| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is yfcB [C]
Identifier: 150400710
GI number: 150400710
Start: 300231
End: 301298
Strand: Reverse
Name: yfcB [C]
Synonym: Maeo_0275
Alternate gene names: 150400710
Gene position: 301298-300231 (Counterclockwise)
Preceding gene: 150400711
Following gene: 150400705
Centisome position: 19.2
GC content: 27.43
Gene sequence:
>1068_bases ATGACAATAACAGAAGTAGAAACAACAATAACAGCAAAAAAAGTGCTTTGCTGCAAAGTTCCCACAAATAAAGGAGAACG AATTAGAAAGATATTGTTGGACAACAACGAACTTAATAAAAATTATAAATTAAAAAAAGAAGATAATTATTTATTTATTC CAATAATTTCCACAGACGAAACTGAAATTGATAAATCTATTATGGAAAATTTAAAAAAAATATACAATAATATAGAATTT ATTGAAATTAATATGTTGGGAAATCCAAAAACTAATAAACTCAATTTTAGGGAATATTTACTTAAAAACTTTAAGAAAGA AATAGAAAATGGGGCCGTAGTATTATCTTATGATATTATTGGAGATATTGTAATTATACAGATATCTGATAATATTGACG AAAACATTGCAAAAAAAATAGGGGCTAAGGCCTTAGAGTTAATACCATCTGTAAAATCCGTATATCGAAGAAAAAGCGAA ATATTGGGAGAATTTCGAGTTAGAGAATTGGAGCTCCTTGCAGGAGAATATAAAACTTTAACGATGTATAAAGAAAATGG ATATAGATTGTGGGTAGATGTGGAAAAAGTTTATTTCTCTCCGAGATTAGGCTGGGAAAGGAAGAGAATAATGGAAAAAG TAAAACCAGAGGATATTGTTGTGGATATGTTTTGCGGAGTTGGTCCTTTCTCAATAGCTTGTAAAAATGCAAAAAAGATA TATGCCATAGATATAAATCCAGACGCCGTGGAGCTCCTTAAAAAGAATATCAAATTAAATAAACTCCAACATAAAATAAT ACCCATAAATAATGATATAAGAAAAACAGAAGTTAAAGGTAATAGAATAATAATGAATCTTCCTAAATTTGCCCATTTAT TTGTAGATACGGCACTGAAAATGGTTGAAAAAAATGGCATAATTCATTATTATACTGTTGGAACAGATTATAATGAAGCC ATAAATTTATTTAAATCAAAATGTAATTGTGAAATAGTTGAAAAAAGAATTGTAAAATCATATTCTCCAAGAGAGCATAT TTTTGTGTTGGATATAAAAATATATTAA
Upstream 100 bases:
>100_bases TAAATCTTAAAAAAGAAAATAAAACACCAAAAGAAATAGCAAAAATAACAGGAATAAATTTAAAAACTGTTGAATACCAC TACTATAAAAAAGTGAGATA
Downstream 100 bases:
>100_bases ATAAATAAGCATTATTATATATTATTTTTCTAATTCGGACAAATCTAAGTCATCCAAATTAGTATTTTTTTCTATTTCCT TTTTTACATCTTTTATTCTT
Product: protein of unknown function Met10
Products: S-adenosyl-L-homocysteine; DNA methylaminopurine [C]
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MTITEVETTITAKKVLCCKVPTNKGERIRKILLDNNELNKNYKLKKEDNYLFIPIISTDETEIDKSIMENLKKIYNNIEF IEINMLGNPKTNKLNFREYLLKNFKKEIENGAVVLSYDIIGDIVIIQISDNIDENIAKKIGAKALELIPSVKSVYRRKSE ILGEFRVRELELLAGEYKTLTMYKENGYRLWVDVEKVYFSPRLGWERKRIMEKVKPEDIVVDMFCGVGPFSIACKNAKKI YAIDINPDAVELLKKNIKLNKLQHKIIPINNDIRKTEVKGNRIIMNLPKFAHLFVDTALKMVEKNGIIHYYTVGTDYNEA INLFKSKCNCEIVEKRIVKSYSPREHIFVLDIKIY
Sequences:
>Translated_355_residues MTITEVETTITAKKVLCCKVPTNKGERIRKILLDNNELNKNYKLKKEDNYLFIPIISTDETEIDKSIMENLKKIYNNIEF IEINMLGNPKTNKLNFREYLLKNFKKEIENGAVVLSYDIIGDIVIIQISDNIDENIAKKIGAKALELIPSVKSVYRRKSE ILGEFRVRELELLAGEYKTLTMYKENGYRLWVDVEKVYFSPRLGWERKRIMEKVKPEDIVVDMFCGVGPFSIACKNAKKI YAIDINPDAVELLKKNIKLNKLQHKIIPINNDIRKTEVKGNRIIMNLPKFAHLFVDTALKMVEKNGIIHYYTVGTDYNEA INLFKSKCNCEIVEKRIVKSYSPREHIFVLDIKIY >Mature_354_residues TITEVETTITAKKVLCCKVPTNKGERIRKILLDNNELNKNYKLKKEDNYLFIPIISTDETEIDKSIMENLKKIYNNIEFI EINMLGNPKTNKLNFREYLLKNFKKEIENGAVVLSYDIIGDIVIIQISDNIDENIAKKIGAKALELIPSVKSVYRRKSEI LGEFRVRELELLAGEYKTLTMYKENGYRLWVDVEKVYFSPRLGWERKRIMEKVKPEDIVVDMFCGVGPFSIACKNAKKIY AIDINPDAVELLKKNIKLNKLQHKIIPINNDIRKTEVKGNRIIMNLPKFAHLFVDTALKMVEKNGIIHYYTVGTDYNEAI NLFKSKCNCEIVEKRIVKSYSPREHIFVLDIKIY
Specific function: Unknown
COG id: COG2520
COG function: function code R; Predicted methyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1557 and to yeast YHR070w [H]
Homologues:
Organism=Homo sapiens, GI145275187, Length=306, Percent_Identity=28.7581699346405, Blast_Score=99, Evalue=5e-21, Organism=Caenorhabditis elegans, GI193207537, Length=263, Percent_Identity=29.6577946768061, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI193207541, Length=230, Percent_Identity=31.304347826087, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI193207539, Length=230, Percent_Identity=31.304347826087, Blast_Score=89, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6321861, Length=209, Percent_Identity=28.2296650717703, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI45551508, Length=201, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003402 [H]
Pfam domain/function: PF02475 Met_10 [H]
EC number: 2.1.1.72 [C]
Molecular weight: Translated: 41323; Mature: 41192
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: PS00539 PYROKININ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTITEVETTITAKKVLCCKVPTNKGERIRKILLDNNELNKNYKLKKEDNYLFIPIISTDE CCEEEEHHHEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCEEEEECCCEEEEEEECCCH TEIDKSIMENLKKIYNNIEFIEINMLGNPKTNKLNFREYLLKNFKKEIENGAVVLSYDII HHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECC GDIVIIQISDNIDENIAKKIGAKALELIPSVKSVYRRKSEILGEFRVRELELLAGEYKTL CCEEEEEECCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE TMYKENGYRLWVDVEKVYFSPRLGWERKRIMEKVKPEDIVVDMFCGVGPFSIACKNAKKI EEEECCCEEEEEEEEEEEECCCCCHHHHHHHHHCCCCCEEEEHHCCCCCCEEEECCCCEE YAIDINPDAVELLKKNIKLNKLQHKIIPINNDIRKTEVKGNRIIMNLPKFAHLFVDTALK EEEECCCHHHHHHHHCCCCEEEEEEEECCCCCCEEEEECCCEEEEECCHHHHHHHHHHHH MVEKNGIIHYYTVGTDYNEAINLFKSKCNCEIVEKRIVKSYSPREHIFVLDIKIY HHHCCCEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEEEEC >Mature Secondary Structure TITEVETTITAKKVLCCKVPTNKGERIRKILLDNNELNKNYKLKKEDNYLFIPIISTDE CEEEEHHHEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCEEEEECCCEEEEEEECCCH TEIDKSIMENLKKIYNNIEFIEINMLGNPKTNKLNFREYLLKNFKKEIENGAVVLSYDII HHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECC GDIVIIQISDNIDENIAKKIGAKALELIPSVKSVYRRKSEILGEFRVRELELLAGEYKTL CCEEEEEECCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE TMYKENGYRLWVDVEKVYFSPRLGWERKRIMEKVKPEDIVVDMFCGVGPFSIACKNAKKI EEEECCCEEEEEEEEEEEECCCCCHHHHHHHHHCCCCCEEEEHHCCCCCCEEEECCCCEE YAIDINPDAVELLKKNIKLNKLQHKIIPINNDIRKTEVKGNRIIMNLPKFAHLFVDTALK EEEECCCHHHHHHHHCCCCEEEEEEEECCCCCCEEEEECCCEEEEECCHHHHHHHHHHHH MVEKNGIIHYYTVGTDYNEAINLFKSKCNCEIVEKRIVKSYSPREHIFVLDIKIY HHHCCCEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-methionine; DNA adenine; DNA [C]
Specific reaction: S-Adenosyl-L-methionine + DNA adenine =S-adenosyl-L-homocysteine + DNA methylaminopurine Protein + DNA = Protein-DNA [C]
General reaction: Methyl group transfer [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]