| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is cdhA [H]
Identifier: 150400907
GI number: 150400907
Start: 497073
End: 499379
Strand: Direct
Name: cdhA [H]
Synonym: Maeo_0475
Alternate gene names: 150400907
Gene position: 497073-499379 (Clockwise)
Preceding gene: 150400902
Following gene: 150400915
Centisome position: 31.67
GC content: 35.02
Gene sequence:
>2307_bases ATGTTTCGGGTTGACGGATATAAAAGCAAAAATGTTTCAATTAAAGGATTGAAAATGGATTTTAAAAAAATAAATTTAGA TACTGAACATACAAACACAAATTATCCTCCTTCTAAAAATAAAAAAGTTAGTGTAGATTACTCAAAACTTAGGGAGTGGG ATTTTAAGTTATTGTCTTATTTTAAACCATTTTATGCTCCATTGTGTAATTTATGTTGTCTATGTACATATGGAAAATGT GATTTATCCAAAAATAAAAAAGGAGGATGCGGTATTAATTTAGAAAAACAACAGGCAAGAATTGTATTATTGGCATGCTG TATTGGGGCATCTACTCATGCCGCCCATGCTAGACATATTGTTGACCACATATTGGAGGAAAATCCAAATTTAAAAATAG ATTATGGAAATGCCATAAATATAGTTGCACCTTTATCAACTACCATTACAGGCATCACTCCAAAAACTGCTGATGATTTA GATAAAATATTGGTGTATGTTGAAAGGGAAATAACAAACTTACTGGCTGCCACCCATACAGGTCAAGAGGGTAGTTATTT AGATTTTGAATCAAAAGCTCTTCATGCGGGAATGATTGATAATTTAGCCTTGGAAATAGCAGAATTGGCACAAATAAATT ATTATAATTTACATAAGGGTGAGCCCAATACTCCATTAATAGATATTGGATTGGGAGTAATAGATGACCAAAAGCCAATA ATATTGTGCATTGGACACAATATAGCACCAGGAGTAGAAATTATTGATTATATTGATGACATGGATTTATCTGAGGATAT AGAAGTATGTGGTTTGTGTTGCACTGCAATAGATATCAGTAGATACTCAAAGGAATCAAAAATAGTTGGTCCAATATCGA GGCAATTGATGTTTATAAAATCGGGTATTCCAGATATAGTGGTTTTGGACGAACAATGTATAAGGGCAGATATATTAGAA CTATGTGCTGAACAAAATATTCCCATAATTGCAACAAGCGACAAATGTTCATTGGGATTGATTGAAATGACATCCAAAGA CGAAAATATTATTATTCATGAGCTATTATCAAATAAACATAAAGGTGCCCTTATAAAAGATATGGCGAAAGTTGGAAAGG TTGCCGTTGGTTTAGCCTTACTGTTAAAGAAAAACCAAAAACCCAAACAGGAACATAGAAACATAGATATTTCTGAACTT ATAAATGGATGCACAGAATGTGAATGGTGCAACAGGGTATGTCCTGCCATGCTCCCAATAAAAGAAGCTTTTGTACTGGG TAAAAACGGGGATTTATCCGGGTTTTCAGCCCTTTATGGTATGTGTGTAGGATGTGGAAAATGTATGGGGGAATGTGAGA GGGAGCTCCCAATAATAGATATTATAAGAATAGCTTCAAAAGATAAAATAGCTTCCGAAAGATTTAAAATTAGAGCGGGG AGGGGACCAATTCAAGATATTGAAATAAGAAAAGTGGGAGCTCCCATTGTATTGGGCGATATTCCTGGAGTTATTGTACT TGCAGGTTGTTCCAACTACCATAATGGAGAAAATGAAATAGCCCTTATTACAGAAGAATTTTTAAAAAGAGGGTATATTG TAGTGGCTGCGGGATGTGTGGCCATGGACATAGGACTTTATATGGATAAAGACGGAAAAACACTTTACGAAAAATTCTCT GGCGACTTTGACAAAGGGGGACTTCTAAATGTAGGTCCATGCGTTGCAAATGCTCATGCCATCGGTAGTGCCATCAAAAT AGCAAATATATTTGCAAAAATACCCCTTGAAAATAATTTTACAAATGTAGCAGACTATATATTAAACAGGGTCGGGGCAT GCGTAATTGCATGGGGTGCCATGAGTCAGAAGGCAGTAGCAATTGCAACCGGCGCGAATAGGTGGGGCATACCTGCTGTG GTTGGGCCTCATTCATCCAAATACAGAAGATTGTATTTAGGAGAATCAGAATTAAGAGAAATTACCGATAAACGAACAAA TGAAAAGGTGAAATGCGAACCCGCCCCGTTGCACTTAATATATTGTGCTGAAAGTATGAATGAATGTATGGCAATGGTGG CAAAATCTTGCATAAGGCCTAATGATACCCCAAAAGGAAGATTAATAAAATTAACTCATTATGTGGACATATATAAAAAA TACTATGGGTGCCTACCAGATGATTTACACTTATATATTAGAAATGAAAGGGAAATTCCTTATGAAGATAAAAAAGAAAT ATTAAAATTCCTTAAAGAAAAAGAATGGAATCCAAGAAATGCTCCAAATGAACCTTCCATATTGTAG
Upstream 100 bases:
>100_bases GGATTCCATGCAGACATAATATCACCACAAGATTTATATATTGTGTGTATTAATTACACATATATAATGATTAATAATGA TATTATATAAAGGTGAGGGT
Downstream 100 bases:
>100_bases AGGGCGTGGCTAATTAATCTAACTCTCCTCTATTATCCTTAATTATTTTTAAAAATATTGCATTTTTTTGGCATAATTCT TGACATAACTCACATCCACA
Product: acetyl-CoA decarbonylase/synthase complex subunit alpha
Products: NA
Alternate protein names: ACDS complex subunit alpha; ACDS complex carbon monoxide dehydrogenase; ACDS CODH [H]
Number of amino acids: Translated: 768; Mature: 768
Protein sequence:
>768_residues MFRVDGYKSKNVSIKGLKMDFKKINLDTEHTNTNYPPSKNKKVSVDYSKLREWDFKLLSYFKPFYAPLCNLCCLCTYGKC DLSKNKKGGCGINLEKQQARIVLLACCIGASTHAAHARHIVDHILEENPNLKIDYGNAINIVAPLSTTITGITPKTADDL DKILVYVEREITNLLAATHTGQEGSYLDFESKALHAGMIDNLALEIAELAQINYYNLHKGEPNTPLIDIGLGVIDDQKPI ILCIGHNIAPGVEIIDYIDDMDLSEDIEVCGLCCTAIDISRYSKESKIVGPISRQLMFIKSGIPDIVVLDEQCIRADILE LCAEQNIPIIATSDKCSLGLIEMTSKDENIIIHELLSNKHKGALIKDMAKVGKVAVGLALLLKKNQKPKQEHRNIDISEL INGCTECEWCNRVCPAMLPIKEAFVLGKNGDLSGFSALYGMCVGCGKCMGECERELPIIDIIRIASKDKIASERFKIRAG RGPIQDIEIRKVGAPIVLGDIPGVIVLAGCSNYHNGENEIALITEEFLKRGYIVVAAGCVAMDIGLYMDKDGKTLYEKFS GDFDKGGLLNVGPCVANAHAIGSAIKIANIFAKIPLENNFTNVADYILNRVGACVIAWGAMSQKAVAIATGANRWGIPAV VGPHSSKYRRLYLGESELREITDKRTNEKVKCEPAPLHLIYCAESMNECMAMVAKSCIRPNDTPKGRLIKLTHYVDIYKK YYGCLPDDLHLYIRNEREIPYEDKKEILKFLKEKEWNPRNAPNEPSIL
Sequences:
>Translated_768_residues MFRVDGYKSKNVSIKGLKMDFKKINLDTEHTNTNYPPSKNKKVSVDYSKLREWDFKLLSYFKPFYAPLCNLCCLCTYGKC DLSKNKKGGCGINLEKQQARIVLLACCIGASTHAAHARHIVDHILEENPNLKIDYGNAINIVAPLSTTITGITPKTADDL DKILVYVEREITNLLAATHTGQEGSYLDFESKALHAGMIDNLALEIAELAQINYYNLHKGEPNTPLIDIGLGVIDDQKPI ILCIGHNIAPGVEIIDYIDDMDLSEDIEVCGLCCTAIDISRYSKESKIVGPISRQLMFIKSGIPDIVVLDEQCIRADILE LCAEQNIPIIATSDKCSLGLIEMTSKDENIIIHELLSNKHKGALIKDMAKVGKVAVGLALLLKKNQKPKQEHRNIDISEL INGCTECEWCNRVCPAMLPIKEAFVLGKNGDLSGFSALYGMCVGCGKCMGECERELPIIDIIRIASKDKIASERFKIRAG RGPIQDIEIRKVGAPIVLGDIPGVIVLAGCSNYHNGENEIALITEEFLKRGYIVVAAGCVAMDIGLYMDKDGKTLYEKFS GDFDKGGLLNVGPCVANAHAIGSAIKIANIFAKIPLENNFTNVADYILNRVGACVIAWGAMSQKAVAIATGANRWGIPAV