTLEAESVFN DPLGIVVTTIMLSTLGLAENLNPILNFITLAIGGVVLGIIGGKIFEKTVLKCDFKEFVAPLGIGLSLLLWYFGEELFPLL SSGYEISGFMAVAIMGLYLGNTLTKYEKQSKYIEEIDEFCSMLSTLFRVLIFVFLGASISLSVLSEYWILGLLCALGSIF IGRPLGVFAATSIPPASDIKERIYYSLEGPRGVVPAALSATIYSLIMTHPDAIPSAITAYIAPDAIAGSILVATFMTILL SVVLEASWAELLGKKLFKY >Mature_419_residues MDLAIAIGYLALLFISGSIIAKIGEKLKLPDIPLLLIFGLIAGPFLGIISTADAQNIFEYVANIGLIVLLLGGALDMRWI VLKRVLNTVLKLDVIGLIGVFGISGLLFNFIFKIPLFSPIGYLYGAIVCATDPATLMPVFSKSKIDPKIALTLEAESVFN DPLGIVVTTIMLSTLGLAENLNPILNFITLAIGGVVLGIIGGKIFEKTVLKCDFKEFVAPLGIGLSLLLWYFGEELFPLL SSGYEISGFMAVAIMGLYLGNTLTKYEKQSKYIEEIDEFCSMLSTLFRVLIFVFLGASISLSVLSEYWILGLLCALGSIF IGRPLGVFAATSIPPASDIKERIYYSLEGPRGVVPAALSATIYSLIMTHPDAIPSAITAYIAPDAIAGSILVATFMTILL SVVLEASWAELLGKKLFKY
Specific function: This is probably a Na(+)/H(+) antiporter [H]
COG id: COG0025
COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family [H]
Homologues:
Organism=Homo sapiens, GI15529998, Length=356, Percent_Identity=26.685393258427, Blast_Score=71, Evalue=2e-12, Organism=Escherichia coli, GI87081854, Length=335, Percent_Identity=26.865671641791, Blast_Score=77, Evalue=3e-15, Organism=Drosophila melanogaster, GI221510740, Length=299, Percent_Identity=23.7458193979933, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24585580, Length=299, Percent_Identity=23.7458193979933, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24585578, Length=299, Percent_Identity=23.7458193979933, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: NA
Molecular weight: Translated: 45087; Mature: 45087
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLAIAIGYLALLFISGSIIAKIGEKLKLPDIPLLLIFGLIAGPFLGIISTADAQNIFEY CCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH VANIGLIVLLLGGALDMRWIVLKRVLNTVLKLDVIGLIGVFGISGLLFNFIFKIPLFSPI HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GYLYGAIVCATDPATLMPVFSKSKIDPKIALTLEAESVFNDPLGIVVTTIMLSTLGLAEN HHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHH LNPILNFITLAIGGVVLGIIGGKIFEKTVLKCDFKEFVAPLGIGLSLLLWYFGEELFPLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SSGYEISGFMAVAIMGLYLGNTLTKYEKQSKYIEEIDEFCSMLSTLFRVLIFVFLGASIS HCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LSVLSEYWILGLLCALGSIFIGRPLGVFAATSIPPASDIKERIYYSLEGPRGVVPAALSA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHEECCCCCCCHHHHHHH TIYSLIMTHPDAIPSAITAYIAPDAIAGSILVATFMTILLSVVLEASWAELLGKKLFKY HHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDLAIAIGYLALLFISGSIIAKIGEKLKLPDIPLLLIFGLIAGPFLGIISTADAQNIFEY CCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH VANIGLIVLLLGGALDMRWIVLKRVLNTVLKLDVIGLIGVFGISGLLFNFIFKIPLFSPI HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GYLYGAIVCATDPATLMPVFSKSKIDPKIALTLEAESVFNDPLGIVVTTIMLSTLGLAEN HHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHH LNPILNFITLAIGGVVLGIIGGKIFEKTVLKCDFKEFVAPLGIGLSLLLWYFGEELFPLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SSGYEISGFMAVAIMGLYLGNTLTKYEKQSKYIEEIDEFCSMLSTLFRVLIFVFLGASIS HCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LSVLSEYWILGLLCALGSIFIGRPLGVFAATSIPPASDIKERIYYSLEGPRGVVPAALSA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHEECCCCCCCHHHHHHH TIYSLIMTHPDAIPSAITAYIAPDAIAGSILVATFMTILLSVVLEASWAELLGKKLFKY HHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]