Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is 150400711

Identifier: 150400711

GI number: 150400711

Start: 301298

End: 301675

Strand: Reverse

Name: 150400711

Synonym: Maeo_0276

Alternate gene names: NA

Gene position: 301675-301298 (Counterclockwise)

Preceding gene: 150400713

Following gene: 150400710

Centisome position: 19.22

GC content: 25.66

Gene sequence:

>378_bases
ATGATAACAATAAGAGGAAAATCTAAAAGGGAGCTCCTTGAAAAAATTGATAATACTGATTTCGGAGAGGAAGAAGAATT
ATATATTAATAAAGAACTAACAAAAGATTTAGCAATTAATATTTTGGAGAGCTCAGATATAGAAAATATATATCTTCCAA
AGTCTATGTATGGTAGAACCAGTAAAAAACTAATAAAAGCACTGGAAGAAATAGAAATTACAATTAAACCAAAAAATACA
CAGACAGGAAGACCTACGGACAAAAAAGAAATAATATTAAATCTTAAAAAAGAAAATAAAACACCAAAAGAAATAGCAAA
AATAACAGGAATAAATTTAAAAACTGTTGAATACCACTACTATAAAAAAGTGAGATAA

Upstream 100 bases:

>100_bases
TATTGGTTATAATGTTAAAATCGTGTGTTTGAAAGTAAGTTTTAACTACCTGTTAGAATTATAAAATAAATATAAATATA
AATATAAATATAAAGATATT

Downstream 100 bases:

>100_bases
TGACAATAACAGAAGTAGAAACAACAATAACAGCAAAAAAAGTGCTTTGCTGCAAAGTTCCCACAAATAAAGGAGAACGA
ATTAGAAAGATATTGTTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MITIRGKSKRELLEKIDNTDFGEEEELYINKELTKDLAINILESSDIENIYLPKSMYGRTSKKLIKALEEIEITIKPKNT
QTGRPTDKKEIILNLKKENKTPKEIAKITGINLKTVEYHYYKKVR

Sequences:

>Translated_125_residues
MITIRGKSKRELLEKIDNTDFGEEEELYINKELTKDLAINILESSDIENIYLPKSMYGRTSKKLIKALEEIEITIKPKNT
QTGRPTDKKEIILNLKKENKTPKEIAKITGINLKTVEYHYYKKVR
>Mature_125_residues
MITIRGKSKRELLEKIDNTDFGEEEELYINKELTKDLAINILESSDIENIYLPKSMYGRTSKKLIKALEEIEITIKPKNT
QTGRPTDKKEIILNLKKENKTPKEIAKITGINLKTVEYHYYKKVR

Specific function: Unknown

COG id: COG1710

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013249
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08281 Sigma70_r4_2 [H]

EC number: NA

Molecular weight: Translated: 14613; Mature: 14613

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITIRGKSKRELLEKIDNTDFGEEEELYINKELTKDLAINILESSDIENIYLPKSMYGRT
CEEECCCCHHHHHHHHCCCCCCCCCEEEECHHHHHHHHEEECCCCCCCEEECCHHHHCCH
SKKLIKALEEIEITIKPKNTQTGRPTDKKEIILNLKKENKTPKEIAKITGINLKTVEYHY
HHHHHHHHHHCEEEECCCCCCCCCCCCCHHEEEEECCCCCCHHHHHHHCCCCEEEEEEEE
YKKVR
EEECC
>Mature Secondary Structure
MITIRGKSKRELLEKIDNTDFGEEEELYINKELTKDLAINILESSDIENIYLPKSMYGRT
CEEECCCCHHHHHHHHCCCCCCCCCEEEECHHHHHHHHEEECCCCCCCEEECCHHHHCCH
SKKLIKALEEIEITIKPKNTQTGRPTDKKEIILNLKKENKTPKEIAKITGINLKTVEYHY
HHHHHHHHHHCEEEECCCCCCCCCCCCCHHEEEEECCCCCCHHHHHHHCCCCEEEEEEEE
YKKVR
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]