Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is 150400577

Identifier: 150400577

GI number: 150400577

Start: 156221

End: 157600

Strand: Direct

Name: 150400577

Synonym: Maeo_0139

Alternate gene names: NA

Gene position: 156221-157600 (Clockwise)

Preceding gene: 150400576

Following gene: 150400578

Centisome position: 9.95

GC content: 29.13

Gene sequence:

>1380_bases
ATGCTAACAAATATGTTTAAAGAAGAAAATTTAATTAAATATAAATCTGTTGTGGAAAAAATAACCAACAAAATAAAAAA
TCATGATGGATTAATTAGAATTATAACCCATAATGATGCTGATGGGCTGACATCTGGGGCAATTATTATAAAGTTATTAA
CTCGCCAAAACAAAAAATTTCATTTATCTATTGTTGAACAACTTTCGGAGGATTTCATAAATGAATTGGGTAAAGAAAAC
ACAATAAACAATATAATAAGCAAAAACGAAAGTAAAGGCAGTGATGACCACAATAACAGCAACAGTGTATTATATATATT
TTCTGATATGGGTAGCGGTCAAATAAACAAAATACTTGAAAATAATTTGAACTCCATAATATTAGACCATCATCCCACAG
AAATTAACGATATAGAAATAGAGAATATATTACAATTAAATCCCCATATTTTTAAAATAGATGGTTCAAATGAAATCTCT
GCAAGTGGTGTTTGCTATTTGGTAGCACGGGAATTTGGATATTATGATTTAAGTGTTTTGGCCATTACAGGGGCAATCGG
GGATATGCAACATCTCCCATTTATTGGATTAAATAAATTCATATTAAATGAAGGAATGGAAAAACAGCATATTAATGGAA
TTTTACGGGATATAATATATAATTGTTATGATATATCAATAACAGACAGTATATTATTCTCATTTAACCCATATATAAAA
GAATTGAAAAAAAGAGAACAAATTATTAATCTATTAAATAAATACAATATTGACCCAAATAAAATATATTTGGACGGCGA
GGATAAAAAGAACTTAGAAAAGGCATTAAGTAGCATAAATCCAAATTATATAAATGAACTATATGTTGATAGATACATAA
TAAACCACAACGAAAAAGATGGTCATTATTTGATGGAGCTCCTCAACGCCTGTGGTAAAAATGGCAATGCCCAATTGGGA
ATTTGCACGGCATTAGGTGATGAAAACTGCATAAAAGAGGCAAAAAAATTAAATTATGAATATAAATTAAATATTGTTGA
AGCACTAAATAAATTAAAATTAAACCATAAAGACAATTTCGATTATTTCTTTGGGGAAAAGGGAACAACAGGACTATTGG
CAGGACTATTGGCAAAAGATAGACCAATAATGGGCATAAATAAAGATGAGAATTATTATAAAATATCTTCAAGGGGAAAC
CATAATTTAGTTAGTAATGGATTAAATCTTACAGAAGTTATGAAATTAACGGAATTGTTTGGAGGTAGTGGGGGAGGTCA
TTCCGTGGCGTCCGGCGGTAAAATACCAATAGAATCTTTGGAGGAATTTTTAGATTGGGCTGATGATTTAATTGGAGAAC
AACTTAAAAATAATATGTAA

Upstream 100 bases:

>100_bases
AGGTCGAAATATCTATAAAATGGGGGATTTTAAATATAAAAGCTCTGCTTTTATTCAATATCCGAAGGATATTGTATATT
TTCTCCCAGAGGTCGAAAAT

Downstream 100 bases:

>100_bases
TATAGAGTATTTAGAATAATAAATAATTAAATATATAAAATCAAATTTTTTTTAAGATATATTTTTTATATAGTCAATCT
TCGGACTGTTTCACGCGCAA

Product: phosphoesterase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MLTNMFKEENLIKYKSVVEKITNKIKNHDGLIRIITHNDADGLTSGAIIIKLLTRQNKKFHLSIVEQLSEDFINELGKEN
TINNIISKNESKGSDDHNNSNSVLYIFSDMGSGQINKILENNLNSIILDHHPTEINDIEIENILQLNPHIFKIDGSNEIS
ASGVCYLVAREFGYYDLSVLAITGAIGDMQHLPFIGLNKFILNEGMEKQHINGILRDIIYNCYDISITDSILFSFNPYIK
ELKKREQIINLLNKYNIDPNKIYLDGEDKKNLEKALSSINPNYINELYVDRYIINHNEKDGHYLMELLNACGKNGNAQLG
ICTALGDENCIKEAKKLNYEYKLNIVEALNKLKLNHKDNFDYFFGEKGTTGLLAGLLAKDRPIMGINKDENYYKISSRGN
HNLVSNGLNLTEVMKLTELFGGSGGGHSVASGGKIPIESLEEFLDWADDLIGEQLKNNM

Sequences:

>Translated_459_residues
MLTNMFKEENLIKYKSVVEKITNKIKNHDGLIRIITHNDADGLTSGAIIIKLLTRQNKKFHLSIVEQLSEDFINELGKEN
TINNIISKNESKGSDDHNNSNSVLYIFSDMGSGQINKILENNLNSIILDHHPTEINDIEIENILQLNPHIFKIDGSNEIS
ASGVCYLVAREFGYYDLSVLAITGAIGDMQHLPFIGLNKFILNEGMEKQHINGILRDIIYNCYDISITDSILFSFNPYIK
ELKKREQIINLLNKYNIDPNKIYLDGEDKKNLEKALSSINPNYINELYVDRYIINHNEKDGHYLMELLNACGKNGNAQLG
ICTALGDENCIKEAKKLNYEYKLNIVEALNKLKLNHKDNFDYFFGEKGTTGLLAGLLAKDRPIMGINKDENYYKISSRGN
HNLVSNGLNLTEVMKLTELFGGSGGGHSVASGGKIPIESLEEFLDWADDLIGEQLKNNM
>Mature_459_residues
MLTNMFKEENLIKYKSVVEKITNKIKNHDGLIRIITHNDADGLTSGAIIIKLLTRQNKKFHLSIVEQLSEDFINELGKEN
TINNIISKNESKGSDDHNNSNSVLYIFSDMGSGQINKILENNLNSIILDHHPTEINDIEIENILQLNPHIFKIDGSNEIS
ASGVCYLVAREFGYYDLSVLAITGAIGDMQHLPFIGLNKFILNEGMEKQHINGILRDIIYNCYDISITDSILFSFNPYIK
ELKKREQIINLLNKYNIDPNKIYLDGEDKKNLEKALSSINPNYINELYVDRYIINHNEKDGHYLMELLNACGKNGNAQLG
ICTALGDENCIKEAKKLNYEYKLNIVEALNKLKLNHKDNFDYFFGEKGTTGLLAGLLAKDRPIMGINKDENYYKISSRGN
HNLVSNGLNLTEVMKLTELFGGSGGGHSVASGGKIPIESLEEFLDWADDLIGEQLKNNM

Specific function: Unknown

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0977 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: NA

Molecular weight: Translated: 51795; Mature: 51795

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTNMFKEENLIKYKSVVEKITNKIKNHDGLIRIITHNDADGLTSGAIIIKLLTRQNKKF
CCCCHHHHCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCEE
HLSIVEQLSEDFINELGKENTINNIISKNESKGSDDHNNSNSVLYIFSDMGSGQINKILE
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHH
NNLNSIILDHHPTEINDIEIENILQLNPHIFKIDGSNEISASGVCYLVAREFGYYDLSVL
CCCCEEEECCCCCCCCCCCHHHHEECCCEEEEECCCCCCCCCCEEEEEEHHCCCCEEEEE
AITGAIGDMQHLPFIGLNKFILNEGMEKQHINGILRDIIYNCYDISITDSILFSFNPYIK
EEECCCCCHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEHHHHHHCCCHHHH
ELKKREQIINLLNKYNIDPNKIYLDGEDKKNLEKALSSINPNYINELYVDRYIINHNEKD
HHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCC
GHYLMELLNACGKNGNAQLGICTALGDENCIKEAKKLNYEYKLNIVEALNKLKLNHKDNF
HHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCCCC
DYFFGEKGTTGLLAGLLAKDRPIMGINKDENYYKISSRGNHNLVSNGLNLTEVMKLTELF
CEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHCCCCHHHHHHHHHHH
GGSGGGHSVASGGKIPIESLEEFLDWADDLIGEQLKNNM
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLTNMFKEENLIKYKSVVEKITNKIKNHDGLIRIITHNDADGLTSGAIIIKLLTRQNKKF
CCCCHHHHCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCEE
HLSIVEQLSEDFINELGKENTINNIISKNESKGSDDHNNSNSVLYIFSDMGSGQINKILE
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHH
NNLNSIILDHHPTEINDIEIENILQLNPHIFKIDGSNEISASGVCYLVAREFGYYDLSVL
CCCCEEEECCCCCCCCCCCHHHHEECCCEEEEECCCCCCCCCCEEEEEEHHCCCCEEEEE
AITGAIGDMQHLPFIGLNKFILNEGMEKQHINGILRDIIYNCYDISITDSILFSFNPYIK
EEECCCCCHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEHHHHHHCCCHHHH
ELKKREQIINLLNKYNIDPNKIYLDGEDKKNLEKALSSINPNYINELYVDRYIINHNEKD
HHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCC
GHYLMELLNACGKNGNAQLGICTALGDENCIKEAKKLNYEYKLNIVEALNKLKLNHKDNF
HHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCCCC
DYFFGEKGTTGLLAGLLAKDRPIMGINKDENYYKISSRGNHNLVSNGLNLTEVMKLTELF
CEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHCCCCHHHHHHHHHHH
GGSGGGHSVASGGKIPIESLEEFLDWADDLIGEQLKNNM
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]