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The map label for this gene is rps28e

Identifier: 150400518

GI number: 150400518

Start: 83195

End: 83422

Strand: Reverse

Name: rps28e

Synonym: Maeo_0080

Alternate gene names: 150400518

Gene position: 83422-83195 (Counterclockwise)

Preceding gene: 150400519

Following gene: 150400517

Centisome position: 5.32

GC content: 37.72

Gene sequence:

>228_bases
ATGTCTGATGACATGATTTATAAAGAAGCAATAGCCGCAGAAGTTCTTCAAGTAACAGGAAGAACTGGTGTGACTGGGGA
AATTTTCCAAGTAAGATGTAAAATCTTAGGAGGAAAAGACACAGGAAGAATATTGACAAGAAATATAAAAGGTCCTATCA
AAGTAGGAGACATTATTATGCTCAGAGAAACCGAAAGAGAAGCGAAAGCTCTCGGAAGGAGAAGATAG

Upstream 100 bases:

>100_bases
TTCAACAGCAGCAGTAGCAATTATCGCAGAAAAAGATGCAAATGCTTTAAAAGACTTAGTAGAAAAAATAAACGGTTTAA
AGGCATAATTAGGTGATTGA

Downstream 100 bases:

>100_bases
GTGAGATTAGATGGAATGGAAAACCTGCAATTTTTGTGGAAAAAGCATAGAACCAGGAACTGGTAAAAAGTTCGTAAAAA
AAGATGGTTCAGTTATGTTT

Product: 30S ribosomal protein S28e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 74

Protein sequence:

>75_residues
MSDDMIYKEAIAAEVLQVTGRTGVTGEIFQVRCKILGGKDTGRILTRNIKGPIKVGDIIMLRETEREAKALGRRR

Sequences:

>Translated_75_residues
MSDDMIYKEAIAAEVLQVTGRTGVTGEIFQVRCKILGGKDTGRILTRNIKGPIKVGDIIMLRETEREAKALGRRR
>Mature_74_residues
SDDMIYKEAIAAEVLQVTGRTGVTGEIFQVRCKILGGKDTGRILTRNIKGPIKVGDIIMLRETEREAKALGRRR

Specific function: Unknown

COG id: COG2053

COG function: function code J; Ribosomal protein S28E/S33

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S28e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS28_META3 (A6UT50)

Other databases:

- EMBL:   CP000743
- RefSeq:   YP_001324284.1
- ProteinModelPortal:   A6UT50
- SMR:   A6UT50
- STRING:   A6UT50
- GeneID:   5326630
- GenomeReviews:   CP000743_GR
- KEGG:   mae:Maeo_0080
- eggNOG:   arNOG12932
- HOGENOM:   HBG392125
- OMA:   SEREARC
- ProtClustDB:   PRK04007
- BioCyc:   MAEO419665:MAEO_0080-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00292
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000289
- InterPro:   IPR022836
- Gene3D:   G3DSA:2.40.50.140
- PANTHER:   PTHR10769
- ProDom:   PD005541

Pfam domain/function: PF01200 Ribosomal_S28e; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 8345; Mature: 8214

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: PS00961 RIBOSOMAL_S28E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDMIYKEAIAAEVLQVTGRTGVTGEIFQVRCKILGGKDTGRILTRNIKGPIKVGDIIM
CCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCEEEECCCCCEEECCEEE
LRETEREAKALGRRR
EECCCHHHHHCCCCC
>Mature Secondary Structure 
SDDMIYKEAIAAEVLQVTGRTGVTGEIFQVRCKILGGKDTGRILTRNIKGPIKVGDIIM
CCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCEEEECCCCCEEECCEEE
LRETEREAKALGRRR
EECCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA