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The map label for this gene is rpl7ae

Identifier: 150400519

GI number: 150400519

Start: 83435

End: 83788

Strand: Reverse

Name: rpl7ae

Synonym: Maeo_0081

Alternate gene names: 150400519

Gene position: 83788-83435 (Counterclockwise)

Preceding gene: 150400524

Following gene: 150400518

Centisome position: 5.34

GC content: 33.05

Gene sequence:

>354_bases
ATGGCAGTATATGTAAAATTTGATGTTCCACAAGAAATGGAAGAAAAAACAGCAGAAGTGCTCTCAAAAAGCGAAAAAGT
TAAAAAAGGAGCAAACGAAGTAACAAAAGCAGTAGAAAGAGGAACTGCAAAATTAGTAGTTTTAGCAAAAGATGTTCAAC
CAGAAGAAATTGTTGCGCACATACCTATAATCTGTGAAGAAAAAGGTATCCCATACACATACATAGCAACAAAAGAAGAT
TTAGGTAAAGCTATTGGATTAGAAGTTTCAACAGCAGCAGTAGCAATTATCGCAGAAAAAGATGCAAATGCTTTAAAAGA
CTTAGTAGAAAAAATAAACGGTTTAAAGGCATAA

Upstream 100 bases:

>100_bases
GTGGGCATGGCTACACTATTAAAACCAATAATAAAATGGTAATAATGGTGTAGGTATCCGGATAAAATATCTTTTTTAAA
AAATGAAGGAGGTCATTATT

Downstream 100 bases:

>100_bases
TTAGGTGATTGAATGTCTGATGACATGATTTATAAAGAAGCAATAGCCGCAGAAGTTCTTCAAGTAACAGGAAGAACTGG
TGTGACTGGGGAAATTTTCC

Product: 50S ribosomal protein L7Ae

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MAVYVKFDVPQEMEEKTAEVLSKSEKVKKGANEVTKAVERGTAKLVVLAKDVQPEEIVAHIPIICEEKGIPYTYIATKED
LGKAIGLEVSTAAVAIIAEKDANALKDLVEKINGLKA

Sequences:

>Translated_117_residues
MAVYVKFDVPQEMEEKTAEVLSKSEKVKKGANEVTKAVERGTAKLVVLAKDVQPEEIVAHIPIICEEKGIPYTYIATKED
LGKAIGLEVSTAAVAIIAEKDANALKDLVEKINGLKA
>Mature_116_residues
AVYVKFDVPQEMEEKTAEVLSKSEKVKKGANEVTKAVERGTAKLVVLAKDVQPEEIVAHIPIICEEKGIPYTYIATKEDL
GKAIGLEVSTAAVAIIAEKDANALKDLVEKINGLKA

Specific function: Multifunctional RNA-binding protein that recognizes the K-turn motif in ribosomal RNA, box H/ACA, box C/D and box C'/D' sRNAs

COG id: COG1358

COG function: function code J; Ribosomal protein HS6-type (S12/L30/L7a)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L7Ae family

Homologues:

Organism=Homo sapiens, GI4826860, Length=72, Percent_Identity=38.8888888888889, Blast_Score=77, Evalue=2e-15,
Organism=Homo sapiens, GI51317376, Length=72, Percent_Identity=38.8888888888889, Blast_Score=77, Evalue=2e-15,
Organism=Homo sapiens, GI8923444, Length=94, Percent_Identity=34.0425531914894, Blast_Score=69, Evalue=9e-13,
Organism=Homo sapiens, GI4506661, Length=120, Percent_Identity=33.3333333333333, Blast_Score=64, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI32565833, Length=110, Percent_Identity=36.3636363636364, Blast_Score=73, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI32565827, Length=101, Percent_Identity=39.6039603960396, Blast_Score=72, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17535189, Length=88, Percent_Identity=39.7727272727273, Blast_Score=64, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6320809, Length=82, Percent_Identity=40.2439024390244, Blast_Score=78, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6319993, Length=92, Percent_Identity=40.2173913043478, Blast_Score=77, Evalue=5e-16,
Organism=Drosophila melanogaster, GI17864298, Length=72, Percent_Identity=43.0555555555556, Blast_Score=79, Evalue=7e-16,
Organism=Drosophila melanogaster, GI21356151, Length=84, Percent_Identity=35.7142857142857, Blast_Score=69, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL7A_META3 (A6UT51)

Other databases:

- EMBL:   CP000743
- RefSeq:   YP_001324285.1
- ProteinModelPortal:   A6UT51
- SMR:   A6UT51
- STRING:   A6UT51
- GeneID:   5327321
- GenomeReviews:   CP000743_GR
- KEGG:   mae:Maeo_0081
- eggNOG:   arNOG10239
- HOGENOM:   HBG739027
- OMA:   GTNEATK
- ProtClustDB:   PRK04175
- BioCyc:   MAEO419665:MAEO_0081-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00326
- InterPro:   IPR004038
- InterPro:   IPR018492
- InterPro:   IPR022481
- InterPro:   IPR000948
- PRINTS:   PR00881
- PRINTS:   PR00884
- TIGRFAMs:   TIGR03677

Pfam domain/function: PF01248 Ribosomal_L7Ae

EC number: NA

Molecular weight: Translated: 12636; Mature: 12505

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS01082 RIBOSOMAL_L7AE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVYVKFDVPQEMEEKTAEVLSKSEKVKKGANEVTKAVERGTAKLVVLAKDVQPEEIVAH
CEEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEEECCCCHHHHHHH
IPIICEEKGIPYTYIATKEDLGKAIGLEVSTAAVAIIAEKDANALKDLVEKINGLKA
CCEEECCCCCCEEEEECHHHHHHHHCCEECHHEEEEEECCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AVYVKFDVPQEMEEKTAEVLSKSEKVKKGANEVTKAVERGTAKLVVLAKDVQPEEIVAH
EEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEEECCCCHHHHHHH
IPIICEEKGIPYTYIATKEDLGKAIGLEVSTAAVAIIAEKDANALKDLVEKINGLKA
CCEEECCCCCCEEEEECHHHHHHHHCCEECHHEEEEEECCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA