| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is carB [H]
Identifier: 150400853
GI number: 150400853
Start: 440477
End: 441442
Strand: Direct
Name: carB [H]
Synonym: Maeo_0421
Alternate gene names: 150400853
Gene position: 440477-441442 (Clockwise)
Preceding gene: 150400852
Following gene: 150400854
Centisome position: 28.06
GC content: 29.3
Gene sequence:
>966_bases ATGGTAAAAATTTTAAGAACAGCAACTGGATGCATGGCATCGATTAGTTTTATCAATGAATTAATGAAAAAGGGTGTTGA GGTTGTATGTGTTGATGCAAATCCTATTTCTGTTGGATTACATTACTGTAGAAAGAAATATGTAGTTCCAAAAGGAAATG AACCAAATTTTATTCCCGAATTACTAAAAATTTGTAAAAAAGAAAATATAGATGCCATCTTATCAGGTCCAGAAGAAGAA ATTATACATATCTCAAAAAATAAAGATATTTTCTTAAATGAGGGAATTTTACCAATTGTATCCGATTATGAAACAATTAA AATAACATCCGATAAGTGGAAGACTTATGAATTTTTTATAAATAACAACATCTCAACTCCAAAAACATATAAATTAGATG AAATTAAAAAAGAAGAAATAAATTTCCCAATTGTCCTAAAACCAAGATTTGGTAGAGGGGGTCTGGGAATATACATCGCA AAAGATATGGGTGATTTTAATTACATTGTAAAGAAATGTAACTCAGATTATATTGCACAGGAGTTCATTGAGGGCATTGA ATTCACAATTGATATATTTTCAGATATGGATGGAAATATTTTGTCTGTTGTTCCAAGAAAACGGTTGTCAGTGGAATCAG GCATATCTGTAAAATCTGAGGTAACATACAATGAGACCATAATAAAATATGCAAAAGAAATTGCGGAAAAACTAAATATT AAAGGTCCTGCAAATATTCAATGCATTTTAAAAAATAATAAATCATATTTTATTGAAATAAATCCACGATTTGGTGGTGG CTCAATATTGTCAATAAGGAGTGACCCAACAATAATTGAAAATTTAATAAGAATTGTCAAAGGGGAAAAACCCATACCAA GCAAAGGTTTCAAACAAAACTTACTGATGTTAAGATACTACTCTGAAATTTTTGTTGAGGGGAAACATGAAAGCCATAAT ATTTGA
Upstream 100 bases:
>100_bases CAGGAACGGGGATTGAGCCAAAGTATTTAAATGAAATTATGGGGAAAAAGGTAAAAAGAGATATCAAAATAGATGAGATT TTAAAATTAGGTGATATAGA
Downstream 100 bases:
>100_bases TTTAGATAATACTCTTTATGATTATAGGGATTATTTCTATCAAGTTTTTTTAAAATTATCAGAATATTTTTATAAAAGGT ACCAAATTCCAAAAGATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Carbamoyl-phosphate synthetase ammonia chain [H]
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MVKILRTATGCMASISFINELMKKGVEVVCVDANPISVGLHYCRKKYVVPKGNEPNFIPELLKICKKENIDAILSGPEEE IIHISKNKDIFLNEGILPIVSDYETIKITSDKWKTYEFFINNNISTPKTYKLDEIKKEEINFPIVLKPRFGRGGLGIYIA KDMGDFNYIVKKCNSDYIAQEFIEGIEFTIDIFSDMDGNILSVVPRKRLSVESGISVKSEVTYNETIIKYAKEIAEKLNI KGPANIQCILKNNKSYFIEINPRFGGGSILSIRSDPTIIENLIRIVKGEKPIPSKGFKQNLLMLRYYSEIFVEGKHESHN I
Sequences:
>Translated_321_residues MVKILRTATGCMASISFINELMKKGVEVVCVDANPISVGLHYCRKKYVVPKGNEPNFIPELLKICKKENIDAILSGPEEE IIHISKNKDIFLNEGILPIVSDYETIKITSDKWKTYEFFINNNISTPKTYKLDEIKKEEINFPIVLKPRFGRGGLGIYIA KDMGDFNYIVKKCNSDYIAQEFIEGIEFTIDIFSDMDGNILSVVPRKRLSVESGISVKSEVTYNETIIKYAKEIAEKLNI KGPANIQCILKNNKSYFIEINPRFGGGSILSIRSDPTIIENLIRIVKGEKPIPSKGFKQNLLMLRYYSEIFVEGKHESHN I >Mature_321_residues MVKILRTATGCMASISFINELMKKGVEVVCVDANPISVGLHYCRKKYVVPKGNEPNFIPELLKICKKENIDAILSGPEEE IIHISKNKDIFLNEGILPIVSDYETIKITSDKWKTYEFFINNNISTPKTYKLDEIKKEEINFPIVLKPRFGRGGLGIYIA KDMGDFNYIVKKCNSDYIAQEFIEGIEFTIDIFSDMDGNILSVVPRKRLSVESGISVKSEVTYNETIIKYAKEIAEKLNI KGPANIQCILKNNKSYFIEINPRFGGGSILSIRSDPTIIENLIRIVKGEKPIPSKGFKQNLLMLRYYSEIFVEGKHESHN I