VGPHSSKYRRLYLGESELREITDKRTNEKVKCEPAPLHLIYCAESMNECMAMVAKSCIRPNDTPKGRLIKLTHYVDIYKK YYGCLPDDLHLYIRNEREIPYEDKKEILKFLKEKEWNPRNAPNEPSIL >Mature_768_residues MFRVDGYKSKNVSIKGLKMDFKKINLDTEHTNTNYPPSKNKKVSVDYSKLREWDFKLLSYFKPFYAPLCNLCCLCTYGKC DLSKNKKGGCGINLEKQQARIVLLACCIGASTHAAHARHIVDHILEENPNLKIDYGNAINIVAPLSTTITGITPKTADDL DKILVYVEREITNLLAATHTGQEGSYLDFESKALHAGMIDNLALEIAELAQINYYNLHKGEPNTPLIDIGLGVIDDQKPI ILCIGHNIAPGVEIIDYIDDMDLSEDIEVCGLCCTAIDISRYSKESKIVGPISRQLMFIKSGIPDIVVLDEQCIRADILE LCAEQNIPIIATSDKCSLGLIEMTSKDENIIIHELLSNKHKGALIKDMAKVGKVAVGLALLLKKNQKPKQEHRNIDISEL INGCTECEWCNRVCPAMLPIKEAFVLGKNGDLSGFSALYGMCVGCGKCMGECERELPIIDIIRIASKDKIASERFKIRAG RGPIQDIEIRKVGAPIVLGDIPGVIVLAGCSNYHNGENEIALITEEFLKRGYIVVAAGCVAMDIGLYMDKDGKTLYEKFS GDFDKGGLLNVGPCVANAHAIGSAIKIANIFAKIPLENNFTNVADYILNRVGACVIAWGAMSQKAVAIATGANRWGIPAV VGPHSSKYRRLYLGESELREITDKRTNEKVKCEPAPLHLIYCAESMNECMAMVAKSCIRPNDTPKGRLIKLTHYVDIYKK YYGCLPDDLHLYIRNEREIPYEDKKEILKFLKEKEWNPRNAPNEPSIL
Specific function: Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2) [H]
COG id: COG1152
COG function: function code C; CO dehydrogenase/acetyl-CoA synthase alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR004460 - InterPro: IPR012285 - InterPro: IPR004137 - InterPro: IPR011254 - InterPro: IPR016099 [H]
Pfam domain/function: PF03063 Prismane [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 85043; Mature: 85043
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRVDGYKSKNVSIKGLKMDFKKINLDTEHTNTNYPPSKNKKVSVDYSKLREWDFKLLSY CCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHH FKPFYAPLCNLCCLCTYGKCDLSKNKKGGCGINLEKQQARIVLLACCIGASTHAAHARHI HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHEEEEEECCCCCCHHHHHHHH VDHILEENPNLKIDYGNAINIVAPLSTTITGITPKTADDLDKILVYVEREITNLLAATHT HHHHHCCCCCEEEECCCEEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC GQEGSYLDFESKALHAGMIDNLALEIAELAQINYYNLHKGEPNTPLIDIGLGVIDDQKPI CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEECCCEECCCCCE ILCIGHNIAPGVEIIDYIDDMDLSEDIEVCGLCCTAIDISRYSKESKIVGPISRQLMFIK EEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHH SGIPDIVVLDEQCIRADILELCAEQNIPIIATSDKCSLGLIEMTSKDENIIIHELLSNKH CCCCCEEEECHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCEEHHHHHCCCC KGALIKDMAKVGKVAVGLALLLKKNQKPKQEHRNIDISELINGCTECEWCNRVCPAMLPI CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHCCCHHHHHHHCCHHCCC KEAFVLGKNGDLSGFSALYGMCVGCGKCMGECERELPIIDIIRIASKDKIASERFKIRAG HHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCCCHHCCCCEEEECC RGPIQDIEIRKVGAPIVLGDIPGVIVLAGCSNYHNGENEIALITEEFLKRGYIVVAAGCV CCCCCCEEEEECCCCEEEECCCCEEEEEECCCCCCCCCCEEEEEHHHHHCCEEEEEECHH AMDIGLYMDKDGKTLYEKFSGDFDKGGLLNVGPCVANAHAIGSAIKIANIFAKIPLENNF HEEECEEECCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCC TNVADYILNRVGACVIAWGAMSQKAVAIATGANRWGIPAVVGPHSSKYRRLYLGESELRE HHHHHHHHHHHCCEEEEECCCCCCEEEEEECCCCCCCCEEECCCCCCCEEEEECHHHHHH ITDKRTNEKVKCEPAPLHLIYCAESMNECMAMVAKSCIRPNDTPKGRLIKLTHYVDIYKK HHHHCCCCCEEECCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHH YYGCLPDDLHLYIRNEREIPYEDKKEILKFLKEKEWNPRNAPNEPSIL HHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MFRVDGYKSKNVSIKGLKMDFKKINLDTEHTNTNYPPSKNKKVSVDYSKLREWDFKLLSY CCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHH FKPFYAPLCNLCCLCTYGKCDLSKNKKGGCGINLEKQQARIVLLACCIGASTHAAHARHI HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHEEEEEECCCCCCHHHHHHHH VDHILEENPNLKIDYGNAINIVAPLSTTITGITPKTADDLDKILVYVEREITNLLAATHT HHHHHCCCCCEEEECCCEEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC GQEGSYLDFESKALHAGMIDNLALEIAELAQINYYNLHKGEPNTPLIDIGLGVIDDQKPI CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEECCCEECCCCCE ILCIGHNIAPGVEIIDYIDDMDLSEDIEVCGLCCTAIDISRYSKESKIVGPISRQLMFIK EEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHH SGIPDIVVLDEQCIRADILELCAEQNIPIIATSDKCSLGLIEMTSKDENIIIHELLSNKH CCCCCEEEECHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCEEHHHHHCCCC KGALIKDMAKVGKVAVGLALLLKKNQKPKQEHRNIDISELINGCTECEWCNRVCPAMLPI CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHCCCHHHHHHHCCHHCCC KEAFVLGKNGDLSGFSALYGMCVGCGKCMGECERELPIIDIIRIASKDKIASERFKIRAG HHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCCCHHCCCCEEEECC RGPIQDIEIRKVGAPIVLGDIPGVIVLAGCSNYHNGENEIALITEEFLKRGYIVVAAGCV CCCCCCEEEEECCCCEEEECCCCEEEEEECCCCCCCCCCEEEEEHHHHHCCEEEEEECHH AMDIGLYMDKDGKTLYEKFSGDFDKGGLLNVGPCVANAHAIGSAIKIANIFAKIPLENNF HEEECEEECCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCC TNVADYILNRVGACVIAWGAMSQKAVAIATGANRWGIPAVVGPHSSKYRRLYLGESELRE HHHHHHHHHHHCCEEEEECCCCCCEEEEEECCCCCCCCEEECCCCCCCEEEEECHHHHHH ITDKRTNEKVKCEPAPLHLIYCAESMNECMAMVAKSCIRPNDTPKGRLIKLTHYVDIYKK HHHHCCCCCEEECCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHH YYGCLPDDLHLYIRNEREIPYEDKKEILKFLKEKEWNPRNAPNEPSIL HHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]