| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150400577
Identifier: 150400577
GI number: 150400577
Start: 156221
End: 157600
Strand: Direct
Name: 150400577
Synonym: Maeo_0139
Alternate gene names: NA
Gene position: 156221-157600 (Clockwise)
Preceding gene: 150400576
Following gene: 150400578
Centisome position: 9.95
GC content: 29.13
Gene sequence:
>1380_bases ATGCTAACAAATATGTTTAAAGAAGAAAATTTAATTAAATATAAATCTGTTGTGGAAAAAATAACCAACAAAATAAAAAA TCATGATGGATTAATTAGAATTATAACCCATAATGATGCTGATGGGCTGACATCTGGGGCAATTATTATAAAGTTATTAA CTCGCCAAAACAAAAAATTTCATTTATCTATTGTTGAACAACTTTCGGAGGATTTCATAAATGAATTGGGTAAAGAAAAC ACAATAAACAATATAATAAGCAAAAACGAAAGTAAAGGCAGTGATGACCACAATAACAGCAACAGTGTATTATATATATT TTCTGATATGGGTAGCGGTCAAATAAACAAAATACTTGAAAATAATTTGAACTCCATAATATTAGACCATCATCCCACAG AAATTAACGATATAGAAATAGAGAATATATTACAATTAAATCCCCATATTTTTAAAATAGATGGTTCAAATGAAATCTCT GCAAGTGGTGTTTGCTATTTGGTAGCACGGGAATTTGGATATTATGATTTAAGTGTTTTGGCCATTACAGGGGCAATCGG GGATATGCAACATCTCCCATTTATTGGATTAAATAAATTCATATTAAATGAAGGAATGGAAAAACAGCATATTAATGGAA TTTTACGGGATATAATATATAATTGTTATGATATATCAATAACAGACAGTATATTATTCTCATTTAACCCATATATAAAA GAATTGAAAAAAAGAGAACAAATTATTAATCTATTAAATAAATACAATATTGACCCAAATAAAATATATTTGGACGGCGA GGATAAAAAGAACTTAGAAAAGGCATTAAGTAGCATAAATCCAAATTATATAAATGAACTATATGTTGATAGATACATAA TAAACCACAACGAAAAAGATGGTCATTATTTGATGGAGCTCCTCAACGCCTGTGGTAAAAATGGCAATGCCCAATTGGGA ATTTGCACGGCATTAGGTGATGAAAACTGCATAAAAGAGGCAAAAAAATTAAATTATGAATATAAATTAAATATTGTTGA AGCACTAAATAAATTAAAATTAAACCATAAAGACAATTTCGATTATTTCTTTGGGGAAAAGGGAACAACAGGACTATTGG CAGGACTATTGGCAAAAGATAGACCAATAATGGGCATAAATAAAGATGAGAATTATTATAAAATATCTTCAAGGGGAAAC CATAATTTAGTTAGTAATGGATTAAATCTTACAGAAGTTATGAAATTAACGGAATTGTTTGGAGGTAGTGGGGGAGGTCA TTCCGTGGCGTCCGGCGGTAAAATACCAATAGAATCTTTGGAGGAATTTTTAGATTGGGCTGATGATTTAATTGGAGAAC AACTTAAAAATAATATGTAA
Upstream 100 bases:
>100_bases AGGTCGAAATATCTATAAAATGGGGGATTTTAAATATAAAAGCTCTGCTTTTATTCAATATCCGAAGGATATTGTATATT TTCTCCCAGAGGTCGAAAAT
Downstream 100 bases:
>100_bases TATAGAGTATTTAGAATAATAAATAATTAAATATATAAAATCAAATTTTTTTTAAGATATATTTTTTATATAGTCAATCT TCGGACTGTTTCACGCGCAA
Product: phosphoesterase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MLTNMFKEENLIKYKSVVEKITNKIKNHDGLIRIITHNDADGLTSGAIIIKLLTRQNKKFHLSIVEQLSEDFINELGKEN TINNIISKNESKGSDDHNNSNSVLYIFSDMGSGQINKILENNLNSIILDHHPTEINDIEIENILQLNPHIFKIDGSNEIS ASGVCYLVAREFGYYDLSVLAITGAIGDMQHLPFIGLNKFILNEGMEKQHINGILRDIIYNCYDISITDSILFSFNPYIK ELKKREQIINLLNKYNIDPNKIYLDGEDKKNLEKALSSINPNYINELYVDRYIINHNEKDGHYLMELLNACGKNGNAQLG ICTALGDENCIKEAKKLNYEYKLNIVEALNKLKLNHKDNFDYFFGEKGTTGLLAGLLAKDRPIMGINKDENYYKISSRGN HNLVSNGLNLTEVMKLTELFGGSGGGHSVASGGKIPIESLEEFLDWADDLIGEQLKNNM
Sequences:
>Translated_459_residues MLTNMFKEENLIKYKSVVEKITNKIKNHDGLIRIITHNDADGLTSGAIIIKLLTRQNKKFHLSIVEQLSEDFINELGKEN TINNIISKNESKGSDDHNNSNSVLYIFSDMGSGQINKILENNLNSIILDHHPTEINDIEIENILQLNPHIFKIDGSNEIS ASGVCYLVAREFGYYDLSVLAITGAIGDMQHLPFIGLNKFILNEGMEKQHINGILRDIIYNCYDISITDSILFSFNPYIK ELKKREQIINLLNKYNIDPNKIYLDGEDKKNLEKALSSINPNYINELYVDRYIINHNEKDGHYLMELLNACGKNGNAQLG ICTALGDENCIKEAKKLNYEYKLNIVEALNKLKLNHKDNFDYFFGEKGTTGLLAGLLAKDRPIMGINKDENYYKISSRGN HNLVSNGLNLTEVMKLTELFGGSGGGHSVASGGKIPIESLEEFLDWADDLIGEQLKNNM >Mature_459_residues MLTNMFKEENLIKYKSVVEKITNKIKNHDGLIRIITHNDADGLTSGAIIIKLLTRQNKKFHLSIVEQLSEDFINELGKEN TINNIISKNESKGSDDHNNSNSVLYIFSDMGSGQINKILENNLNSIILDHHPTEINDIEIENILQLNPHIFKIDGSNEIS ASGVCYLVAREFGYYDLSVLAITGAIGDMQHLPFIGLNKFILNEGMEKQHINGILRDIIYNCYDISITDSILFSFNPYIK ELKKREQIINLLNKYNIDPNKIYLDGEDKKNLEKALSSINPNYINELYVDRYIINHNEKDGHYLMELLNACGKNGNAQLG ICTALGDENCIKEAKKLNYEYKLNIVEALNKLKLNHKDNFDYFFGEKGTTGLLAGLLAKDRPIMGINKDENYYKISSRGN HNLVSNGLNLTEVMKLTELFGGSGGGHSVASGGKIPIESLEEFLDWADDLIGEQLKNNM
Specific function: Unknown
COG id: COG0608
COG function: function code L; Single-stranded DNA-specific exonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0977 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003156 - InterPro: IPR001667 [H]
Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]
EC number: NA
Molecular weight: Translated: 51795; Mature: 51795
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTNMFKEENLIKYKSVVEKITNKIKNHDGLIRIITHNDADGLTSGAIIIKLLTRQNKKF CCCCHHHHCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCEE HLSIVEQLSEDFINELGKENTINNIISKNESKGSDDHNNSNSVLYIFSDMGSGQINKILE HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHH NNLNSIILDHHPTEINDIEIENILQLNPHIFKIDGSNEISASGVCYLVAREFGYYDLSVL CCCCEEEECCCCCCCCCCCHHHHEECCCEEEEECCCCCCCCCCEEEEEEHHCCCCEEEEE AITGAIGDMQHLPFIGLNKFILNEGMEKQHINGILRDIIYNCYDISITDSILFSFNPYIK EEECCCCCHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEHHHHHHCCCHHHH ELKKREQIINLLNKYNIDPNKIYLDGEDKKNLEKALSSINPNYINELYVDRYIINHNEKD HHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCC GHYLMELLNACGKNGNAQLGICTALGDENCIKEAKKLNYEYKLNIVEALNKLKLNHKDNF HHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCCCC DYFFGEKGTTGLLAGLLAKDRPIMGINKDENYYKISSRGNHNLVSNGLNLTEVMKLTELF CEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHCCCCHHHHHHHHHHH GGSGGGHSVASGGKIPIESLEEFLDWADDLIGEQLKNNM CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLTNMFKEENLIKYKSVVEKITNKIKNHDGLIRIITHNDADGLTSGAIIIKLLTRQNKKF CCCCHHHHCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCEE HLSIVEQLSEDFINELGKENTINNIISKNESKGSDDHNNSNSVLYIFSDMGSGQINKILE HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHH NNLNSIILDHHPTEINDIEIENILQLNPHIFKIDGSNEISASGVCYLVAREFGYYDLSVL CCCCEEEECCCCCCCCCCCHHHHEECCCEEEEECCCCCCCCCCEEEEEEHHCCCCEEEEE AITGAIGDMQHLPFIGLNKFILNEGMEKQHINGILRDIIYNCYDISITDSILFSFNPYIK EEECCCCCHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEHHHHHHCCCHHHH ELKKREQIINLLNKYNIDPNKIYLDGEDKKNLEKALSSINPNYINELYVDRYIINHNEKD HHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCC GHYLMELLNACGKNGNAQLGICTALGDENCIKEAKKLNYEYKLNIVEALNKLKLNHKDNF HHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCCCC DYFFGEKGTTGLLAGLLAKDRPIMGINKDENYYKISSRGNHNLVSNGLNLTEVMKLTELF CEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHCCCCHHHHHHHHHHH GGSGGGHSVASGGKIPIESLEEFLDWADDLIGEQLKNNM CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]