Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

Click here to switch to the map view.

The map label for this gene is 150400578

Identifier: 150400578

GI number: 150400578

Start: 158001

End: 159413

Strand: Direct

Name: 150400578

Synonym: Maeo_0140

Alternate gene names: NA

Gene position: 158001-159413 (Clockwise)

Preceding gene: 150400577

Following gene: 150400579

Centisome position: 10.07

GC content: 24.27

Gene sequence:

>1413_bases
ATGAATTGGGAAGGGTATTTGAAAAAAGGAAATGAATATAAAGATAAGGAAGACTACGACAAAGCAATTGAATATTATAA
TGAAGCTTTAAAAAATTATCCATACAAATTTAAATGGCGTATTTTTATAAACTTAGGACATTGTTATTACTTAAAAAAAG
ACTACGACGAAGCAATTAAAAATTATAAGGAAGCCTCAAAAAACGATTATCCAGATAAAGAGAAATGGATTGTTTGTATA
AACTTAGGACAGTGTTATAATTCAAAAAAAGAATATGACAAAGCAATTGAATATTATAAAAAGGGATTAAGGCTAGGTGG
CAAAGAAATTAAAAAATATGGGTACAATAGTGCTATAATTTCAACATATATAGAACTTGAAAATATAGATGATAATGATA
AAAGAAATGAATATTTTGGGTCATTAGTTAAAATTATGGGGGAAATAGACAACTTCAAAGAAGAACTTAAAGTAAATAAT
AATAAAGATAATCCGATTATTGCACATTATACAAAACCACATGTTATTACAGATATGTTAAAATTAAAAGAAAATAAAGA
AGAAAAAGAAAATAAAGAAGATAAAACGCCTTATTTTAGATTGTATGAAGTTTGTTATATGAATGACCCAGAAGAAGGAA
TGACATTAAAAGAAATAATGGAGAAAGAAGATGAAATAACACAACTATATAATATATACGAAGATGAGAATAGTAAAAAG
GATATGAAAAAAGAAAATTACACATTCTTAGGTAGTTTTATTGTAGGGGAAGGAGGTAATGAAAAAGAATATAAAGATAT
TGATAAATTATTTTTATGGAGAACTTATGGAAAAGATGGCGATAAAGAAGAGGCAAAAGGTATTTGCATCTGTATTAATA
AAGAATTCTTTGACCAAAACTCCGATAATTTATCAAATTATCCTATGAATATTAATAATAACGACAATCCGTCTGAAACT
ATTCTTGAATATGGGGAAAATCCTGATGAATTTTGTTTATATAAAGTAATTTATGAAGATACTAATGAATTAATTACCGT
TTTGAAGAAAATTGATAAATATGCCAAAGATTTAGATTTAAAAAACAATAAAATCAAAAAATTATTAAATAGATTATTGG
ACGAACTTAGATATTTAGTAAAATCTAAACACTACACAGAAGAAAAAGAATATAGAATTATAAAAAGATATAATATAAAT
AAAGAAATAGATATAAATGAAATAAATAAAAATAAAATAAAAATAGATTACGATATATTCTCCCCAAGATTATATATTGA
AATAGAAAAAGATTTCACAGAATACATCGATAAAATTGTATTGGGTCCAAGACTGGAAAATAAAGATTCGTGGAAATCAT
ATTTAAATTATAAGGATATAGATGTTATGGAATCAACATGCCCATTTAAATAA

Upstream 100 bases:

>100_bases
TTGAAGACTAACTATAATTTATTAAAATAAAGATAAATTTAAATGTTATTAAGGGAATATTTAACAATATCTATAATTTA
TATAAAGTGGAGCGGTTATT

Downstream 100 bases:

>100_bases
TTCCCTAAAATAATAAAAGGTGATACCTTGCGAGTTTTTGAAGTGGAGAGGACAACAAATGAAACAAATATAAAATTAAG
ATTAAACATAGATGGGACTG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MNWEGYLKKGNEYKDKEDYDKAIEYYNEALKNYPYKFKWRIFINLGHCYYLKKDYDEAIKNYKEASKNDYPDKEKWIVCI
NLGQCYNSKKEYDKAIEYYKKGLRLGGKEIKKYGYNSAIISTYIELENIDDNDKRNEYFGSLVKIMGEIDNFKEELKVNN
NKDNPIIAHYTKPHVITDMLKLKENKEEKENKEDKTPYFRLYEVCYMNDPEEGMTLKEIMEKEDEITQLYNIYEDENSKK
DMKKENYTFLGSFIVGEGGNEKEYKDIDKLFLWRTYGKDGDKEEAKGICICINKEFFDQNSDNLSNYPMNINNNDNPSET
ILEYGENPDEFCLYKVIYEDTNELITVLKKIDKYAKDLDLKNNKIKKLLNRLLDELRYLVKSKHYTEEKEYRIIKRYNIN
KEIDINEINKNKIKIDYDIFSPRLYIEIEKDFTEYIDKIVLGPRLENKDSWKSYLNYKDIDVMESTCPFK

Sequences:

>Translated_470_residues
MNWEGYLKKGNEYKDKEDYDKAIEYYNEALKNYPYKFKWRIFINLGHCYYLKKDYDEAIKNYKEASKNDYPDKEKWIVCI
NLGQCYNSKKEYDKAIEYYKKGLRLGGKEIKKYGYNSAIISTYIELENIDDNDKRNEYFGSLVKIMGEIDNFKEELKVNN
NKDNPIIAHYTKPHVITDMLKLKENKEEKENKEDKTPYFRLYEVCYMNDPEEGMTLKEIMEKEDEITQLYNIYEDENSKK
DMKKENYTFLGSFIVGEGGNEKEYKDIDKLFLWRTYGKDGDKEEAKGICICINKEFFDQNSDNLSNYPMNINNNDNPSET
ILEYGENPDEFCLYKVIYEDTNELITVLKKIDKYAKDLDLKNNKIKKLLNRLLDELRYLVKSKHYTEEKEYRIIKRYNIN
KEIDINEINKNKIKIDYDIFSPRLYIEIEKDFTEYIDKIVLGPRLENKDSWKSYLNYKDIDVMESTCPFK
>Mature_470_residues
MNWEGYLKKGNEYKDKEDYDKAIEYYNEALKNYPYKFKWRIFINLGHCYYLKKDYDEAIKNYKEASKNDYPDKEKWIVCI
NLGQCYNSKKEYDKAIEYYKKGLRLGGKEIKKYGYNSAIISTYIELENIDDNDKRNEYFGSLVKIMGEIDNFKEELKVNN
NKDNPIIAHYTKPHVITDMLKLKENKEEKENKEDKTPYFRLYEVCYMNDPEEGMTLKEIMEKEDEITQLYNIYEDENSKK
DMKKENYTFLGSFIVGEGGNEKEYKDIDKLFLWRTYGKDGDKEEAKGICICINKEFFDQNSDNLSNYPMNINNNDNPSET
ILEYGENPDEFCLYKVIYEDTNELITVLKKIDKYAKDLDLKNNKIKKLLNRLLDELRYLVKSKHYTEEKEYRIIKRYNIN
KEIDINEINKNKIKIDYDIFSPRLYIEIEKDFTEYIDKIVLGPRLENKDSWKSYLNYKDIDVMESTCPFK

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56548; Mature: 56548

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWEGYLKKGNEYKDKEDYDKAIEYYNEALKNYPYKFKWRIFINLGHCYYLKKDYDEAIK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCEEEEHHHHHHHHH
NYKEASKNDYPDKEKWIVCINLGQCYNSKKEYDKAIEYYKKGLRLGGKEIKKYGYNSAII
HHHHHCCCCCCCCCCEEEEEECCHHHCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHH
STYIELENIDDNDKRNEYFGSLVKIMGEIDNFKEELKVNNNKDNPIIAHYTKPHVITDML
HHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHH
KLKENKEEKENKEDKTPYFRLYEVCYMNDPEEGMTLKEIMEKEDEITQLYNIYEDENSKK
HHHHCCHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHH
DMKKENYTFLGSFIVGEGGNEKEYKDIDKLFLWRTYGKDGDKEEAKGICICINKEFFDQN
HHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCEEEEEECHHHCCCC
SDNLSNYPMNINNNDNPSETILEYGENPDEFCLYKVIYEDTNELITVLKKIDKYAKDLDL
CCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KNNKIKKLLNRLLDELRYLVKSKHYTEEKEYRIIKRYNINKEIDINEINKNKIKIDYDIF
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEECCCCCCCCEECCCCEEEEEEEEE
SPRLYIEIEKDFTEYIDKIVLGPRLENKDSWKSYLNYKDIDVMESTCPFK
CCEEEEEECHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHCCCCCC
>Mature Secondary Structure
MNWEGYLKKGNEYKDKEDYDKAIEYYNEALKNYPYKFKWRIFINLGHCYYLKKDYDEAIK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCEEEEHHHHHHHHH
NYKEASKNDYPDKEKWIVCINLGQCYNSKKEYDKAIEYYKKGLRLGGKEIKKYGYNSAII
HHHHHCCCCCCCCCCEEEEEECCHHHCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHH
STYIELENIDDNDKRNEYFGSLVKIMGEIDNFKEELKVNNNKDNPIIAHYTKPHVITDML
HHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHH
KLKENKEEKENKEDKTPYFRLYEVCYMNDPEEGMTLKEIMEKEDEITQLYNIYEDENSKK
HHHHCCHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHH
DMKKENYTFLGSFIVGEGGNEKEYKDIDKLFLWRTYGKDGDKEEAKGICICINKEFFDQN
HHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCEEEEEECHHHCCCC
SDNLSNYPMNINNNDNPSETILEYGENPDEFCLYKVIYEDTNELITVLKKIDKYAKDLDL
CCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KNNKIKKLLNRLLDELRYLVKSKHYTEEKEYRIIKRYNINKEIDINEINKNKIKIDYDIF
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEECCCCCCCCEECCCCEEEEEEEEE
SPRLYIEIEKDFTEYIDKIVLGPRLENKDSWKSYLNYKDIDVMESTCPFK
CCEEEEEECHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA