Click here to switch to the map view.

The map label for this gene is 150400573

Identifier: 150400573

GI number: 150400573

Start: 152771

End: 153565

Strand: Direct

Name: 150400573

Synonym: Maeo_0135

Alternate gene names: NA

Gene position: 152771-153565 (Clockwise)

Preceding gene: 150400572

Following gene: 150400574

Centisome position: 9.73

GC content: 29.81

Gene sequence:

>795_bases
ATGAAACTTAAATTAAGTGTTCCACAATGGCATTATAGTATGCTTCTTGACACGGACAGAGTAGCAGTTTTTAAAGAAGC
TATTGAGCAAACAGTAAAACCTAATGACATAGTTTATGATTTGGGAACAGGTAGCGGAATATTGGCAATGGTGGCATCTC
AAAAGGCAAAAAAAGTTTATGCCTTAGAGCTTGACCCAATAACCTGCATGTATGCAAAAGAAAATTTAAAAATAAATGAT
TATGAAAATATTAAAAATATAAATTTAATAGAGGCTGATGCTTCCGAATATAATTTTAAGGAACAGGCTGATGTAATTAT
AGCGGAATTGCTTGATACAGCATTAATAACGGAGCCACAAGTTCCCGTATTAAATTCCATTATTGAAAAAGGATATTTAA
AAGAAAATGGAAAAATTATTCCTGAAAAGGCATATAACACGGCACAAATAGTAATTGCAAAAATGGGACATATTTATTAT
GATGAAGAAGTGGTATCAAAATCGGTTTCGGAAGAAATACTATATGATACAATTGATTTTTATAAAATAAATAAAGAGGA
AGTTAGTTATAATTTACAATTTAAATTAAATGAAGACTACAACGGAGAAACAAATTTAGGAATTAGATTAAATACTTACA
CAGAATTAACAAAAGACATAATGTCAGGGAGCTCCCCTATGTTAAATCCTCCGTTAATAATTCCCATAGAAAACCCAGTA
ATTAAAGATAATATAATAAACCTAACCTTGTCATACAAAATGGGCGGAGATTTGGAAAGTATAACTATAAAATAA

Upstream 100 bases:

>100_bases
TAATTTTACATTATTTATACATTATTTATGATATTTTTTTATATTATTATTTTTATATATTTTTTGGAATATACAATATA
CAAACTTTTTTAGTGATATT

Downstream 100 bases:

>100_bases
TACCTATGGTGAAAACATTAAAAAAACAAAAATTGCCATACTTTGCCACAAAAGAACACCAGAAAACGAAATGATTTATG
AAAAATTAAAAAACAATAAT

Product: putative RNA methylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MKLKLSVPQWHYSMLLDTDRVAVFKEAIEQTVKPNDIVYDLGTGSGILAMVASQKAKKVYALELDPITCMYAKENLKIND
YENIKNINLIEADASEYNFKEQADVIIAELLDTALITEPQVPVLNSIIEKGYLKENGKIIPEKAYNTAQIVIAKMGHIYY
DEEVVSKSVSEEILYDTIDFYKINKEEVSYNLQFKLNEDYNGETNLGIRLNTYTELTKDIMSGSSPMLNPPLIIPIENPV
IKDNIINLTLSYKMGGDLESITIK

Sequences:

>Translated_264_residues
MKLKLSVPQWHYSMLLDTDRVAVFKEAIEQTVKPNDIVYDLGTGSGILAMVASQKAKKVYALELDPITCMYAKENLKIND
YENIKNINLIEADASEYNFKEQADVIIAELLDTALITEPQVPVLNSIIEKGYLKENGKIIPEKAYNTAQIVIAKMGHIYY
DEEVVSKSVSEEILYDTIDFYKINKEEVSYNLQFKLNEDYNGETNLGIRLNTYTELTKDIMSGSSPMLNPPLIIPIENPV
IKDNIINLTLSYKMGGDLESITIK
>Mature_264_residues
MKLKLSVPQWHYSMLLDTDRVAVFKEAIEQTVKPNDIVYDLGTGSGILAMVASQKAKKVYALELDPITCMYAKENLKIND
YENIKNINLIEADASEYNFKEQADVIIAELLDTALITEPQVPVLNSIIEKGYLKENGKIIPEKAYNTAQIVIAKMGHIYY
DEEVVSKSVSEEILYDTIDFYKINKEEVSYNLQFKLNEDYNGETNLGIRLNTYTELTKDIMSGSSPMLNPPLIIPIENPV
IKDNIINLTLSYKMGGDLESITIK

Specific function: Unknown

COG id: COG4076

COG function: function code R; Predicted RNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.thermoautotrophicum MTH738 [H]

Homologues:

Organism=Caenorhabditis elegans, GI115532940, Length=112, Percent_Identity=34.8214285714286, Blast_Score=74, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010456
- InterPro:   IPR021172 [H]

Pfam domain/function: PF06325 PrmA [H]

EC number: NA

Molecular weight: Translated: 29859; Mature: 29859

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKLSVPQWHYSMLLDTDRVAVFKEAIEQTVKPNDIVYDLGTGSGILAMVASQKAKKVY
CEEEECCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEECCCCCCEEE
ALELDPITCMYAKENLKINDYENIKNINLIEADASEYNFKEQADVIIAELLDTALITEPQ
EEEECCEEEEEECCCCEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCC
VPVLNSIIEKGYLKENGKIIPEKAYNTAQIVIAKMGHIYYDEEVVSKSVSEEILYDTIDF
CHHHHHHHHCCCCCCCCEECCCCCCCHHEEEEEHHCCEEECHHHHHHHHHHHHHHHHHHE
YKINKEEVSYNLQFKLNEDYNGETNLGIRLNTYTELTKDIMSGSSPMLNPPLIIPIENPV
EEECHHHEEEEEEEEECCCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCEEEECCCCE
IKDNIINLTLSYKMGGDLESITIK
ECCCEEEEEEEEEECCCEEEEEEC
>Mature Secondary Structure
MKLKLSVPQWHYSMLLDTDRVAVFKEAIEQTVKPNDIVYDLGTGSGILAMVASQKAKKVY
CEEEECCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEECCCCCCEEE
ALELDPITCMYAKENLKINDYENIKNINLIEADASEYNFKEQADVIIAELLDTALITEPQ
EEEECCEEEEEECCCCEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCC
VPVLNSIIEKGYLKENGKIIPEKAYNTAQIVIAKMGHIYYDEEVVSKSVSEEILYDTIDF
CHHHHHHHHCCCCCCCCEECCCCCCCHHEEEEEHHCCEEECHHHHHHHHHHHHHHHHHHE
YKINKEEVSYNLQFKLNEDYNGETNLGIRLNTYTELTKDIMSGSSPMLNPPLIIPIENPV
EEECHHHEEEEEEEEECCCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCEEEECCCCE
IKDNIINLTLSYKMGGDLESITIK
ECCCEEEEEEEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]