| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150400767
Identifier: 150400767
GI number: 150400767
Start: 352219
End: 353253
Strand: Direct
Name: 150400767
Synonym: Maeo_0333
Alternate gene names: NA
Gene position: 352219-353253 (Clockwise)
Preceding gene: 150400745
Following gene: 150400768
Centisome position: 22.44
GC content: 34.11
Gene sequence:
>1035_bases ATGCCCATTATGGCCCTACTCGGGGTAATTTTATTTTTGAGTATCAGCGGATGTATTAATGACCAAAGTCCTACGGTTAT ATCATCAGAAGGACCTCCCACAGAAGAAAAAGTTATTAATATCTATGCTGCTTACGGTGGATTAGATACGATTGCAGAAG AATTTGAAAAAGATACAGGTATAAAAGTAAATTATGTTTCAATGTCCTCGGGAGAAGCGTTATCTCGGTTGATGGCAGAA AAGAACAATCCTTCATGTGATGTATGGTTCGGTGGAGGTATTGATGCATTTATAAAAGCAAAAAACGAAAAATTATTAAC CTCATATGAATCGCCAAATGCAAAATATATAGATAGTAAATTTGTCGATGAAGAGCATTATTGGACTGGTGTATCCCTTG TTACAATTGGAGTTTTGGAAAATACCCAATTAATTAAAGATAAAAATCTTCCAGAACCAAAAACATGGGATGATTTGATA AAACCAGAATATAAAGGAGAACTCATAGCATCAAATCCAACAATATCTGGAACAGCATATTTCACAATATGTGGAATACT TCAAATGAAAGGAAAAGATGAAGGTTGGATATATCTTGATAAATTTTATGGAAATACTCCATTTTTAACAAAAAGAGGTT CTGGACCTAGCAAAAAAGTTATTTCAGGCGAATATGCTTATGGAGTAGCTCCTGACCCTCATAGTAAAAAAATAAAAAAT CCTGACCTACCTATAAAAGCCATATATCTTGACAAGGTGGTTTGGTGGCCTTCACCAGTTGCAATAATTAAAGACAGTAA ACATCCAAATAATGCAAAGACATTTGTAGATTGGGCATTGTCAGAAAGAGGACAGAAAATTTTAATGAGTGCAAGTCCAA GAGTTCCTGTAAGAAGCGATATAAAAACCCTTGAAGGAGTTCCAAATCCTAGTGAATTAGATTTCATAGATATGGACTTT GTATATTGGGGGGAGCATAGGGATGAAGTATTAAATGAGTGGAAAAATAGATATCAATCAATAACAACACAATAA
Upstream 100 bases:
>100_bases AACTTTATACTATTAGAAAATCTAAATAATAAATTATAAATATTAATATAATTAAAAATGCAGTATATATCATAAATAAG GTGAAATTGTGAAAAAATAC
Downstream 100 bases:
>100_bases ATTATTATTATGTATGGTTGCATATTACAGGGAGCTCCCATGAGGAGTTAATTGAATTCTTTTTTCAATTAATATATATC TATATCTTATACATAATATA
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MPIMALLGVILFLSISGCINDQSPTVISSEGPPTEEKVINIYAAYGGLDTIAEEFEKDTGIKVNYVSMSSGEALSRLMAE KNNPSCDVWFGGGIDAFIKAKNEKLLTSYESPNAKYIDSKFVDEEHYWTGVSLVTIGVLENTQLIKDKNLPEPKTWDDLI KPEYKGELIASNPTISGTAYFTICGILQMKGKDEGWIYLDKFYGNTPFLTKRGSGPSKKVISGEYAYGVAPDPHSKKIKN PDLPIKAIYLDKVVWWPSPVAIIKDSKHPNNAKTFVDWALSERGQKILMSASPRVPVRSDIKTLEGVPNPSELDFIDMDF VYWGEHRDEVLNEWKNRYQSITTQ
Sequences:
>Translated_344_residues MPIMALLGVILFLSISGCINDQSPTVISSEGPPTEEKVINIYAAYGGLDTIAEEFEKDTGIKVNYVSMSSGEALSRLMAE KNNPSCDVWFGGGIDAFIKAKNEKLLTSYESPNAKYIDSKFVDEEHYWTGVSLVTIGVLENTQLIKDKNLPEPKTWDDLI KPEYKGELIASNPTISGTAYFTICGILQMKGKDEGWIYLDKFYGNTPFLTKRGSGPSKKVISGEYAYGVAPDPHSKKIKN PDLPIKAIYLDKVVWWPSPVAIIKDSKHPNNAKTFVDWALSERGQKILMSASPRVPVRSDIKTLEGVPNPSELDFIDMDF VYWGEHRDEVLNEWKNRYQSITTQ >Mature_343_residues PIMALLGVILFLSISGCINDQSPTVISSEGPPTEEKVINIYAAYGGLDTIAEEFEKDTGIKVNYVSMSSGEALSRLMAEK NNPSCDVWFGGGIDAFIKAKNEKLLTSYESPNAKYIDSKFVDEEHYWTGVSLVTIGVLENTQLIKDKNLPEPKTWDDLIK PEYKGELIASNPTISGTAYFTICGILQMKGKDEGWIYLDKFYGNTPFLTKRGSGPSKKVISGEYAYGVAPDPHSKKIKNP DLPIKAIYLDKVVWWPSPVAIIKDSKHPNNAKTFVDWALSERGQKILMSASPRVPVRSDIKTLEGVPNPSELDFIDMDFV YWGEHRDEVLNEWKNRYQSITTQ
Specific function: Unknown
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 38446; Mature: 38315
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIMALLGVILFLSISGCINDQSPTVISSEGPPTEEKVINIYAAYGGLDTIAEEFEKDTG CCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHEEEEEEHHCCHHHHHHHHHHCCC IKVNYVSMSSGEALSRLMAEKNNPSCDVWFGGGIDAFIKAKNEKLLTSYESPNAKYIDSK CEEEEEECCCCHHHHHHHHHCCCCCEEEEECCCEEEEEEECCCEEEEECCCCCCEECCHH FVDEEHYWTGVSLVTIGVLENTQLIKDKNLPEPKTWDDLIKPEYKGELIASNPTISGTAY CCCCCCEECCEEEEEEEEECCCEEECCCCCCCCCCHHHHCCCCCCCEEEECCCCCCCEEH FTICGILQMKGKDEGWIYLDKFYGNTPFLTKRGSGPSKKVISGEYAYGVAPDPHSKKIKN EEEEEEEEECCCCCCEEEEEEECCCCCCEEECCCCCCCCEECCCEEECCCCCCCCCCCCC PDLPIKAIYLDKVVWWPSPVAIIKDSKHPNNAKTFVDWALSERGQKILMSASPRVPVRSD CCCCEEEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHH IKTLEGVPNPSELDFIDMDFVYWGEHRDEVLNEWKNRYQSITTQ HHHHCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PIMALLGVILFLSISGCINDQSPTVISSEGPPTEEKVINIYAAYGGLDTIAEEFEKDTG CHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHEEEEEEHHCCHHHHHHHHHHCCC IKVNYVSMSSGEALSRLMAEKNNPSCDVWFGGGIDAFIKAKNEKLLTSYESPNAKYIDSK CEEEEEECCCCHHHHHHHHHCCCCCEEEEECCCEEEEEEECCCEEEEECCCCCCEECCHH FVDEEHYWTGVSLVTIGVLENTQLIKDKNLPEPKTWDDLIKPEYKGELIASNPTISGTAY CCCCCCEECCEEEEEEEEECCCEEECCCCCCCCCCHHHHCCCCCCCEEEECCCCCCCEEH FTICGILQMKGKDEGWIYLDKFYGNTPFLTKRGSGPSKKVISGEYAYGVAPDPHSKKIKN EEEEEEEEECCCCCCEEEEEEECCCCCCEEECCCCCCCCEECCCEEECCCCCCCCCCCCC PDLPIKAIYLDKVVWWPSPVAIIKDSKHPNNAKTFVDWALSERGQKILMSASPRVPVRSD CCCCEEEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHH IKTLEGVPNPSELDFIDMDFVYWGEHRDEVLNEWKNRYQSITTQ HHHHCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]