Specific function: Arginine biosynthesis. Pyrimidine biosynthesis; first step. [C]
COG id: COG0458
COG function: function code EF; Carbamoylphosphate synthase large subunit (split gene in MJ)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ATP-grasp domains [H]
Homologues:
None
Paralogues:
None
Copy number: 4701 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 3,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR006275 - InterPro: IPR005479 - InterPro: IPR005483 - InterPro: IPR005481 - InterPro: IPR005480 - InterPro: IPR011607 - InterPro: IPR013817 - InterPro: IPR016185 [H]
Pfam domain/function: PF00289 CPSase_L_chain; PF02786 CPSase_L_D2; PF02787 CPSase_L_D3; PF02142 MGS [H]
EC number: =6.3.5.5 [H]
Molecular weight: Translated: 36458; Mature: 36458
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKILRTATGCMASISFINELMKKGVEVVCVDANPISVGLHYCRKKYVVPKGNEPNFIPE CEEEEEHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHEEECCCCCCCCHHHH LLKICKKENIDAILSGPEEEIIHISKNKDIFLNEGILPIVSDYETIKITSDKWKTYEFFI HHHHHHHCCCCEEECCCHHHEEEEECCCEEEEECCCCEEECCCEEEEEECCCCEEEEEEE NNNISTPKTYKLDEIKKEEINFPIVLKPRFGRGGLGIYIAKDMGDFNYIVKKCNSDYIAQ ECCCCCCCEEEHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHCCCCHHHH EFIEGIEFTIDIFSDMDGNILSVVPRKRLSVESGISVKSEVTYNETIIKYAKEIAEKLNI HHHHHHEEEEEEECCCCCCEEEECCCHHCCHHCCCCEEECCCHHHHHHHHHHHHHHHCCC KGPANIQCILKNNKSYFIEINPRFGGGSILSIRSDPTIIENLIRIVKGEKPIPSKGFKQN CCCCCEEEEEECCCEEEEEEECCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHH LLMLRYYSEIFVEGKHESHNI HHHHEEHHHHHEECCCCCCCC >Mature Secondary Structure MVKILRTATGCMASISFINELMKKGVEVVCVDANPISVGLHYCRKKYVVPKGNEPNFIPE CEEEEEHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHEEECCCCCCCCHHHH LLKICKKENIDAILSGPEEEIIHISKNKDIFLNEGILPIVSDYETIKITSDKWKTYEFFI HHHHHHHCCCCEEECCCHHHEEEEECCCEEEEECCCCEEECCCEEEEEECCCCEEEEEEE NNNISTPKTYKLDEIKKEEINFPIVLKPRFGRGGLGIYIAKDMGDFNYIVKKCNSDYIAQ ECCCCCCCEEEHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHCCCCHHHH EFIEGIEFTIDIFSDMDGNILSVVPRKRLSVESGISVKSEVTYNETIIKYAKEIAEKLNI HHHHHHEEEEEEECCCCCCEEEECCCHHCCHHCCCCEEECCCHHHHHHHHHHHHHHHCCC KGPANIQCILKNNKSYFIEINPRFGGGSILSIRSDPTIIENLIRIVKGEKPIPSKGFKQN CCCCCEEEEEECCCEEEEEEECCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHH LLMLRYYSEIFVEGKHESHNI HHHHEEHHHHHEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA